Protein–RNA interactions for Protein: Q92572

AP3S1, AP-3 complex subunit sigma-1, humanhuman

Predictions only

Length 193 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP3S1Q92572 FAM117B-201ENST00000392238 5763 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
AP3S1Q92572 GATA6-AS1-202ENST00000583490 1788 ntTSL 2 BASIC18.55■□□□□ 0.56
AP3S1Q92572 PDLIM3-212ENST00000620787 2352 ntTSL 4 BASIC18.55■□□□□ 0.56
AP3S1Q92572 TDRD10-202ENST00000368482 2331 ntAPPRIS P3 TSL 1 (best) BASIC18.55■□□□□ 0.56
AP3S1Q92572 NAB2-201ENST00000300131 2711 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
AP3S1Q92572 TMC5-203ENST00000396229 4917 ntAPPRIS ALT2 TSL 5 BASIC18.55■□□□□ 0.56
AP3S1Q92572 ESRRA-202ENST00000405666 2283 ntAPPRIS P3 TSL 1 (best) BASIC18.55■□□□□ 0.56
AP3S1Q92572 RGMB-207ENST00000513185 2052 ntAPPRIS ALT2 TSL 2 BASIC18.55■□□□□ 0.56
AP3S1Q92572 PARP2-202ENST00000429687 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
AP3S1Q92572 FNDC4-201ENST00000264703 1657 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
AP3S1Q92572 STMN4-201ENST00000265770 1250 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
AP3S1Q92572 PIGX-201ENST00000296333 953 ntAPPRIS ALT2 TSL 2 BASIC18.55■□□□□ 0.56
AP3S1Q92572 HCN2-201ENST00000251287 3408 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
AP3S1Q92572 SPHK1-203ENST00000545180 2238 ntAPPRIS P3 TSL 2 BASIC18.55■□□□□ 0.56
AP3S1Q92572 TANGO2-202ENST00000398042 2011 ntTSL 2 BASIC18.55■□□□□ 0.56
AP3S1Q92572 PDXDC1-205ENST00000535621 2048 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
AP3S1Q92572 RUVBL2-206ENST00000595090 2009 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
AP3S1Q92572 DCTD-202ENST00000438320 1972 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
AP3S1Q92572 ACAD8-202ENST00000374752 1797 ntTSL 2 BASIC18.55■□□□□ 0.56
AP3S1Q92572 DTX2-212ENST00000446820 1770 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
AP3S1Q92572 PDCD2-204ENST00000453163 2657 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
AP3S1Q92572 HTATIP2-204ENST00000451739 1748 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
AP3S1Q92572 SLC35E4-202ENST00000406566 2081 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
AP3S1Q92572 ADAM9-203ENST00000466936 2053 ntTSL 2 BASIC18.54■□□□□ 0.56
AP3S1Q92572 MFSD3-201ENST00000301327 1548 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
AP3S1Q92572 TPBGL-201ENST00000562197 2793 ntAPPRIS P1 BASIC18.54■□□□□ 0.56
AP3S1Q92572 QKI-205ENST00000392127 7911 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
AP3S1Q92572 AC005703.6-201ENST00000623265 1329 ntBASIC18.54■□□□□ 0.56
AP3S1Q92572 MAIP1-201ENST00000295079 1495 ntAPPRIS P2 TSL 2 BASIC18.54■□□□□ 0.56
AP3S1Q92572 AMZ2-219ENST00000612294 1498 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
AP3S1Q92572 PYCR3-207ENST00000495276 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
AP3S1Q92572 SLC35A2-210ENST00000616181 1614 ntTSL 2 BASIC18.54■□□□□ 0.56
AP3S1Q92572 TCIRG1-213ENST00000532635 2457 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
AP3S1Q92572 RSPO4-202ENST00000400634 722 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
AP3S1Q92572 AC079089.2-201ENST00000531211 1277 ntBASIC18.54■□□□□ 0.56
AP3S1Q92572 NPW-202ENST00000566435 991 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
AP3S1Q92572 MDFIC-208ENST00000614186 1068 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
AP3S1Q92572 NFIB-207ENST00000397579 3129 ntTSL 5 BASIC18.54■□□□□ 0.56
AP3S1Q92572 ENGASE-205ENST00000579016 2579 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
AP3S1Q92572 TMEM189-201ENST00000371650 2222 ntAPPRIS ALT1 TSL 1 (best) BASIC18.54■□□□□ 0.56
AP3S1Q92572 SLC29A4-202ENST00000396872 5685 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
AP3S1Q92572 SENP5-204ENST00000445299 2491 ntTSL 2 BASIC18.54■□□□□ 0.56
AP3S1Q92572 RREB1-203ENST00000379933 5826 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
AP3S1Q92572 SCUBE1-201ENST00000290460 2258 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
AP3S1Q92572 SMIM19-203ENST00000417410 1466 ntAPPRIS P1 TSL 2 BASIC18.53■□□□□ 0.56
AP3S1Q92572 USP45-205ENST00000472914 1617 ntTSL 5 BASIC18.53■□□□□ 0.56
AP3S1Q92572 HPCAL1-201ENST00000307845 1751 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
AP3S1Q92572 SLC16A5-201ENST00000329783 1934 ntAPPRIS P2 TSL 1 (best) BASIC18.53■□□□□ 0.56
