Protein–RNA interactions for Protein: Q9BYV2

TRIM54, Tripartite motif-containing protein 54, humanhuman

Predictions only

Length 358 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM54Q9BYV2 POLR2H-204ENST00000438240 994 ntTSL 3 BASIC20.77■□□□□ 0.92
TRIM54Q9BYV2 AL390816.2-201ENST00000554252 737 ntTSL 3 BASIC20.77■□□□□ 0.92
TRIM54Q9BYV2 AC012414.1-201ENST00000556676 535 ntBASIC20.77■□□□□ 0.92
TRIM54Q9BYV2 SMPD2-201ENST00000258052 1645 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
TRIM54Q9BYV2 SERBP1-202ENST00000370990 1621 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.92
TRIM54Q9BYV2 KRT18P55-201ENST00000577198 1950 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
TRIM54Q9BYV2 AC079328.2-202ENST00000560903 1410 ntTSL 1 (best) BASIC20.77■□□□□ 0.91
TRIM54Q9BYV2 AC135048.1-201ENST00000566056 1318 ntTSL 2 BASIC20.77■□□□□ 0.91
TRIM54Q9BYV2 ZFAND6-224ENST00000618205 1659 ntAPPRIS P1 TSL 5 BASIC20.77■□□□□ 0.91
TRIM54Q9BYV2 MAPK8IP1P2-201ENST00000580257 1472 ntBASIC20.76■□□□□ 0.91
TRIM54Q9BYV2 TTYH1-201ENST00000301194 2088 ntAPPRIS ALT1 TSL 1 (best) BASIC20.76■□□□□ 0.91
TRIM54Q9BYV2 MTX2-201ENST00000249442 1364 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
TRIM54Q9BYV2 FGF2-201ENST00000264498 6775 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
TRIM54Q9BYV2 ORAI3-201ENST00000318663 2206 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
TRIM54Q9BYV2 RHOF-204ENST00000537265 699 ntTSL 2 BASIC20.76■□□□□ 0.91
TRIM54Q9BYV2 FBXO33-202ENST00000554190 534 ntTSL 3 BASIC20.76■□□□□ 0.91
TRIM54Q9BYV2 MRM1-203ENST00000612760 1284 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
TRIM54Q9BYV2 ANKRD53-204ENST00000457410 1671 ntTSL 5 BASIC20.76■□□□□ 0.91
TRIM54Q9BYV2 AC005224.4-201ENST00000583262 1652 ntBASIC20.76■□□□□ 0.91
TRIM54Q9BYV2 SPRTN-201ENST00000008440 1667 ntTSL 2 BASIC20.76■□□□□ 0.91
TRIM54Q9BYV2 B4GALT5-201ENST00000371711 4722 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
TRIM54Q9BYV2 COMMD5-207ENST00000543949 1571 ntAPPRIS P1 TSL 3 BASIC20.76■□□□□ 0.91
TRIM54Q9BYV2 MFF-203ENST00000349901 1716 ntTSL 2 BASIC20.75■□□□□ 0.91
TRIM54Q9BYV2 P4HTM-202ENST00000383729 2127 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
TRIM54Q9BYV2 QKI-201ENST00000275262 6964 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
TRIM54Q9BYV2 GFI1-203ENST00000427103 2693 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
TRIM54Q9BYV2 MCAT-201ENST00000290429 2056 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
TRIM54Q9BYV2 NME4-201ENST00000219479 995 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
TRIM54Q9BYV2 IRS3P-201ENST00000223076 1006 ntBASIC20.75■□□□□ 0.91
TRIM54Q9BYV2 NME4-202ENST00000382940 766 ntTSL 3 BASIC20.75■□□□□ 0.91
TRIM54Q9BYV2 CALM1-202ENST00000447653 1104 ntAPPRIS ALT1 TSL 2 BASIC20.75■□□□□ 0.91
TRIM54Q9BYV2 AC105265.2-201ENST00000467189 838 ntBASIC20.75■□□□□ 0.91
