Protein–RNA interactions for Protein: Q8NHG7

SVIP, Small VCP/p97-interacting protein, humanhuman

Predictions only

Length 77 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SVIPQ8NHG7 NTRK3-AS1-201ENST00000569588 2663 ntTSL 2 BASIC13.37□□□□□ -0.27
SVIPQ8NHG7 PCDHAC2-203ENST00000615316 3011 ntBASIC13.37□□□□□ -0.27
SVIPQ8NHG7 RIMBP3C-201ENST00000331505 5475 ntAPPRIS ALT2 BASIC13.37□□□□□ -0.27
SVIPQ8NHG7 C5orf30-202ENST00000510890 2933 ntAPPRIS P1 TSL 2 BASIC13.37□□□□□ -0.27
SVIPQ8NHG7 ILDR2-204ENST00000525740 2242 ntTSL 5 BASIC13.37□□□□□ -0.27
SVIPQ8NHG7 TFCP2-204ENST00000548115 1862 ntTSL 5 BASIC13.37□□□□□ -0.27
SVIPQ8NHG7 RNF150-204ENST00000507500 1530 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
SVIPQ8NHG7 AC005052.1-201ENST00000625181 2492 ntBASIC13.37□□□□□ -0.27
SVIPQ8NHG7 ITGBL1-207ENST00000622834 2369 ntTSL 5 BASIC13.37□□□□□ -0.27
SVIPQ8NHG7 SLC29A2-201ENST00000311161 2262 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
SVIPQ8NHG7 NUDT10-201ENST00000356450 1917 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
SVIPQ8NHG7 FBXW11-203ENST00000393802 2181 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
SVIPQ8NHG7 DNAJA3-202ENST00000355296 2591 ntAPPRIS ALT1 TSL 1 (best) BASIC13.36□□□□□ -0.27
SVIPQ8NHG7 ARHGAP26-202ENST00000378004 9200 ntAPPRIS ALT1 TSL 1 (best) BASIC13.36□□□□□ -0.27
SVIPQ8NHG7 MIB2-232ENST00000520777 3321 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
SVIPQ8NHG7 MTMR12-203ENST00000382142 5187 ntAPPRIS P3 TSL 1 (best) BASIC13.36□□□□□ -0.27
SVIPQ8NHG7 RASL11B-201ENST00000248706 1995 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
SVIPQ8NHG7 WLS-201ENST00000262348 2748 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
SVIPQ8NHG7 HTRA1-201ENST00000368984 2120 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
SVIPQ8NHG7 CHD1L-203ENST00000369259 2358 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
SVIPQ8NHG7 AC097639.1-201ENST00000565519 1891 ntBASIC13.36□□□□□ -0.27
SVIPQ8NHG7 PHF12-202ENST00000332830 4759 ntAPPRIS P1 TSL 2 BASIC13.36□□□□□ -0.27
SVIPQ8NHG7 PODXL2-201ENST00000342480 2186 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
SVIPQ8NHG7 TMEM221-201ENST00000341130 1930 ntAPPRIS P1 TSL 2 BASIC13.36□□□□□ -0.27
SVIPQ8NHG7 PPP5C-202ENST00000391919 1929 ntTSL 5 BASIC13.36□□□□□ -0.27
SVIPQ8NHG7 CPEB3-203ENST00000614585 5789 ntAPPRIS P3 TSL 5 BASIC13.36□□□□□ -0.27
SVIPQ8NHG7 COL4A3BP-203ENST00000380494 5651 ntTSL 2 BASIC13.36□□□□□ -0.27
SVIPQ8NHG7 AFG3L2-201ENST00000269143 3247 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
SVIPQ8NHG7 VSX2-201ENST00000261980 2995 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
SVIPQ8NHG7 CHST6-202ENST00000390664 2093 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
SVIPQ8NHG7 SDC2-202ENST00000518385 1583 ntTSL 5 BASIC13.36□□□□□ -0.27
SVIPQ8NHG7 AL079303.2-201ENST00000555107 2613 ntTSL 3 BASIC13.36□□□□□ -0.27
SVIPQ8NHG7 VSIR-201ENST00000394957 4689 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
