Protein–RNA interactions for Protein: Q96RK4

BBS4, Bardet-Biedl syndrome 4 protein, humanhuman

Predictions only

Length 519 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BBS4Q96RK4 SLC39A3-203ENST00000545664 1219 ntTSL 2 BASIC19.95■□□□□ 0.78
BBS4Q96RK4 NR2F2-204ENST00000453270 1712 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
BBS4Q96RK4 EFS-203ENST00000429593 2610 ntTSL 2 BASIC19.95■□□□□ 0.78
BBS4Q96RK4 RAB1A-202ENST00000409751 1333 ntTSL 5 BASIC19.95■□□□□ 0.78
BBS4Q96RK4 TTYH1-203ENST00000376531 1763 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
BBS4Q96RK4 PCSK6-217ENST00000618548 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC19.95■□□□□ 0.78
BBS4Q96RK4 ZYG11B-202ENST00000545132 2294 ntTSL 2 BASIC19.95■□□□□ 0.78
BBS4Q96RK4 GRTP1-202ENST00000375430 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC19.95■□□□□ 0.78
BBS4Q96RK4 RAB24-202ENST00000303270 1385 ntTSL 2 BASIC19.95■□□□□ 0.78
BBS4Q96RK4 SDR39U1-208ENST00000554698 1364 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
BBS4Q96RK4 PPP3CC-203ENST00000397775 2094 ntTSL 2 BASIC19.95■□□□□ 0.78
BBS4Q96RK4 RUSC1-AS1-203ENST00000450199 1636 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
BBS4Q96RK4 ADGRL1-202ENST00000361434 5610 ntAPPRIS P3 TSL 1 (best) BASIC19.94■□□□□ 0.78
BBS4Q96RK4 RBM26-207ENST00000622611 5230 ntTSL 2 BASIC19.94■□□□□ 0.78
BBS4Q96RK4 CBWD3-202ENST00000377342 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC19.94■□□□□ 0.78
BBS4Q96RK4 MALT1-201ENST00000345724 2866 ntAPPRIS ALT2 TSL 1 (best) BASIC19.94■□□□□ 0.78
BBS4Q96RK4 CCKBR-206ENST00000532715 1734 ntTSL 3 BASIC19.94■□□□□ 0.78
BBS4Q96RK4 ZNF784-201ENST00000325351 2021 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
BBS4Q96RK4 C1QL1-201ENST00000253407 1295 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
BBS4Q96RK4 PRKCQ-AS1-202ENST00000445427 1133 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
BBS4Q96RK4 PRKCQ-AS1-204ENST00000455810 920 ntTSL 2 BASIC19.94■□□□□ 0.78
BBS4Q96RK4 TMEM9B-205ENST00000534025 2083 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
BBS4Q96RK4 GAL3ST3-201ENST00000312006 2133 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
BBS4Q96RK4 MAML1-201ENST00000292599 5723 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
BBS4Q96RK4 LINC00969-219ENST00000453324 1439 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
BBS4Q96RK4 CRHR1-201ENST00000293493 2621 ntTSL 5 BASIC19.93■□□□□ 0.78
BBS4Q96RK4 HPCAL1-201ENST00000307845 1751 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
BBS4Q96RK4 PACRGL-227ENST00000513459 1773 ntTSL 5 BASIC19.93■□□□□ 0.78
BBS4Q96RK4 FNDC11-204ENST00000615526 2954 ntAPPRIS P1 BASIC19.93■□□□□ 0.78
BBS4Q96RK4 DIAPH1-203ENST00000389057 5762 ntAPPRIS ALT2 TSL 5 BASIC19.93■□□□□ 0.78
BBS4Q96RK4 STK11-205ENST00000586243 2777 ntAPPRIS ALT2 TSL 5 BASIC19.93■□□□□ 0.78
BBS4Q96RK4 PDCD2-203ENST00000443345 1897 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