TRIM54Q9BYV2 AC005775.1-201ENST00000592413 850 ntTSL 5 BASIC20.75■□□□□ 0.91
TRIM54Q9BYV2 NME4-211ENST00000620944 1193 ntTSL 2 BASIC20.75■□□□□ 0.91
TRIM54Q9BYV2 EPHX3-204ENST00000602233 1805 ntAPPRIS P1 TSL 5 BASIC20.75■□□□□ 0.91
TRIM54Q9BYV2 TBL1Y-202ENST00000355162 2376 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
TRIM54Q9BYV2 CCNL1-203ENST00000461804 1998 ntTSL 2 BASIC20.75■□□□□ 0.91
TRIM54Q9BYV2 MARK2-204ENST00000402010 4728 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
TRIM54Q9BYV2 HLA-DPB1-211ENST00000418931 1560 ntAPPRIS P2 BASIC20.75■□□□□ 0.91
TRIM54Q9BYV2 Z98882.1-201ENST00000622160 2253 ntBASIC20.75■□□□□ 0.91
TRIM54Q9BYV2 SNX7-201ENST00000306121 1734 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
TRIM54Q9BYV2 TPTEP1-205ENST00000558085 1738 ntTSL 2 BASIC20.75■□□□□ 0.91
TRIM54Q9BYV2 GGA2-211ENST00000567468 1713 ntTSL 2 BASIC20.75■□□□□ 0.91
TRIM54Q9BYV2 CTCF-202ENST00000401394 2978 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
TRIM54Q9BYV2 DCAF4-202ENST00000358377 2024 ntAPPRIS P4 TSL 1 (best) BASIC20.75■□□□□ 0.91
TRIM54Q9BYV2 PPP2R5E-204ENST00000555899 2164 ntAPPRIS ALT1 TSL 1 (best) BASIC20.75■□□□□ 0.91
TRIM54Q9BYV2 PXK-203ENST00000383715 1756 ntTSL 5 BASIC20.74■□□□□ 0.91
TRIM54Q9BYV2 DRD2-202ENST00000362072 2789 ntAPPRIS P2 TSL 1 (best) BASIC20.74■□□□□ 0.91
TRIM54Q9BYV2 STK11-205ENST00000586243 2777 ntAPPRIS ALT2 TSL 5 BASIC20.74■□□□□ 0.91
TRIM54Q9BYV2 C1QL4-201ENST00000334221 2071 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
TRIM54Q9BYV2 LAYN-201ENST00000375614 2066 ntAPPRIS P3 TSL 1 (best) BASIC20.74■□□□□ 0.91
TRIM54Q9BYV2 CHRNA7-203ENST00000454250 2093 ntAPPRIS ALT2 TSL 2 BASIC20.74■□□□□ 0.91
TRIM54Q9BYV2 IFNGR2-203ENST00000405436 1684 ntTSL 5 BASIC20.74■□□□□ 0.91
TRIM54Q9BYV2 CCDC189-206ENST00000543610 1967 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
TRIM54Q9BYV2 ARID4B-203ENST00000366603 5946 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
TRIM54Q9BYV2 FAM66D-201ENST00000434078 918 ntTSL 5 BASIC20.74■□□□□ 0.91
TRIM54Q9BYV2 DOCK5-208ENST00000481100 2166 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
TRIM54Q9BYV2 STOX2-205ENST00000513034 807 ntTSL 3 BASIC20.74■□□□□ 0.91
TRIM54Q9BYV2 MED17-221ENST00000639724 2317 ntTSL 5 BASIC20.74■□□□□ 0.91
TRIM54Q9BYV2 TMC6-212ENST00000589553 2389 ntTSL 2 BASIC20.74■□□□□ 0.91
TRIM54Q9BYV2 NEU4-204ENST00000405370 1907 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
TRIM54Q9BYV2 TANGO2-212ENST00000434570 2180 ntTSL 2 BASIC20.73■□□□□ 0.91
TRIM54Q9BYV2 GPR157-201ENST00000377411 5265 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
TRIM54Q9BYV2 PBX4-201ENST00000251203 1724 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
TRIM54Q9BYV2 NABP2-202ENST00000341463 1411 ntAPPRIS P1 TSL 3 BASIC20.73■□□□□ 0.91
TRIM54Q9BYV2 KCNQ5-207ENST00000403813 6539 ntAPPRIS ALT2 TSL 5 BASIC20.73■□□□□ 0.91
TRIM54Q9BYV2 SEC61A2-205ENST00000379033 2462 ntTSL 2 BASIC20.73■□□□□ 0.91
