Protein–RNA interactions for Protein: Q8IYI8

ZNF440, Zinc finger protein 440, humanhuman

Predictions only

Length 595 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF440Q8IYI8 TSPY4-201ENST00000383008 1143 ntAPPRIS ALT2 TSL 5 BASIC19.29■□□□□ 0.68
ZNF440Q8IYI8 NUDT14-202ENST00000392568 845 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
ZNF440Q8IYI8 JARID2-AS1-201ENST00000441978 455 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
ZNF440Q8IYI8 STOX2-205ENST00000513034 807 ntTSL 3 BASIC19.29■□□□□ 0.68
ZNF440Q8IYI8 GLI4-210ENST00000523522 1297 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
ZNF440Q8IYI8 POLR2E-214ENST00000619917 932 ntTSL 5 BASIC19.29■□□□□ 0.68
ZNF440Q8IYI8 RBKS-201ENST00000302188 1973 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
ZNF440Q8IYI8 COCH-205ENST00000475087 1997 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
ZNF440Q8IYI8 BICRA-204ENST00000614245 5697 ntAPPRIS ALT2 TSL 5 BASIC19.29■□□□□ 0.68
ZNF440Q8IYI8 ERLEC1-203ENST00000405123 1756 ntTSL 5 BASIC19.29■□□□□ 0.68
ZNF440Q8IYI8 C8orf82-201ENST00000313465 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
ZNF440Q8IYI8 OLIG3-201ENST00000367734 2049 ntAPPRIS P1 BASIC19.29■□□□□ 0.68
ZNF440Q8IYI8 OTOP1-201ENST00000296358 1864 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
ZNF440Q8IYI8 KIF12-202ENST00000468460 2162 ntAPPRIS ALT2 TSL 5 BASIC19.28■□□□□ 0.68
ZNF440Q8IYI8 CLPSL2-201ENST00000360454 488 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
ZNF440Q8IYI8 RNF146-206ENST00000480444 843 ntTSL 2 BASIC19.28■□□□□ 0.68
ZNF440Q8IYI8 ARHGAP24-206ENST00000503995 1273 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
ZNF440Q8IYI8 MFF-207ENST00000409565 1548 ntTSL 2 BASIC19.28■□□□□ 0.68
ZNF440Q8IYI8 ARSA-202ENST00000356098 1895 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
ZNF440Q8IYI8 MGAT3-201ENST00000341184 5062 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
ZNF440Q8IYI8 C7orf25-201ENST00000350427 2451 ntAPPRIS P1 TSL 2 BASIC19.28■□□□□ 0.68
ZNF440Q8IYI8 FBXL19-205ENST00000562319 2462 ntAPPRIS ALT2 TSL 2 BASIC19.28■□□□□ 0.68
ZNF440Q8IYI8 CLDND1-202ENST00000394180 2228 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
ZNF440Q8IYI8 PDE5A-201ENST00000264805 3020 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
ZNF440Q8IYI8 ILKAP-211ENST00000612675 1335 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
ZNF440Q8IYI8 DHRS2-202ENST00000344777 1678 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
ZNF440Q8IYI8 AC138649.1-201ENST00000619611 1449 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
ZNF440Q8IYI8 ASCL2-201ENST00000331289 1852 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
ZNF440Q8IYI8 CLN8-213ENST00000637156 1897 ntAPPRIS P1 TSL 5 BASIC19.27■□□□□ 0.68
ZNF440Q8IYI8 VPS13B-204ENST00000441350 1626 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
ZNF440Q8IYI8 AK1-201ENST00000223836 736 ntTSL 3 BASIC19.27■□□□□ 0.68
ZNF440Q8IYI8 CRB3-202ENST00000356762 733 ntAPPRIS P4 TSL 1 (best) BASIC19.27■□□□□ 0.68
ZNF440Q8IYI8 LRRC3C-201ENST00000377924 891 ntAPPRIS P1 TSL 3 BASIC19.27■□□□□ 0.68
ZNF440Q8IYI8 CDKN2AIPNL-201ENST00000395009 800 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
ZNF440Q8IYI8 AC027612.3-201ENST00000413684 1047 ntBASIC19.27■□□□□ 0.68
ZNF440Q8IYI8 MED14OS-201ENST00000456333 900 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
ZNF440Q8IYI8 PRSS22-203ENST00000571228 1037 ntTSL 2 BASIC19.27■□□□□ 0.68
ZNF440Q8IYI8 AC053503.5-201ENST00000601508 636 ntBASIC19.27■□□□□ 0.68
ZNF440Q8IYI8 ADCK2-201ENST00000072869 2377 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
ZNF440Q8IYI8 BAALC-205ENST00000438105 2662 ntTSL 1 (best) BASIC19.27■□□□□ 0.67
ZNF440Q8IYI8 EPO-201ENST00000252723 1330 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
ZNF440Q8IYI8 MAST2-201ENST00000361297 5738 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
ZNF440Q8IYI8 LINC00682-201ENST00000498940 1625 ntTSL 3 BASIC19.26■□□□□ 0.67
ZNF440Q8IYI8 LINC01140-202ENST00000467438 2375 ntTSL 2 BASIC19.26■□□□□ 0.67
ZNF440Q8IYI8 SEC61A2-205ENST00000379033 2462 ntTSL 2 BASIC19.26■□□□□ 0.67
ZNF440Q8IYI8 GRINA-202ENST00000395068 1814 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
ZNF440Q8IYI8 CROT-202ENST00000412227 1213 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
ZNF440Q8IYI8 CDKN2A-210ENST00000530628 748 ntAPPRIS P1 TSL 5 BASIC19.26■□□□□ 0.67
ZNF440Q8IYI8 MIR6084-201ENST00000622012 110 ntBASIC19.26■□□□□ 0.67
ZNF440Q8IYI8 ALKAL2-204ENST00000403610 1389 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
