Protein–RNA interactions for Protein: Q96EP0

RNF31, E3 ubiquitin-protein ligase RNF31, humanhuman

Predictions only

Length 1,072 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF31Q96EP0 EPO-201ENST00000252723 1330 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
RNF31Q96EP0 VPS29-206ENST00000549578 1523 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
RNF31Q96EP0 IGFBP1-202ENST00000457280 1601 ntAPPRIS ALT2 TSL 5 BASIC20.27■□□□□ 0.84
RNF31Q96EP0 SOCS7-202ENST00000613678 1827 ntTSL 5 BASIC20.27■□□□□ 0.84
RNF31Q96EP0 TPRN-202ENST00000409012 2718 ntAPPRIS P2 TSL 1 (best) BASIC20.27■□□□□ 0.84
RNF31Q96EP0 CDK5-204ENST00000485972 1758 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
RNF31Q96EP0 SPINT2-202ENST00000454580 1367 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
RNF31Q96EP0 SMCO4-201ENST00000298966 1104 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
RNF31Q96EP0 EIF5A-205ENST00000419711 1271 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
RNF31Q96EP0 AL731577.2-201ENST00000508096 555 ntTSL 2 BASIC20.27■□□□□ 0.84
RNF31Q96EP0 TRIQK-221ENST00000524107 737 ntAPPRIS P1 TSL 3 BASIC20.27■□□□□ 0.84
RNF31Q96EP0 C11orf24-209ENST00000533310 980 ntAPPRIS ALT2 TSL 5 BASIC20.27■□□□□ 0.84
RNF31Q96EP0 LOXL1-AS1-208ENST00000565756 885 ntTSL 2 BASIC20.27■□□□□ 0.84
RNF31Q96EP0 AC027307.1-201ENST00000590252 457 ntTSL 5 BASIC20.27■□□□□ 0.84
RNF31Q96EP0 SCN1B-203ENST00000595652 814 ntTSL 2 BASIC20.27■□□□□ 0.84
RNF31Q96EP0 MBD3L1-202ENST00000595891 872 ntAPPRIS P1 TSL 2 BASIC20.27■□□□□ 0.84
RNF31Q96EP0 AC005181.1-201ENST00000604782 1256 ntBASIC20.27■□□□□ 0.84
RNF31Q96EP0 CAMKK2-208ENST00000412367 2006 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
RNF31Q96EP0 HNRNPM-202ENST00000348943 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.83
RNF31Q96EP0 AP006587.3-201ENST00000525742 1516 ntBASIC20.27■□□□□ 0.83
RNF31Q96EP0 FAM83D-201ENST00000619304 2475 ntTSL 1 (best) BASIC20.27■□□□□ 0.83
RNF31Q96EP0 CACNG2-201ENST00000300105 2384 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
RNF31Q96EP0 PKD1P6-201ENST00000343738 4769 ntBASIC20.26■□□□□ 0.83
RNF31Q96EP0 PPP1R13B-201ENST00000202556 4958 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
RNF31Q96EP0 MMEL1-206ENST00000502556 1943 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
RNF31Q96EP0 NPAS3-210ENST00000551492 2817 ntAPPRIS ALT2 TSL 5 BASIC20.26■□□□□ 0.83
RNF31Q96EP0 MOB2-201ENST00000329957 1207 ntAPPRIS P1 TSL 2 BASIC20.26■□□□□ 0.83
RNF31Q96EP0 EFCAB6-202ENST00000356087 1129 ntTSL 5 BASIC20.26■□□□□ 0.83
RNF31Q96EP0 AC007322.1-201ENST00000426983 750 ntBASIC20.26■□□□□ 0.83
RNF31Q96EP0 AC083906.2-201ENST00000511578 360 ntBASIC20.26■□□□□ 0.83
RNF31Q96EP0 DHRS4-207ENST00000559632 1003 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
RNF31Q96EP0 AL138781.1-201ENST00000566567 1274 ntBASIC20.26■□□□□ 0.83
