Protein–RNA interactions for Protein: Q969V3

NCLN, Nicalin, humanhuman

Predictions only

Length 563 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCLNQ969V3 UBALD1-208ENST00000591401 1305 ntTSL 5 BASIC20.35■□□□□ 0.85
NCLNQ969V3 DUSP5-201ENST00000369583 2557 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
NCLNQ969V3 DAZAP2-201ENST00000412716 2598 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
NCLNQ969V3 YIF1B-202ENST00000337679 1257 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
NCLNQ969V3 POLR3GL-201ENST00000369313 818 ntTSL 2 BASIC20.35■□□□□ 0.85
NCLNQ969V3 LBX2-202ENST00000377566 1186 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
NCLNQ969V3 RPUSD3-206ENST00000433535 1178 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
NCLNQ969V3 ZFYVE28-207ENST00000509171 1135 ntTSL 2 BASIC20.35■□□□□ 0.85
NCLNQ969V3 ACBD4-216ENST00000619916 1276 ntTSL 5 BASIC20.35■□□□□ 0.85
NCLNQ969V3 GOLGA2P6-201ENST00000340929 2049 ntBASIC20.35■□□□□ 0.85
NCLNQ969V3 POTEC-204ENST00000620346 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC20.35■□□□□ 0.85
NCLNQ969V3 CPAMD8-202ENST00000388925 5355 ntTSL 5 BASIC20.35■□□□□ 0.85
NCLNQ969V3 CENPB-201ENST00000379751 2840 ntAPPRIS P1 BASIC20.35■□□□□ 0.85
NCLNQ969V3 DNAJB5-203ENST00000453597 2589 ntTSL 2 BASIC20.35■□□□□ 0.85
NCLNQ969V3 SSUH2-217ENST00000544814 1636 ntAPPRIS ALT2 TSL 2 BASIC20.35■□□□□ 0.85
NCLNQ969V3 SPHK1-202ENST00000392496 1779 ntAPPRIS P3 TSL 1 (best) BASIC20.34■□□□□ 0.85
NCLNQ969V3 SLAIN1-206ENST00000418532 2855 ntAPPRIS ALT2 TSL 5 BASIC20.34■□□□□ 0.85
NCLNQ969V3 EPN1-201ENST00000085079 2355 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
NCLNQ969V3 ATG4D-201ENST00000309469 1949 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
NCLNQ969V3 TSPY4-201ENST00000383008 1143 ntAPPRIS ALT2 TSL 5 BASIC20.34■□□□□ 0.85
NCLNQ969V3 MIR572-201ENST00000384983 95 ntBASIC20.34■□□□□ 0.85
NCLNQ969V3 AC010141.3-201ENST00000456659 717 ntBASIC20.34■□□□□ 0.85
NCLNQ969V3 AC009506.1-201ENST00000418474 1494 ntTSL 2 BASIC20.34■□□□□ 0.85
NCLNQ969V3 LAYN-201ENST00000375614 2066 ntAPPRIS P3 TSL 1 (best) BASIC20.34■□□□□ 0.85
NCLNQ969V3 SLC1A5-203ENST00000542575 2882 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
NCLNQ969V3 USP45-205ENST00000472914 1617 ntTSL 5 BASIC20.34■□□□□ 0.85
NCLNQ969V3 ZNF517-207ENST00000531720 1615 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
NCLNQ969V3 BARX2-201ENST00000281437 1813 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
NCLNQ969V3 DOCK9-206ENST00000427887 4176 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
NCLNQ969V3 TGFBR1-201ENST00000374990 5720 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
NCLNQ969V3 MED17-221ENST00000639724 2317 ntTSL 5 BASIC20.33■□□□□ 0.85
NCLNQ969V3 NUDT10-201ENST00000356450 1917 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
NCLNQ969V3 AL359710.1-201ENST00000427039 1544 ntTSL 2 BASIC20.33■□□□□ 0.85
NCLNQ969V3 SETD9-211ENST00000628593 1306 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
NCLNQ969V3 C1orf174-201ENST00000361605 1666 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
NCLNQ969V3 YAP1-201ENST00000282441 5386 ntAPPRIS P3 TSL 1 (best) BASIC20.33■□□□□ 0.85
NCLNQ969V3 WT1-210ENST00000639563 1494 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.85
NCLNQ969V3 DCAF4-202ENST00000358377 2024 ntAPPRIS P4 TSL 1 (best) BASIC20.33■□□□□ 0.85
NCLNQ969V3 TNFAIP8L3-202ENST00000637513 2002 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
NCLNQ969V3 PDK3-201ENST00000379162 1809 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
NCLNQ969V3 OTUB1-212ENST00000543988 1259 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
NCLNQ969V3 HERC2P4-206ENST00000568097 1062 ntTSL 5 BASIC20.33■□□□□ 0.85
NCLNQ969V3 AC010999.2-201ENST00000621974 596 ntTSL 2 BASIC20.33■□□□□ 0.85
NCLNQ969V3 SNRK-203ENST00000437827 1995 ntTSL 2 BASIC20.33■□□□□ 0.84
NCLNQ969V3 DUSP9-201ENST00000342782 2433 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
NCLNQ969V3 FPGS-202ENST00000373228 1383 ntTSL 5 BASIC20.33■□□□□ 0.84
NCLNQ969V3 PALM-202ENST00000338448 2725 ntAPPRIS P4 TSL 1 (best) BASIC20.33■□□□□ 0.84
NCLNQ969V3 BBC3-202ENST00000341983 1538 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
NCLNQ969V3 TSPAN3-202ENST00000346495 1647 ntTSL 2 BASIC20.32■□□□□ 0.84
