Protein–RNA interactions for Protein: Q96HC4

PDLIM5, PDZ and LIM domain protein 5, humanhuman

Known RBP Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5Q96HC4 SCLY-201ENST00000254663 2562 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
PDLIM5Q96HC4 ZNF668-209ENST00000539836 2469 ntTSL 5 BASIC20.65■□□□□ 0.9
PDLIM5Q96HC4 C10orf55-202ENST00000412307 2360 ntAPPRIS P1 TSL 5 BASIC20.65■□□□□ 0.9
PDLIM5Q96HC4 THEM6-201ENST00000336138 2259 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
PDLIM5Q96HC4 TMEM129-206ENST00000536901 2172 ntAPPRIS P1 TSL 5 BASIC20.65■□□□□ 0.9
PDLIM5Q96HC4 BASP1-201ENST00000322611 1878 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
PDLIM5Q96HC4 EPO-201ENST00000252723 1330 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
PDLIM5Q96HC4 CLPSL2-201ENST00000360454 488 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.89
PDLIM5Q96HC4 TM7SF2-201ENST00000279263 1722 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
PDLIM5Q96HC4 TMC6-212ENST00000589553 2389 ntTSL 2 BASIC20.64■□□□□ 0.89
PDLIM5Q96HC4 ORAI3-201ENST00000318663 2206 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
PDLIM5Q96HC4 VPS29-206ENST00000549578 1523 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
PDLIM5Q96HC4 MPST-205ENST00000404802 1453 ntAPPRIS P1 TSL 3 BASIC20.63■□□□□ 0.89
PDLIM5Q96HC4 PPCS-202ENST00000372560 793 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
PDLIM5Q96HC4 LRRC3C-201ENST00000377924 891 ntAPPRIS P1 TSL 3 BASIC20.63■□□□□ 0.89
PDLIM5Q96HC4 MIR6084-201ENST00000622012 110 ntBASIC20.63■□□□□ 0.89
PDLIM5Q96HC4 NPTXR-201ENST00000333039 5784 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
PDLIM5Q96HC4 FNDC10-201ENST00000422725 2085 ntAPPRIS P1 BASIC20.63■□□□□ 0.89
PDLIM5Q96HC4 TM9SF3-201ENST00000371142 6141 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
PDLIM5Q96HC4 AEBP2-204ENST00000398864 5099 ntAPPRIS P4 TSL 1 (best) BASIC20.63■□□□□ 0.89
PDLIM5Q96HC4 EEF1D-204ENST00000423316 2378 ntAPPRIS P4 TSL 5 BASIC20.63■□□□□ 0.89
PDLIM5Q96HC4 ANAPC13-204ENST00000510994 1840 ntAPPRIS P1 TSL 2 BASIC20.62■□□□□ 0.89
PDLIM5Q96HC4 SEPT5-209ENST00000438754 2241 ntTSL 2 BASIC20.62■□□□□ 0.89
PDLIM5Q96HC4 CPNE2-201ENST00000290776 2645 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
PDLIM5Q96HC4 CSNK1G2-201ENST00000255641 2918 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
PDLIM5Q96HC4 MYH7B-209ENST00000618182 6197 ntAPPRIS ALT2 TSL 5 BASIC20.62■□□□□ 0.89
PDLIM5Q96HC4 PLSCR3-201ENST00000324822 1689 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
PDLIM5Q96HC4 AK1-201ENST00000223836 736 ntTSL 3 BASIC20.62■□□□□ 0.89
PDLIM5Q96HC4 CDKN2AIPNL-201ENST00000395009 800 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
PDLIM5Q96HC4 ARHGAP24-206ENST00000503995 1273 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
PDLIM5Q96HC4 AP003071.3-201ENST00000562506 366 ntTSL 3 BASIC20.62■□□□□ 0.89
PDLIM5Q96HC4 PRSS22-203ENST00000571228 1037 ntTSL 2 BASIC20.62■□□□□ 0.89
