Protein–RNA interactions for Protein: Q8N967

LRTM2, Leucine-rich repeat and transmembrane domain-containing protein 2, humanhuman

Predictions only

Length 370 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRTM2Q8N967 ARHGAP5-203ENST00000396582 5786 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
LRTM2Q8N967 DDIT4-201ENST00000307365 1748 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
LRTM2Q8N967 ZBED3-201ENST00000255198 6172 ntAPPRIS P2 TSL 1 (best) BASIC17.23■□□□□ 0.35
LRTM2Q8N967 SYNC-201ENST00000373484 1824 ntAPPRIS ALT2 TSL 2 BASIC17.23■□□□□ 0.35
LRTM2Q8N967 SOCS7-202ENST00000613678 1827 ntTSL 5 BASIC17.23■□□□□ 0.35
LRTM2Q8N967 PTPRJ-208ENST00000615445 4773 ntAPPRIS ALT2 TSL 5 BASIC17.23■□□□□ 0.35
LRTM2Q8N967 MBD1-216ENST00000587605 1945 ntTSL 2 BASIC17.23■□□□□ 0.35
LRTM2Q8N967 GNB1L-202ENST00000403325 1699 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
LRTM2Q8N967 GRIN1-208ENST00000371561 5149 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
LRTM2Q8N967 TRIM15-210ENST00000619857 2217 ntTSL 5 BASIC17.23■□□□□ 0.35
LRTM2Q8N967 SHB-201ENST00000377707 2783 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
LRTM2Q8N967 C12orf76-203ENST00000546651 1755 ntTSL 2 BASIC17.23■□□□□ 0.35
LRTM2Q8N967 CRTAC1-203ENST00000370597 2890 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
LRTM2Q8N967 PPP4C-214ENST00000627746 1301 ntTSL 5 BASIC17.22■□□□□ 0.35
LRTM2Q8N967 RXFP3-201ENST00000330120 1852 ntAPPRIS P1 BASIC17.22■□□□□ 0.35
LRTM2Q8N967 PCDHA13-203ENST00000617769 2427 ntAPPRIS ALT2 BASIC17.22■□□□□ 0.35
LRTM2Q8N967 CNNM4-201ENST00000377075 4800 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
LRTM2Q8N967 BASP1-203ENST00000616743 1711 ntAPPRIS P1 TSL 3 BASIC17.22■□□□□ 0.35
LRTM2Q8N967 C7orf49-213ENST00000617987 1727 ntTSL 5 BASIC17.22■□□□□ 0.35
LRTM2Q8N967 CD55-205ENST00000367067 1843 ntAPPRIS ALT2 TSL 5 BASIC17.22■□□□□ 0.35
LRTM2Q8N967 CTU2-210ENST00000567949 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
LRTM2Q8N967 SMUG1-203ENST00000401977 1082 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
LRTM2Q8N967 OR2I1P-207ENST00000453522 948 ntBASIC17.22■□□□□ 0.35
LRTM2Q8N967 NKIRAS2-209ENST00000479407 992 ntTSL 3 BASIC17.22■□□□□ 0.35
LRTM2Q8N967 AC092343.1-201ENST00000500224 729 ntTSL 3 BASIC17.22■□□□□ 0.35
LRTM2Q8N967 KRAS-204ENST00000557334 1052 ntTSL 5 BASIC17.22■□□□□ 0.35
LRTM2Q8N967 Z97653.1-201ENST00000567096 446 ntTSL 3 BASIC17.22■□□□□ 0.35
LRTM2Q8N967 DSG2-202ENST00000585206 1081 ntTSL 2 BASIC17.22■□□□□ 0.35
LRTM2Q8N967 EBF1-202ENST00000380654 2345 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
LRTM2Q8N967 CACNA1B-201ENST00000277549 7158 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
LRTM2Q8N967 CACNA1B-202ENST00000277551 7158 ntAPPRIS ALT2 TSL 5 BASIC17.22■□□□□ 0.35
LRTM2Q8N967 RAB11FIP4-211ENST00000621161 8628 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