BBS4Q96RK4 CLPSL2-201ENST00000360454 488 ntAPPRIS ALT2 TSL 1 (best) BASIC19.93■□□□□ 0.78
BBS4Q96RK4 LINC01167-201ENST00000423232 604 ntTSL 3 BASIC19.93■□□□□ 0.78
BBS4Q96RK4 PPP1R14A-205ENST00000591585 949 ntTSL 2 BASIC19.93■□□□□ 0.78
BBS4Q96RK4 MIR6084-201ENST00000622012 110 ntBASIC19.93■□□□□ 0.78
BBS4Q96RK4 KDM2A-202ENST00000398645 6511 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
BBS4Q96RK4 NFS1-204ENST00000397425 1956 ntTSL 5 BASIC19.93■□□□□ 0.78
BBS4Q96RK4 LRRC75A-201ENST00000409083 2656 ntAPPRIS P3 TSL 2 BASIC19.93■□□□□ 0.78
BBS4Q96RK4 ATP6AP1-201ENST00000369762 2099 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
BBS4Q96RK4 FGFR1-238ENST00000532791 5590 ntAPPRIS ALT1 TSL 5 BASIC19.93■□□□□ 0.78
BBS4Q96RK4 FBXL19-205ENST00000562319 2462 ntAPPRIS ALT2 TSL 2 BASIC19.93■□□□□ 0.78
BBS4Q96RK4 SORCS2-203ENST00000507866 6152 ntAPPRIS P2 TSL 1 (best) BASIC19.93■□□□□ 0.78
BBS4Q96RK4 LINC01089-202ENST00000429892 1521 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
BBS4Q96RK4 ADRM1-204ENST00000491935 1530 ntAPPRIS P1 TSL 5 BASIC19.92■□□□□ 0.78
BBS4Q96RK4 PHF10-202ENST00000366780 1589 ntAPPRIS ALT2 TSL 5 BASIC19.92■□□□□ 0.78
BBS4Q96RK4 RAP1B-204ENST00000393436 2049 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
BBS4Q96RK4 DUSP2-201ENST00000288943 1688 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
BBS4Q96RK4 BCKDK-201ENST00000219794 2128 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
BBS4Q96RK4 DYM-203ENST00000442713 2147 ntTSL 2 BASIC19.92■□□□□ 0.78
BBS4Q96RK4 CPEB1-AS1-201ENST00000560650 2138 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
BBS4Q96RK4 POLR2E-214ENST00000619917 932 ntTSL 5 BASIC19.92■□□□□ 0.78
BBS4Q96RK4 AC135048.1-201ENST00000566056 1318 ntTSL 2 BASIC19.92■□□□□ 0.78
BBS4Q96RK4 NEURL4-203ENST00000570460 4890 ntAPPRIS ALT2 TSL 5 BASIC19.92■□□□□ 0.78
BBS4Q96RK4 NOXA1-202ENST00000392815 1464 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
BBS4Q96RK4 MSANTD1-204ENST00000510580 2039 ntTSL 5 BASIC19.92■□□□□ 0.78
BBS4Q96RK4 CCDC185-201ENST00000366875 2054 ntAPPRIS P1 BASIC19.91■□□□□ 0.78
BBS4Q96RK4 PXYLP1-203ENST00000502783 2066 ntTSL 2 BASIC19.91■□□□□ 0.78
BBS4Q96RK4 KIF12-202ENST00000468460 2162 ntAPPRIS ALT2 TSL 5 BASIC19.91■□□□□ 0.78
BBS4Q96RK4 CXCL16-203ENST00000574412 1668 ntAPPRIS P2 TSL 1 (best) BASIC19.91■□□□□ 0.78
BBS4Q96RK4 KCNH6-203ENST00000580652 1703 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
BBS4Q96RK4 CCDC130-201ENST00000221554 1792 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
BBS4Q96RK4 ADCK2-201ENST00000072869 2377 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
BBS4Q96RK4 CD55-205ENST00000367067 1843 ntAPPRIS ALT2 TSL 5 BASIC19.91■□□□□ 0.78
BBS4Q96RK4 FAHD1-202ENST00000382668 1845 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
BBS4Q96RK4 PTPN18-202ENST00000347849 2472 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