TRIM54Q9BYV2 MBNL3-202ENST00000370844 1643 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
TRIM54Q9BYV2 GCH1-202ENST00000395514 1977 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
TRIM54Q9BYV2 CACNA1A-218ENST00000635895 8657 ntAPPRIS ALT2 TSL 5 BASIC20.73■□□□□ 0.91
TRIM54Q9BYV2 CACNA1A-257ENST00000638009 8665 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
TRIM54Q9BYV2 TRIM3-214ENST00000536344 2704 ntTSL 2 BASIC20.73■□□□□ 0.91
TRIM54Q9BYV2 PXK-211ENST00000484288 2031 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
TRIM54Q9BYV2 AP005233.1-201ENST00000562341 2424 ntTSL 2 BASIC20.73■□□□□ 0.91
TRIM54Q9BYV2 AC055733.4-201ENST00000638462 1354 ntBASIC20.72■□□□□ 0.91
TRIM54Q9BYV2 COL15A1-201ENST00000375001 5496 ntAPPRIS P2 TSL 1 (best) BASIC20.72■□□□□ 0.91
TRIM54Q9BYV2 ELOA3B-201ENST00000611323 1641 ntAPPRIS P1 BASIC20.72■□□□□ 0.91
TRIM54Q9BYV2 ELOA3D-201ENST00000620881 1641 ntAPPRIS P1 BASIC20.72■□□□□ 0.91
TRIM54Q9BYV2 WAS-201ENST00000376701 1849 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
TRIM54Q9BYV2 MGAT4D-208ENST00000515354 1806 ntTSL 3 BASIC20.72■□□□□ 0.91
TRIM54Q9BYV2 PAQR4-201ENST00000293978 2644 ntTSL 2 BASIC20.72■□□□□ 0.91
TRIM54Q9BYV2 C1QL1-201ENST00000253407 1295 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
TRIM54Q9BYV2 MRPL46-201ENST00000312475 1019 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
TRIM54Q9BYV2 PRKCQ-AS1-202ENST00000445427 1133 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
TRIM54Q9BYV2 AP2S1-203ENST00000593442 636 ntTSL 2 BASIC20.72■□□□□ 0.91
TRIM54Q9BYV2 AC010999.2-201ENST00000621974 596 ntTSL 2 BASIC20.72■□□□□ 0.91
TRIM54Q9BYV2 MAML1-201ENST00000292599 5723 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
TRIM54Q9BYV2 DOK3-202ENST00000357198 1729 ntTSL 2 BASIC20.72■□□□□ 0.91
TRIM54Q9BYV2 POFUT1-201ENST00000375730 1507 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
TRIM54Q9BYV2 AC005229.4-201ENST00000610085 2198 ntBASIC20.72■□□□□ 0.91
TRIM54Q9BYV2 KLHL17-205ENST00000622660 1950 ntTSL 5 BASIC20.72■□□□□ 0.91
TRIM54Q9BYV2 SLC2A11-202ENST00000316185 1555 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
TRIM54Q9BYV2 SDR39U1-208ENST00000554698 1364 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
TRIM54Q9BYV2 CDKN2C-203ENST00000396148 2086 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
TRIM54Q9BYV2 SLC16A10-202ENST00000368851 2508 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
TRIM54Q9BYV2 PEX5-204ENST00000412720 2105 ntTSL 2 BASIC20.71■□□□□ 0.91
TRIM54Q9BYV2 ANKRD13D-202ENST00000447274 2881 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
TRIM54Q9BYV2 SPTBN4-203ENST00000392023 2419 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
TRIM54Q9BYV2 NT5C3AP1-201ENST00000394500 1012 ntBASIC20.71■□□□□ 0.91
TRIM54Q9BYV2 ST3GAL3-207ENST00000353126 1969 ntTSL 5 BASIC20.71■□□□□ 0.91
Retrieved 100 of 98,524 protein–RNA pairs in 36.1 ms