NCLNQ969V3 Z98882.1-201ENST00000622160 2253 ntBASIC20.32■□□□□ 0.84
NCLNQ969V3 SCN1B-206ENST00000638536 1600 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
NCLNQ969V3 CCDC160-201ENST00000370809 1299 ntAPPRIS P1 TSL 5 BASIC20.32■□□□□ 0.84
NCLNQ969V3 PRDX4-202ENST00000379341 1005 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
NCLNQ969V3 SLC26A1-203ENST00000398520 1111 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
NCLNQ969V3 HES6-202ENST00000409002 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
NCLNQ969V3 AC061979.1-201ENST00000532061 434 ntTSL 5 BASIC20.32■□□□□ 0.84
NCLNQ969V3 SPRN-201ENST00000414069 3128 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
NCLNQ969V3 AQP6-201ENST00000315520 1398 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
NCLNQ969V3 ZXDC-201ENST00000336332 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
NCLNQ969V3 LSM14A-202ENST00000540746 2152 ntTSL 2 BASIC20.31■□□□□ 0.84
NCLNQ969V3 PHF10-202ENST00000366780 1589 ntAPPRIS ALT2 TSL 5 BASIC20.31■□□□□ 0.84
NCLNQ969V3 CERKL-205ENST00000409440 2425 ntTSL 2 BASIC20.31■□□□□ 0.84
NCLNQ969V3 NABP2-202ENST00000341463 1411 ntAPPRIS P1 TSL 3 BASIC20.31■□□□□ 0.84
NCLNQ969V3 XPA-201ENST00000375128 1417 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
NCLNQ969V3 LHPP-203ENST00000392757 840 ntTSL 3 BASIC20.31■□□□□ 0.84
NCLNQ969V3 POLR2F-203ENST00000407936 582 ntTSL 3 BASIC20.31■□□□□ 0.84
NCLNQ969V3 POLR2F-207ENST00000460648 518 ntTSL 4 BASIC20.31■□□□□ 0.84
NCLNQ969V3 RASGRP2-207ENST00000377497 2221 ntAPPRIS P2 TSL 1 (best) BASIC20.31■□□□□ 0.84
NCLNQ969V3 B4GAT1-201ENST00000311181 2072 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
NCLNQ969V3 ALKAL2-204ENST00000403610 1389 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
NCLNQ969V3 MDFI-203ENST00000373051 1622 ntAPPRIS P1 TSL 5 BASIC20.31■□□□□ 0.84
NCLNQ969V3 BOK-201ENST00000318407 2657 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
NCLNQ969V3 SLC25A24-204ENST00000569674 2357 ntBASIC20.3■□□□□ 0.84
NCLNQ969V3 UBE2Q1-201ENST00000292211 3210 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
NCLNQ969V3 NME4-201ENST00000219479 995 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
NCLNQ969V3 RPL8-201ENST00000262584 1041 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
NCLNQ969V3 CYC1-201ENST00000318911 1240 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
NCLNQ969V3 JTB-203ENST00000368589 1216 ntTSL 2 BASIC20.3■□□□□ 0.84
NCLNQ969V3 NINJ1-201ENST00000375446 1281 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
NCLNQ969V3 NME4-202ENST00000382940 766 ntTSL 3 BASIC20.3■□□□□ 0.84
NCLNQ969V3 FAM222B-213ENST00000583522 556 ntTSL 2 BASIC20.3■□□□□ 0.84
NCLNQ969V3 AC005775.1-201ENST00000592413 850 ntTSL 5 BASIC20.3■□□□□ 0.84
NCLNQ969V3 NME4-211ENST00000620944 1193 ntTSL 2 BASIC20.3■□□□□ 0.84
NCLNQ969V3 DTNBP1-201ENST00000338950 1880 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
NCLNQ969V3 SOX18-201ENST00000340356 1864 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
NCLNQ969V3 ATAD3A-202ENST00000378755 2612 ntTSL 2 BASIC20.3■□□□□ 0.84
NCLNQ969V3 LHFPL3-202ENST00000424859 1852 ntAPPRIS P5 TSL 1 (best) BASIC20.3■□□□□ 0.84
NCLNQ969V3 KLF13-201ENST00000307145 6825 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
NCLNQ969V3 TPTEP1-205ENST00000558085 1738 ntTSL 2 BASIC20.3■□□□□ 0.84
NCLNQ969V3 TMEM250-205ENST00000561457 2804 ntAPPRIS P1 TSL 2 BASIC20.3■□□□□ 0.84
NCLNQ969V3 ECE2-203ENST00000359140 3147 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
NCLNQ969V3 ANKRD53-204ENST00000457410 1671 ntTSL 5 BASIC20.29■□□□□ 0.84
NCLNQ969V3 ALDH5A1-204ENST00000491546 1699 ntTSL 5 BASIC20.29■□□□□ 0.84
NCLNQ969V3 RBBP7-202ENST00000380084 2036 ntTSL 2 BASIC20.29■□□□□ 0.84
NCLNQ969V3 RELL2-205ENST00000518856 1419 ntTSL 5 BASIC20.29■□□□□ 0.84
NCLNQ969V3 ZFAND2B-202ENST00000409097 1765 ntTSL 2 BASIC20.29■□□□□ 0.84
NCLNQ969V3 STAP2-206ENST00000600324 1508 ntAPPRIS P3 TSL 2 BASIC20.29■□□□□ 0.84
NCLNQ969V3 LINC01167-201ENST00000423232 604 ntTSL 3 BASIC20.29■□□□□ 0.84
NCLNQ969V3 PPM1N-207ENST00000451287 1293 ntAPPRIS P1 TSL 5 BASIC20.29■□□□□ 0.84
NCLNQ969V3 LRRC75A-AS1-202ENST00000470491 1057 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Retrieved 100 of 98,524 protein–RNA pairs in 19.5 ms