RNF31Q96EP0 F2RL3-202ENST00000599210 613 ntTSL 2 BASIC20.26■□□□□ 0.83
RNF31Q96EP0 CNN3-201ENST00000370206 2165 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
RNF31Q96EP0 DLL3-202ENST00000356433 2055 ntAPPRIS P1 TSL 2 BASIC20.26■□□□□ 0.83
RNF31Q96EP0 AC080038.3-201ENST00000623346 1952 ntBASIC20.26■□□□□ 0.83
RNF31Q96EP0 ACSF2-207ENST00000504392 1881 ntTSL 2 BASIC20.26■□□□□ 0.83
RNF31Q96EP0 TMEM159-201ENST00000233047 2014 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
RNF31Q96EP0 ANKHD1-204ENST00000394722 2035 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
RNF31Q96EP0 KAT5-201ENST00000341318 2296 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
RNF31Q96EP0 DUSP26-201ENST00000256261 1835 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
RNF31Q96EP0 GNB1-209ENST00000610897 3145 ntAPPRIS P1 TSL 5 BASIC20.25■□□□□ 0.83
RNF31Q96EP0 DENND4B-201ENST00000361217 5706 ntAPPRIS P2 TSL 1 (best) BASIC20.25■□□□□ 0.83
RNF31Q96EP0 PTPN13-205ENST00000502971 1708 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
RNF31Q96EP0 MDK-204ENST00000395569 686 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
RNF31Q96EP0 NDUFS3-207ENST00000529276 558 ntTSL 2 BASIC20.25■□□□□ 0.83
RNF31Q96EP0 ASPSCR1-211ENST00000581647 720 ntTSL 2 BASIC20.25■□□□□ 0.83
RNF31Q96EP0 PRMT1-221ENST00000610806 1192 ntTSL 3 BASIC20.25■□□□□ 0.83
RNF31Q96EP0 FAM72A-202ENST00000367128 2398 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
RNF31Q96EP0 FAM72D-201ENST00000400889 2397 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
RNF31Q96EP0 GCA-201ENST00000233612 1694 ntTSL 2 BASIC20.25■□□□□ 0.83
RNF31Q96EP0 PNMA6A-201ENST00000421798 2209 ntAPPRIS P1 TSL 2 BASIC20.25■□□□□ 0.83
RNF31Q96EP0 STIM2-204ENST00000467087 5154 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
RNF31Q96EP0 ZNF843-201ENST00000315678 2137 ntAPPRIS P2 TSL 2 BASIC20.24■□□□□ 0.83
RNF31Q96EP0 AC233723.2-201ENST00000623798 2106 ntBASIC20.24■□□□□ 0.83
RNF31Q96EP0 DONSON-202ENST00000303113 2028 ntTSL 5 BASIC20.24■□□□□ 0.83
RNF31Q96EP0 ASB6-201ENST00000277458 2330 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
RNF31Q96EP0 KPTN-201ENST00000338134 1691 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
RNF31Q96EP0 CBWD3-202ENST00000377342 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
RNF31Q96EP0 AC098934.4-201ENST00000564127 592 ntBASIC20.24■□□□□ 0.83
RNF31Q96EP0 AC016888.1-201ENST00000585285 565 ntTSL 3 BASIC20.24■□□□□ 0.83
RNF31Q96EP0 HAS1-203ENST00000594621 760 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
RNF31Q96EP0 C5AR2-202ENST00000600626 1287 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
RNF31Q96EP0 CERKL-203ENST00000374969 1330 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
RNF31Q96EP0 REEP5-202ENST00000379638 3326 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
RNF31Q96EP0 AC026471.6-201ENST00000622954 1905 ntBASIC20.23■□□□□ 0.83