PDLIM5Q96HC4 TRIM3-214ENST00000536344 2704 ntTSL 2 BASIC20.62■□□□□ 0.89
PDLIM5Q96HC4 SOX3-201ENST00000370536 2132 ntAPPRIS P1 BASIC20.62■□□□□ 0.89
PDLIM5Q96HC4 DCAF4-202ENST00000358377 2024 ntAPPRIS P4 TSL 1 (best) BASIC20.61■□□□□ 0.89
PDLIM5Q96HC4 AC110285.2-201ENST00000571724 1565 ntTSL 2 BASIC20.61■□□□□ 0.89
PDLIM5Q96HC4 PHLDA3-201ENST00000367309 896 ntAPPRIS P1 TSL 5 BASIC20.61■□□□□ 0.89
PDLIM5Q96HC4 SCN1B-203ENST00000595652 814 ntTSL 2 BASIC20.61■□□□□ 0.89
PDLIM5Q96HC4 AL138963.3-201ENST00000610057 588 ntTSL 4 BASIC20.61■□□□□ 0.89
PDLIM5Q96HC4 EPHA8-202ENST00000374644 1802 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
PDLIM5Q96HC4 HSF4-215ENST00000521374 1515 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
PDLIM5Q96HC4 CCDC88B-203ENST00000359902 2326 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
PDLIM5Q96HC4 PCED1A-202ENST00000360652 2016 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
PDLIM5Q96HC4 NGLY1-204ENST00000396649 2024 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
PDLIM5Q96HC4 HLA-G-204ENST00000376828 1490 ntAPPRIS ALT2 BASIC20.61■□□□□ 0.89
PDLIM5Q96HC4 CENPU-201ENST00000281453 1998 ntAPPRIS P2 TSL 1 (best) BASIC20.61■□□□□ 0.89
PDLIM5Q96HC4 RASD1-202ENST00000579152 1404 ntTSL 2 BASIC20.61■□□□□ 0.89
PDLIM5Q96HC4 ARSA-205ENST00000453344 1650 ntTSL 2 BASIC20.61■□□□□ 0.89
PDLIM5Q96HC4 ACADVL-202ENST00000350303 2191 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
PDLIM5Q96HC4 DACT2-203ENST00000607983 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
PDLIM5Q96HC4 MRAS-202ENST00000423968 1803 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
PDLIM5Q96HC4 FMR1-AS1-202ENST00000596112 1845 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
PDLIM5Q96HC4 CCDC28B-201ENST00000373602 1089 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
PDLIM5Q96HC4 NMRAL1-202ENST00000404295 1233 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
PDLIM5Q96HC4 SDHAP3-201ENST00000436493 736 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
PDLIM5Q96HC4 CDKN2A-210ENST00000530628 748 ntAPPRIS P1 TSL 5 BASIC20.6■□□□□ 0.89
PDLIM5Q96HC4 TUNAR-203ENST00000554321 767 ntAPPRIS P1 TSL 4 BASIC20.6■□□□□ 0.89
PDLIM5Q96HC4 AL137779.2-201ENST00000554859 448 ntTSL 2 BASIC20.6■□□□□ 0.89
PDLIM5Q96HC4 PTDSS2-201ENST00000308020 2445 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
PDLIM5Q96HC4 PANO1-201ENST00000620120 1680 ntAPPRIS P1 BASIC20.6■□□□□ 0.89
PDLIM5Q96HC4 SEPT5-210ENST00000455784 2070 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
PDLIM5Q96HC4 PAQR6-213ENST00000612424 2037 ntTSL 2 BASIC20.6■□□□□ 0.89
PDLIM5Q96HC4 RPS6-203ENST00000380384 1355 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
PDLIM5Q96HC4 WWTR1-AS1-202ENST00000479752 1700 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
PDLIM5Q96HC4 TMEM206-205ENST00000535273 2119 ntTSL 2 BASIC20.59■□□□□ 0.89
PDLIM5Q96HC4 GSN-204ENST00000373818 2657 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