BBS4Q96RK4 CROT-202ENST00000412227 1213 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
BBS4Q96RK4 CDKN2A-210ENST00000530628 748 ntAPPRIS P1 TSL 5 BASIC19.91■□□□□ 0.78
BBS4Q96RK4 AC127029.2-201ENST00000577329 502 ntTSL 3 BASIC19.91■□□□□ 0.78
BBS4Q96RK4 BIN1-202ENST00000316724 2693 ntAPPRIS P4 TSL 1 (best) BASIC19.91■□□□□ 0.78
BBS4Q96RK4 MSL1-204ENST00000578648 2267 ntTSL 5 BASIC19.91■□□□□ 0.78
BBS4Q96RK4 RASL12-202ENST00000421977 1523 ntTSL 2 BASIC19.91■□□□□ 0.78
BBS4Q96RK4 DHRS2-202ENST00000344777 1678 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
BBS4Q96RK4 AC009014.1-201ENST00000607574 1667 ntAPPRIS P1 BASIC19.91■□□□□ 0.78
BBS4Q96RK4 FAM3A-202ENST00000359889 1712 ntAPPRIS P1 TSL 2 BASIC19.9■□□□□ 0.78
BBS4Q96RK4 MAF1-205ENST00000534585 1754 ntTSL 5 BASIC19.9■□□□□ 0.78
BBS4Q96RK4 TRIM3-214ENST00000536344 2704 ntTSL 2 BASIC19.9■□□□□ 0.78
BBS4Q96RK4 RHOBTB3-201ENST00000379982 5537 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
BBS4Q96RK4 FEM1AP4-201ENST00000443167 1987 ntBASIC19.9■□□□□ 0.78
BBS4Q96RK4 ALDH16A1-202ENST00000455361 2470 ntTSL 2 BASIC19.9■□□□□ 0.78
BBS4Q96RK4 MOSPD3-202ENST00000379527 1016 ntAPPRIS P1 TSL 5 BASIC19.9■□□□□ 0.78
BBS4Q96RK4 LTC4S-202ENST00000401985 486 ntTSL 3 BASIC19.9■□□□□ 0.78
BBS4Q96RK4 FEZ1-205ENST00000524435 750 ntTSL 2 BASIC19.9■□□□□ 0.78
BBS4Q96RK4 PRSS22-203ENST00000571228 1037 ntTSL 2 BASIC19.9■□□□□ 0.78
BBS4Q96RK4 ALKAL2-204ENST00000403610 1389 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
BBS4Q96RK4 HLA-C-201ENST00000376228 1536 ntAPPRIS P2 BASIC19.9■□□□□ 0.78
BBS4Q96RK4 PBX4-201ENST00000251203 1724 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
BBS4Q96RK4 DCTD-202ENST00000438320 1972 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
BBS4Q96RK4 MATK-203ENST00000395045 2073 ntAPPRIS P4 TSL 2 BASIC19.9■□□□□ 0.78
BBS4Q96RK4 LMO4-202ENST00000370544 5405 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.78
BBS4Q96RK4 RPL8-201ENST00000262584 1041 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
BBS4Q96RK4 OSR1-201ENST00000272223 1936 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
BBS4Q96RK4 TEAD2-201ENST00000311227 2164 ntAPPRIS P3 TSL 1 (best) BASIC19.89■□□□□ 0.77
BBS4Q96RK4 C8orf82-201ENST00000313465 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC19.89■□□□□ 0.77
BBS4Q96RK4 DCTN3-202ENST00000341694 899 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
BBS4Q96RK4 UCK2-201ENST00000367879 1375 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
BBS4Q96RK4 PRR20B-201ENST00000377930 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
BBS4Q96RK4 PRR20A-201ENST00000377931 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
BBS4Q96RK4 DCTN3-205ENST00000378916 773 ntTSL 2 BASIC19.89■□□□□ 0.77
BBS4Q96RK4 TSPY4-201ENST00000383008 1143 ntAPPRIS ALT2 TSL 5 BASIC19.89■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 42.7 ms