SVIPQ8NHG7 LRRN4-201ENST00000378858 2692 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
SVIPQ8NHG7 PIF1-202ENST00000333425 2278 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
SVIPQ8NHG7 LCORL-201ENST00000326877 5604 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
SVIPQ8NHG7 ZNF131-206ENST00000505606 3209 ntAPPRIS P1 TSL 5 BASIC13.35□□□□□ -0.27
SVIPQ8NHG7 SFMBT2-203ENST00000379713 2402 ntTSL 2 BASIC13.35□□□□□ -0.27
SVIPQ8NHG7 EN2-201ENST00000297375 3395 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
SVIPQ8NHG7 CDCA5-201ENST00000275517 2587 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
SVIPQ8NHG7 MOGS-205ENST00000452063 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
SVIPQ8NHG7 AC138430.1-201ENST00000586064 5409 ntTSL 2 BASIC13.35□□□□□ -0.27
SVIPQ8NHG7 PRKRIP1-201ENST00000397912 2159 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
SVIPQ8NHG7 CDK13-202ENST00000340829 5066 ntAPPRIS ALT1 TSL 1 (best) BASIC13.35□□□□□ -0.27
SVIPQ8NHG7 SERINC2-206ENST00000536859 2072 ntTSL 2 BASIC13.35□□□□□ -0.27
SVIPQ8NHG7 USH1C-202ENST00000318024 2237 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
SVIPQ8NHG7 TNIP1-205ENST00000518977 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
SVIPQ8NHG7 ACSS2-201ENST00000253382 2925 ntTSL 2 BASIC13.35□□□□□ -0.27
SVIPQ8NHG7 EML2-220ENST00000589876 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
SVIPQ8NHG7 PAX7-201ENST00000375375 2260 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
SVIPQ8NHG7 PAPOLA-223ENST00000557320 3264 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
SVIPQ8NHG7 SLC43A1-201ENST00000278426 2598 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
SVIPQ8NHG7 DIABLO-208ENST00000464942 2569 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
SVIPQ8NHG7 DPP6-202ENST00000377770 3710 ntAPPRIS P4 TSL 1 (best) BASIC13.35□□□□□ -0.27
SVIPQ8NHG7 ITSN2-201ENST00000355123 6300 ntAPPRIS P4 TSL 1 (best) BASIC13.35□□□□□ -0.27
SVIPQ8NHG7 DYDC2-202ENST00000372197 2022 ntAPPRIS P3 TSL 1 (best) BASIC13.35□□□□□ -0.27
SVIPQ8NHG7 LMLN-210ENST00000482695 2010 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
SVIPQ8NHG7 GOLGA2P9-203ENST00000600260 2033 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
SVIPQ8NHG7 TINAGL1-201ENST00000271064 2187 ntAPPRIS P3 TSL 1 (best) BASIC13.35□□□□□ -0.27
SVIPQ8NHG7 WNK2-201ENST00000297954 7138 ntAPPRIS P2 TSL 1 (best) BASIC13.35□□□□□ -0.27
SVIPQ8NHG7 FMO5-201ENST00000254090 2632 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
SVIPQ8NHG7 AC073869.1-201ENST00000415574 2762 ntBASIC13.35□□□□□ -0.27
SVIPQ8NHG7 MAU2-201ENST00000262815 4994 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
SVIPQ8NHG7 KDM1A-202ENST00000400181 3059 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
SVIPQ8NHG7 SMCHD1-201ENST00000320876 8821 ntAPPRIS P1 TSL 5 BASIC13.35□□□□□ -0.27
SVIPQ8NHG7 CMTM3-214ENST00000567572 1934 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
SVIPQ8NHG7 CSPG5-203ENST00000456150 2089 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