PDLIM5Q96HC4 ZGPAT-204ENST00000369967 1890 ntAPPRIS P1 TSL 5 BASIC20.59■□□□□ 0.89
PDLIM5Q96HC4 RPL8-201ENST00000262584 1041 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
PDLIM5Q96HC4 CROT-202ENST00000412227 1213 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
PDLIM5Q96HC4 FEZ1-205ENST00000524435 750 ntTSL 2 BASIC20.59■□□□□ 0.89
PDLIM5Q96HC4 PPP1R14A-205ENST00000591585 949 ntTSL 2 BASIC20.59■□□□□ 0.89
PDLIM5Q96HC4 UNC93B1-201ENST00000227471 2316 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
PDLIM5Q96HC4 ANAPC4-201ENST00000315368 2685 ntAPPRIS P3 TSL 1 (best) BASIC20.59■□□□□ 0.89
PDLIM5Q96HC4 HNRNPLL-204ENST00000409328 1908 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
PDLIM5Q96HC4 MOK-226ENST00000522874 1890 ntAPPRIS ALT2 TSL 5 BASIC20.58■□□□□ 0.89
PDLIM5Q96HC4 ADAMTS13-204ENST00000371911 1155 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
PDLIM5Q96HC4 AC073343.2-201ENST00000413182 548 ntTSL 4 BASIC20.58■□□□□ 0.89
PDLIM5Q96HC4 AC123595.1-201ENST00000440769 1046 ntBASIC20.58■□□□□ 0.89
PDLIM5Q96HC4 SFTPC-205ENST00000521315 1046 ntAPPRIS ALT1 TSL 1 (best) BASIC20.58■□□□□ 0.89
PDLIM5Q96HC4 TSPAN11-202ENST00000535215 988 ntTSL 2 BASIC20.58■□□□□ 0.89
PDLIM5Q96HC4 ELANE-202ENST00000590230 1028 ntAPPRIS P1 TSL 5 BASIC20.58■□□□□ 0.89
PDLIM5Q96HC4 E2F1-201ENST00000343380 2503 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
PDLIM5Q96HC4 NUDT16L1-202ENST00000405142 2040 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
PDLIM5Q96HC4 E4F1-206ENST00000565090 2028 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
PDLIM5Q96HC4 AKT2-210ENST00000424901 5170 ntTSL 5 BASIC20.57■□□□□ 0.88
PDLIM5Q96HC4 PALM-207ENST00000590161 2137 ntTSL 4 BASIC20.57■□□□□ 0.88
PDLIM5Q96HC4 JPT1-206ENST00000476258 2289 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
PDLIM5Q96HC4 AC243965.2-201ENST00000612576 2671 ntTSL 5 BASIC20.57■□□□□ 0.88
PDLIM5Q96HC4 ITPKC-201ENST00000263370 3385 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
PDLIM5Q96HC4 JTB-203ENST00000368589 1216 ntTSL 2 BASIC20.57■□□□□ 0.88
PDLIM5Q96HC4 AC079140.4-201ENST00000507448 529 ntBASIC20.57■□□□□ 0.88
PDLIM5Q96HC4 AC145207.2-202ENST00000576554 565 ntTSL 5 BASIC20.57■□□□□ 0.88
PDLIM5Q96HC4 AC011511.3-201ENST00000587088 355 ntTSL 2 BASIC20.57■□□□□ 0.88
PDLIM5Q96HC4 FP565260.3-201ENST00000612610 1162 ntAPPRIS P5 TSL 1 (best) BASIC20.57■□□□□ 0.88
PDLIM5Q96HC4 TMEM178A-201ENST00000281961 1662 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
PDLIM5Q96HC4 FAM69B-202ENST00000371692 1668 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
PDLIM5Q96HC4 TCP11-203ENST00000373974 1689 ntAPPRIS ALT2 TSL 2 BASIC20.57■□□□□ 0.88
PDLIM5Q96HC4 LINC02228-203ENST00000641970 1355 ntBASIC20.57■□□□□ 0.88
PDLIM5Q96HC4 NAAA-201ENST00000286733 1900 ntAPPRIS P2 TSL 5 BASIC20.57■□□□□ 0.88
PDLIM5Q96HC4 KRT87P-202ENST00000534226 1464 ntBASIC20.56■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 18.8 ms