AP3S1Q92572 IQSEC2-218ENST00000640694 5958 ntAPPRIS ALT2 TSL 5 BASIC18.53■□□□□ 0.56
AP3S1Q92572 TOR1B-201ENST00000259339 2769 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
AP3S1Q92572 SCAND1-202ENST00000373991 1727 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
AP3S1Q92572 C5orf38-202ENST00000397835 681 ntAPPRIS ALT2 TSL 5 BASIC18.53■□□□□ 0.56
AP3S1Q92572 C22orf34-203ENST00000405854 1593 ntTSL 5 BASIC18.53■□□□□ 0.56
AP3S1Q92572 AC148477.1-201ENST00000537720 476 ntTSL 3 BASIC18.53■□□□□ 0.56
AP3S1Q92572 OR7E47P-201ENST00000546390 1422 ntBASIC18.53■□□□□ 0.56
AP3S1Q92572 FAM222B-205ENST00000577682 549 ntTSL 4 BASIC18.53■□□□□ 0.56
AP3S1Q92572 SYNGR2-203ENST00000588282 1553 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
AP3S1Q92572 TBX2-AS1-203ENST00000590421 861 ntTSL 2 BASIC18.53■□□□□ 0.56
AP3S1Q92572 AC018553.2-201ENST00000637770 1064 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
AP3S1Q92572 AC145124.1-201ENST00000528514 1361 ntTSL 2 BASIC18.53■□□□□ 0.56
AP3S1Q92572 LYSMD2-201ENST00000267838 1759 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
AP3S1Q92572 MAF1-205ENST00000534585 1754 ntTSL 5 BASIC18.53■□□□□ 0.56
AP3S1Q92572 SNRNP70-201ENST00000221448 1603 ntTSL 2 BASIC18.52■□□□□ 0.56
AP3S1Q92572 C1orf198-201ENST00000366663 3858 ntAPPRIS P3 TSL 1 (best) BASIC18.52■□□□□ 0.56
AP3S1Q92572 DNAAF3-202ENST00000455045 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.56
AP3S1Q92572 STX4-201ENST00000313843 1481 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
AP3S1Q92572 BCL7B-202ENST00000411832 1458 ntTSL 2 BASIC18.52■□□□□ 0.56
AP3S1Q92572 GNS-208ENST00000543646 2164 ntAPPRIS ALT2 TSL 2 BASIC18.52■□□□□ 0.56
AP3S1Q92572 CNTNAP3B-212ENST00000617422 2170 ntTSL 2 BASIC18.52■□□□□ 0.56
AP3S1Q92572 TPD52-209ENST00000518937 2856 ntTSL 2 BASIC18.52■□□□□ 0.56
AP3S1Q92572 NR2F2-204ENST00000453270 1712 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
AP3S1Q92572 CCDC151-201ENST00000356392 2107 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
AP3S1Q92572 ZSWIM5-201ENST00000359600 5819 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
AP3S1Q92572 DPF1-203ENST00000414789 1960 ntTSL 2 BASIC18.52■□□□□ 0.56
AP3S1Q92572 UBALD1-201ENST00000283474 1413 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
AP3S1Q92572 MTERF3-201ENST00000287025 1409 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
AP3S1Q92572 TXNRD2-203ENST00000400519 3155 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.56
AP3S1Q92572 MRPL51-201ENST00000229238 1234 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
AP3S1Q92572 AC139795.1-203ENST00000515045 853 ntTSL 2 BASIC18.52■□□□□ 0.56
AP3S1Q92572 UBE2I-213ENST00000566587 1098 ntAPPRIS P1 TSL 2 BASIC18.52■□□□□ 0.56
AP3S1Q92572 DUSP22-214ENST00000605315 867 ntTSL 5 BASIC18.52■□□□□ 0.56
AP3S1Q92572 ERO1A-211ENST00000629528 998 ntTSL 5 BASIC18.52■□□□□ 0.56
AP3S1Q92572 LIMS2-207ENST00000409808 2315 ntAPPRIS ALT1 TSL 5 BASIC18.52■□□□□ 0.56
AP3S1Q92572 PLEKHG5-206ENST00000377748 5221 ntAPPRIS ALT2 TSL 2 BASIC18.52■□□□□ 0.56
AP3S1Q92572 BAALC-203ENST00000309982 2831 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
AP3S1Q92572 CDK13-207ENST00000613626 3099 ntTSL 5 BASIC18.52■□□□□ 0.55
AP3S1Q92572 SRSF4-201ENST00000373795 2387 ntAPPRIS P2 TSL 1 (best) BASIC18.52■□□□□ 0.55
AP3S1Q92572 CENPS-CORT-201ENST00000400900 1469 ntTSL 2 BASIC18.52■□□□□ 0.55
AP3S1Q92572 GXYLT1-202ENST00000398675 7497 ntAPPRIS P4 TSL 1 (best) BASIC18.52■□□□□ 0.55
AP3S1Q92572 HNRNPA3-204ENST00000435711 1731 ntAPPRIS P3 TSL 1 (best) BASIC18.52■□□□□ 0.55
AP3S1Q92572 TLE3-216ENST00000559191 1575 ntTSL 5 BASIC18.51■□□□□ 0.55
AP3S1Q92572 NFATC2IP-201ENST00000320805 4569 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
AP3S1Q92572 INPP1-201ENST00000322522 1919 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
AP3S1Q92572 SUMO3-204ENST00000411651 1921 ntTSL 2 BASIC18.51■□□□□ 0.55
AP3S1Q92572 AGO4-201ENST00000373210 7116 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
AP3S1Q92572 GBX1-201ENST00000297537 1092 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
AP3S1Q92572 AC139795.1-202ENST00000500444 432 ntBASIC18.51■□□□□ 0.55
AP3S1Q92572 NDEL1-219ENST00000585098 454 ntTSL 3 BASIC18.51■□□□□ 0.55
AP3S1Q92572 SSX2IP-209ENST00000603677 1149 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
AP3S1Q92572 MIR7108-201ENST00000614319 87 ntBASIC18.51■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 26.2 ms