LRTM2Q8N967 AC027702.1-201ENST00000563810 1770 ntBASIC17.22■□□□□ 0.35
LRTM2Q8N967 KLC1-208ENST00000452929 2453 ntTSL 5 BASIC17.22■□□□□ 0.35
LRTM2Q8N967 AC020907.5-201ENST00000624372 1936 ntBASIC17.21■□□□□ 0.35
LRTM2Q8N967 UBE2F-201ENST00000272930 2009 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
LRTM2Q8N967 SNX32-201ENST00000308342 2003 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
LRTM2Q8N967 AC016065.1-201ENST00000500118 2413 ntTSL 2 BASIC17.21■□□□□ 0.35
LRTM2Q8N967 LACTB-202ENST00000413507 2978 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
LRTM2Q8N967 NRP2-206ENST00000417189 2386 ntTSL 2 BASIC17.21■□□□□ 0.35
LRTM2Q8N967 MAPK9-206ENST00000425491 2266 ntTSL 5 BASIC17.21■□□□□ 0.35
LRTM2Q8N967 C2orf82-201ENST00000331342 465 ntAPPRIS P2 TSL 1 (best) BASIC17.21■□□□□ 0.35
LRTM2Q8N967 CLPSL2-202ENST00000403376 405 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.35
LRTM2Q8N967 NDUFAF8-201ENST00000431388 615 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
LRTM2Q8N967 QDPR-208ENST00000513615 1188 ntTSL 2 BASIC17.21■□□□□ 0.35
LRTM2Q8N967 pRNA.6-201ENST00000610482 90 ntBASIC17.21■□□□□ 0.35
LRTM2Q8N967 pRNA.5-201ENST00000612139 90 ntBASIC17.21■□□□□ 0.35
LRTM2Q8N967 pRNA.11-201ENST00000618423 90 ntBASIC17.21■□□□□ 0.35
LRTM2Q8N967 pRNA.13-201ENST00000619112 90 ntBASIC17.21■□□□□ 0.35
LRTM2Q8N967 AL117332.1-201ENST00000622628 974 ntBASIC17.21■□□□□ 0.35
LRTM2Q8N967 FSTL3-201ENST00000166139 2542 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
LRTM2Q8N967 NARS2-201ENST00000281038 2519 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
LRTM2Q8N967 MAP3K21-203ENST00000366624 5809 ntAPPRIS P2 TSL 1 (best) BASIC17.21■□□□□ 0.35
LRTM2Q8N967 SCRT1-201ENST00000569446 3779 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
LRTM2Q8N967 MRFAP1-201ENST00000320912 2049 ntAPPRIS P1 TSL 2 BASIC17.21■□□□□ 0.35
LRTM2Q8N967 Z83844.2-201ENST00000456099 1945 ntTSL 2 BASIC17.21■□□□□ 0.35
LRTM2Q8N967 UCHL5-201ENST00000367448 1534 ntTSL 1 (best) BASIC17.21■□□□□ 0.34
LRTM2Q8N967 ME2-218ENST00000640965 2476 ntTSL 5 BASIC17.21■□□□□ 0.34
LRTM2Q8N967 HOXA11-201ENST00000006015 2295 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
LRTM2Q8N967 TPST2-202ENST00000398110 1968 ntAPPRIS P1 TSL 2 BASIC17.2■□□□□ 0.34
LRTM2Q8N967 KCNK12-201ENST00000327876 6227 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
LRTM2Q8N967 C2CD4B-201ENST00000380392 1579 ntAPPRIS P1 TSL 2 BASIC17.2■□□□□ 0.34
LRTM2Q8N967 PKM-215ENST00000565154 2004 ntAPPRIS ALT1 TSL 2 BASIC17.2■□□□□ 0.34
LRTM2Q8N967 REV1-201ENST00000258428 4751 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
LRTM2Q8N967 TRABD2A-201ENST00000335459 1844 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
LRTM2Q8N967 ARFIP2-205ENST00000525235 852 ntTSL 2 BASIC17.2■□□□□ 0.34
LRTM2Q8N967 DDX55-205ENST00000538744 1735 ntTSL 5 BASIC17.2■□□□□ 0.34