RNF31Q96EP0 LINC01184-201ENST00000499346 1380 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
RNF31Q96EP0 ASAP2-202ENST00000315273 5582 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
RNF31Q96EP0 CD6-203ENST00000352009 1809 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
RNF31Q96EP0 PLEKHA8-208ENST00000622102 2140 ntTSL 5 BASIC20.23■□□□□ 0.83
RNF31Q96EP0 ZNF316-201ENST00000382252 5392 ntAPPRIS P1 TSL 5 BASIC20.23■□□□□ 0.83
RNF31Q96EP0 ARSB-201ENST00000264914 5327 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
RNF31Q96EP0 BHLHA15-201ENST00000314018 706 ntAPPRIS P1 BASIC20.23■□□□□ 0.83
RNF31Q96EP0 MAP1LC3A-202ENST00000374837 961 ntTSL 3 BASIC20.23■□□□□ 0.83
RNF31Q96EP0 SKI-201ENST00000378536 5613 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
RNF31Q96EP0 TANGO2-202ENST00000398042 2011 ntTSL 2 BASIC20.23■□□□□ 0.83
RNF31Q96EP0 UQCRFS1P1-201ENST00000435169 820 ntBASIC20.23■□□□□ 0.83
RNF31Q96EP0 AC010141.2-201ENST00000452426 721 ntBASIC20.23■□□□□ 0.83
RNF31Q96EP0 AC106738.1-201ENST00000560487 359 ntTSL 3 BASIC20.23■□□□□ 0.83
RNF31Q96EP0 LIMD2-202ENST00000578061 756 ntAPPRIS P1 TSL 2 BASIC20.23■□□□□ 0.83
RNF31Q96EP0 BHLHA15-202ENST00000609256 796 ntAPPRIS P1 TSL 3 BASIC20.23■□□□□ 0.83
RNF31Q96EP0 P4HA3-202ENST00000427714 2248 ntTSL 2 BASIC20.23■□□□□ 0.83
RNF31Q96EP0 C14orf80-201ENST00000329886 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
RNF31Q96EP0 GRK4-206ENST00000504933 1971 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
RNF31Q96EP0 SELENOO-201ENST00000380903 2315 ntAPPRIS P2 TSL 1 (best) BASIC20.22■□□□□ 0.83
RNF31Q96EP0 SELENOO-203ENST00000611222 2311 ntAPPRIS ALT2 TSL 5 BASIC20.22■□□□□ 0.83
RNF31Q96EP0 LSM14B-201ENST00000279068 2548 ntAPPRIS P1 TSL 5 BASIC20.22■□□□□ 0.83
RNF31Q96EP0 RNF39-201ENST00000244360 2206 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
RNF31Q96EP0 MRPL37-206ENST00000605337 1582 ntTSL 5 BASIC20.22■□□□□ 0.83
RNF31Q96EP0 AC074212.1-201ENST00000559756 1402 ntTSL 3 BASIC20.22■□□□□ 0.83
RNF31Q96EP0 MRPL39-201ENST00000307301 1199 ntAPPRIS ALT2 TSL 5 BASIC20.22■□□□□ 0.83
RNF31Q96EP0 MRPL39-202ENST00000352957 1110 ntAPPRIS P3 TSL 1 (best) BASIC20.22■□□□□ 0.83
RNF31Q96EP0 METTL26-203ENST00000397664 604 ntTSL 2 BASIC20.22■□□□□ 0.83
RNF31Q96EP0 LY6E-202ENST00000429120 1173 ntAPPRIS P2 TSL 1 (best) BASIC20.22■□□□□ 0.83
RNF31Q96EP0 CNN2P6-201ENST00000439038 900 ntBASIC20.22■□□□□ 0.83
RNF31Q96EP0 COL19A1-203ENST00000478620 589 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
RNF31Q96EP0 AL691442.1-201ENST00000505139 1042 ntAPPRIS P1 TSL 2 BASIC20.22■□□□□ 0.83
RNF31Q96EP0 NCAPD3-204ENST00000526422 1060 ntAPPRIS ALT2 TSL 2 BASIC20.22■□□□□ 0.83
RNF31Q96EP0 AC005697.1-201ENST00000582441 582 ntAPPRIS P1 TSL 4 BASIC20.22■□□□□ 0.83
RNF31Q96EP0 TSPAN17-207ENST00000508164 2457 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 18.7 ms