SVIPQ8NHG7 DNAJB5-201ENST00000312316 2391 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
SVIPQ8NHG7 TMC6-203ENST00000392467 2833 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
SVIPQ8NHG7 CDH24-204ENST00000487137 3438 ntAPPRIS P1 TSL 5 BASIC13.35□□□□□ -0.27
SVIPQ8NHG7 ADGRG2-209ENST00000379876 4779 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
SVIPQ8NHG7 OPRD1-201ENST00000234961 9345 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
SVIPQ8NHG7 DACT1-202ENST00000395153 3734 ntAPPRIS ALT2 TSL 5 BASIC13.34□□□□□ -0.27
SVIPQ8NHG7 NLGN2-204ENST00000575301 4374 ntAPPRIS P1 TSL 5 BASIC13.34□□□□□ -0.27
SVIPQ8NHG7 ADAMTS7-201ENST00000388820 5490 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
SVIPQ8NHG7 CTDNEP1-208ENST00000573600 1724 ntAPPRIS P1 TSL 5 BASIC13.34□□□□□ -0.27
SVIPQ8NHG7 REXO1-201ENST00000170168 4591 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
SVIPQ8NHG7 TRIM45-202ENST00000369461 2415 ntTSL 5 BASIC13.34□□□□□ -0.27
SVIPQ8NHG7 CPEB1-218ENST00000620182 2422 ntTSL 2 BASIC13.34□□□□□ -0.27
SVIPQ8NHG7 AGTR1-203ENST00000404754 2252 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
SVIPQ8NHG7 NR4A1-203ENST00000394824 2639 ntAPPRIS P1 TSL 5 BASIC13.34□□□□□ -0.27
SVIPQ8NHG7 COX20-203ENST00000411948 2631 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
SVIPQ8NHG7 VSTM2L-202ENST00000373461 1959 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
SVIPQ8NHG7 PRDM12-201ENST00000253008 2476 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
SVIPQ8NHG7 NF2-209ENST00000403999 2999 ntAPPRIS ALT1 TSL 1 (best) BASIC13.34□□□□□ -0.27
SVIPQ8NHG7 SEPT8-205ENST00000378701 1817 ntTSL 2 BASIC13.34□□□□□ -0.27
SVIPQ8NHG7 SLCO4A1-202ENST00000370507 2665 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
SVIPQ8NHG7 TMSB15B-201ENST00000419165 1666 ntAPPRIS P1 TSL 2 BASIC13.34□□□□□ -0.27
SVIPQ8NHG7 GPR132-202ENST00000392585 2887 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
SVIPQ8NHG7 SRGAP2B-207ENST00000641863 2367 ntAPPRIS P5 BASIC13.34□□□□□ -0.27
SVIPQ8NHG7 PBX1-219ENST00000560641 3225 ntTSL 5 BASIC13.34□□□□□ -0.27
SVIPQ8NHG7 MDGA1-203ENST00000434837 10736 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
SVIPQ8NHG7 TTBK1-202ENST00000304139 2449 ntTSL 5 BASIC13.33□□□□□ -0.27
SVIPQ8NHG7 SLCO4A1-201ENST00000217159 2776 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
SVIPQ8NHG7 QRICH1-202ENST00000395443 3549 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
SVIPQ8NHG7 LENG8-209ENST00000616932 2825 ntAPPRIS ALT2 TSL 5 BASIC13.33□□□□□ -0.28
SVIPQ8NHG7 GRK5-202ENST00000392870 2654 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
SVIPQ8NHG7 MCTP1-218ENST00000515393 5396 ntAPPRIS P3 TSL 1 (best) BASIC13.33□□□□□ -0.28
SVIPQ8NHG7 GOLGA2P7-201ENST00000316967 2525 ntTSL 2 BASIC13.33□□□□□ -0.28
SVIPQ8NHG7 TOM1L1-221ENST00000575882 2507 ntAPPRIS P2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Retrieved 100 of 98,524 protein–RNA pairs in 27.2 ms