LRTM2Q8N967 BRSK2-201ENST00000308219 4089 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
LRTM2Q8N967 PARD3-208ENST00000374789 6005 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
LRTM2Q8N967 ZNF579-201ENST00000325421 2899 ntAPPRIS P1 TSL 2 BASIC17.2■□□□□ 0.34
LRTM2Q8N967 IGFBP3-210ENST00000613132 2412 ntTSL 5 BASIC17.2■□□□□ 0.34
LRTM2Q8N967 POFUT1-201ENST00000375730 1507 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
LRTM2Q8N967 NIPA2-205ENST00000539711 1412 ntTSL 2 BASIC17.2■□□□□ 0.34
LRTM2Q8N967 GPR35-201ENST00000319838 2249 ntAPPRIS P3 TSL 2 BASIC17.2■□□□□ 0.34
LRTM2Q8N967 EIPR1-206ENST00000443925 1771 ntTSL 3 BASIC17.2■□□□□ 0.34
LRTM2Q8N967 HES5-201ENST00000378453 1306 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
LRTM2Q8N967 CDCA4-201ENST00000336219 2513 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
LRTM2Q8N967 GPAA1-202ENST00000361036 1840 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
LRTM2Q8N967 SLC16A3-201ENST00000392339 2074 ntAPPRIS P1 TSL 5 BASIC17.19■□□□□ 0.34
LRTM2Q8N967 SLC16A3-202ENST00000392341 2086 ntAPPRIS P1 TSL 5 BASIC17.19■□□□□ 0.34
LRTM2Q8N967 AC007249.2-201ENST00000553181 1737 ntTSL 5 BASIC17.19■□□□□ 0.34
LRTM2Q8N967 TMED4-203ENST00000457408 2322 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
LRTM2Q8N967 PAX1-202ENST00000444366 1850 ntAPPRIS ALT2 TSL 2 BASIC17.19■□□□□ 0.34
LRTM2Q8N967 WDR4-202ENST00000398208 2122 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
LRTM2Q8N967 PTGER2-201ENST00000245457 2383 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
LRTM2Q8N967 SPG7-202ENST00000341316 2288 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
LRTM2Q8N967 NYX-202ENST00000378220 2297 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
LRTM2Q8N967 AP004607.7-201ENST00000527152 1677 ntBASIC17.19■□□□□ 0.34
LRTM2Q8N967 HPS6-201ENST00000299238 2649 ntAPPRIS P1 BASIC17.18■□□□□ 0.34
LRTM2Q8N967 FAM189B-201ENST00000350210 2379 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
LRTM2Q8N967 FGF14-IT1-202ENST00000607251 2123 ntTSL 2 BASIC17.18■□□□□ 0.34
LRTM2Q8N967 ABLIM2-204ENST00000407564 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
LRTM2Q8N967 NRXN1-202ENST00000342183 3315 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
LRTM2Q8N967 NARF-205ENST00000412079 1760 ntTSL 5 BASIC17.18■□□□□ 0.34
LRTM2Q8N967 BRD4-202ENST00000360016 3240 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
LRTM2Q8N967 HOXA11-AS-204ENST00000522674 1549 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
LRTM2Q8N967 AFDN-202ENST00000351017 5823 ntTSL 5 BASIC17.18■□□□□ 0.34
LRTM2Q8N967 CDKN3-202ENST00000335183 893 ntAPPRIS P2 TSL 1 (best) BASIC17.18■□□□□ 0.34
LRTM2Q8N967 HMX3-201ENST00000357878 1173 ntAPPRIS P1 TSL 2 BASIC17.18■□□□□ 0.34
LRTM2Q8N967 TMEM218-209ENST00000529583 848 ntAPPRIS P1 TSL 3 BASIC17.18■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 39.1 ms