ZNF440Q8IYI8 GPR35-204ENST00000430267 1399 ntAPPRIS ALT2 TSL 5 BASIC19.26■□□□□ 0.67
ZNF440Q8IYI8 CNNM4-201ENST00000377075 4800 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
ZNF440Q8IYI8 RARG-204ENST00000543726 1779 ntTSL 2 BASIC19.26■□□□□ 0.67
ZNF440Q8IYI8 LYPD1-202ENST00000397463 1891 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
ZNF440Q8IYI8 TMEM125-201ENST00000432792 1850 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
ZNF440Q8IYI8 KIF12-207ENST00000640217 2194 ntAPPRIS P5 TSL 5 BASIC19.26■□□□□ 0.67
ZNF440Q8IYI8 HSF4-215ENST00000521374 1515 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
ZNF440Q8IYI8 NAPEPLD-208ENST00000427257 1822 ntAPPRIS P1 TSL 2 BASIC19.25■□□□□ 0.67
ZNF440Q8IYI8 HUNK-201ENST00000270112 7385 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
ZNF440Q8IYI8 OPN3-201ENST00000366554 2620 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
ZNF440Q8IYI8 MOGS-202ENST00000409065 2668 ntTSL 5 BASIC19.25■□□□□ 0.67
ZNF440Q8IYI8 PALM-208ENST00000592155 2272 ntTSL 4 BASIC19.25■□□□□ 0.67
ZNF440Q8IYI8 ARL6IP4-220ENST00000543566 1591 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
ZNF440Q8IYI8 ADAMTS13-204ENST00000371911 1155 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
ZNF440Q8IYI8 PPCS-202ENST00000372560 793 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
ZNF440Q8IYI8 NMRAL1-202ENST00000404295 1233 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
ZNF440Q8IYI8 SDHAP3-201ENST00000436493 736 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
ZNF440Q8IYI8 SLC39A3-203ENST00000545664 1219 ntTSL 2 BASIC19.25■□□□□ 0.67
ZNF440Q8IYI8 AP003071.3-201ENST00000562506 366 ntTSL 3 BASIC19.25■□□□□ 0.67
ZNF440Q8IYI8 EEF1DP3-203ENST00000566025 782 ntBASIC19.25■□□□□ 0.67
ZNF440Q8IYI8 ELANE-202ENST00000590230 1028 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
ZNF440Q8IYI8 RBAK-202ENST00000396912 6551 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
ZNF440Q8IYI8 PPP3CC-201ENST00000240139 2189 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
ZNF440Q8IYI8 MCAT-201ENST00000290429 2056 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
ZNF440Q8IYI8 ZNF622-201ENST00000308683 1699 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
ZNF440Q8IYI8 LRCH4-209ENST00000497245 2014 ntTSL 5 BASIC19.24■□□□□ 0.67
ZNF440Q8IYI8 TNFAIP8L3-202ENST00000637513 2002 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
ZNF440Q8IYI8 AL024507.2-201ENST00000606070 2574 ntBASIC19.24■□□□□ 0.67
ZNF440Q8IYI8 AC079140.4-201ENST00000507448 529 ntBASIC19.24■□□□□ 0.67
ZNF440Q8IYI8 PPP1R14A-205ENST00000591585 949 ntTSL 2 BASIC19.24■□□□□ 0.67
ZNF440Q8IYI8 RNF114-202ENST00000622920 1284 ntTSL 5 BASIC19.24■□□□□ 0.67
ZNF440Q8IYI8 DDIT4-201ENST00000307365 1748 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
ZNF440Q8IYI8 NOC4L-201ENST00000330579 1632 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
ZNF440Q8IYI8 DACT2-203ENST00000607983 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
ZNF440Q8IYI8 C1QL4-201ENST00000334221 2071 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
ZNF440Q8IYI8 RASGEF1C-201ENST00000361132 2243 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
ZNF440Q8IYI8 RASSF1-203ENST00000359365 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC19.23■□□□□ 0.67
ZNF440Q8IYI8 AL137060.1-201ENST00000618151 2648 ntBASIC19.23■□□□□ 0.67
ZNF440Q8IYI8 MPST-205ENST00000404802 1453 ntAPPRIS P1 TSL 3 BASIC19.23■□□□□ 0.67
ZNF440Q8IYI8 CPNE9-203ENST00000383832 2068 ntAPPRIS P1 TSL 5 BASIC19.23■□□□□ 0.67
ZNF440Q8IYI8 TM7SF2-201ENST00000279263 1722 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
ZNF440Q8IYI8 ZNF664-207ENST00000539644 5108 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
ZNF440Q8IYI8 RPL8-201ENST00000262584 1041 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
ZNF440Q8IYI8 SCN1B-203ENST00000595652 814 ntTSL 2 BASIC19.23■□□□□ 0.67
ZNF440Q8IYI8 VPS29-206ENST00000549578 1523 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
ZNF440Q8IYI8 PDXDC1-205ENST00000535621 2048 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
ZNF440Q8IYI8 DAPK3-202ENST00000545797 2257 ntAPPRIS P1 TSL 2 BASIC19.23■□□□□ 0.67
ZNF440Q8IYI8 PML-217ENST00000567543 1404 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
ZNF440Q8IYI8 FGFR1-214ENST00000447712 5900 ntAPPRIS P3 TSL 1 (best) BASIC19.23■□□□□ 0.67
ZNF440Q8IYI8 RITA1-201ENST00000548278 2053 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 20.2 ms