Protein–RNA interactions for Protein: Q86WR0

CCDC25, Coiled-coil domain-containing protein 25, humanhuman

Predictions only

Length 208 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC25Q86WR0 PCDH8-202ENST00000377942 5088 ntAPPRIS P4 TSL 1 (best) BASIC21.69■■□□□ 1.06
CCDC25Q86WR0 C19orf35-201ENST00000342063 2574 ntAPPRIS P1 TSL 2 BASIC21.69■■□□□ 1.06
CCDC25Q86WR0 AC092667.1-201ENST00000434301 2586 ntBASIC21.69■■□□□ 1.06
CCDC25Q86WR0 POMGNT1-201ENST00000371984 2728 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
CCDC25Q86WR0 SHB-201ENST00000377707 2783 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
CCDC25Q86WR0 TERF1-202ENST00000276603 1677 ntAPPRIS P4 TSL 1 (best) BASIC21.69■■□□□ 1.06
CCDC25Q86WR0 SNX3-201ENST00000230085 1755 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
CCDC25Q86WR0 TBC1D9-201ENST00000442267 5306 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
CCDC25Q86WR0 MYL5-206ENST00000506838 2956 ntTSL 2 BASIC21.69■■□□□ 1.06
CCDC25Q86WR0 WNT10B-202ENST00000403957 1817 ntTSL 5 BASIC21.69■■□□□ 1.06
CCDC25Q86WR0 GLIPR2-203ENST00000396613 1917 ntTSL 4 BASIC21.68■■□□□ 1.06
CCDC25Q86WR0 ZNRF1-202ENST00000335325 4620 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
CCDC25Q86WR0 MYH14-206ENST00000596571 5988 ntAPPRIS ALT2 TSL 5 BASIC21.68■■□□□ 1.06
CCDC25Q86WR0 SOX11-201ENST00000322002 8719 ntAPPRIS P1 BASIC21.68■■□□□ 1.06
CCDC25Q86WR0 PDXDC1-205ENST00000535621 2048 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
CCDC25Q86WR0 DLGAP4-201ENST00000339266 5016 ntAPPRIS ALT2 TSL 5 BASIC21.68■■□□□ 1.06
CCDC25Q86WR0 RPUSD1-202ENST00000561734 2159 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
CCDC25Q86WR0 SHKBP1-225ENST00000600733 2284 ntTSL 5 BASIC21.68■■□□□ 1.06
CCDC25Q86WR0 KCNS3-201ENST00000304101 2333 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
CCDC25Q86WR0 ME3-212ENST00000543262 2311 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
CCDC25Q86WR0 JAKMIP1-201ENST00000282924 2585 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
CCDC25Q86WR0 NRXN1-202ENST00000342183 3315 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
CCDC25Q86WR0 AC009041.2-204ENST00000568394 3343 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
CCDC25Q86WR0 NDUFAF8-201ENST00000431388 615 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
CCDC25Q86WR0 KRT16P3-201ENST00000439127 1283 ntBASIC21.68■■□□□ 1.06
CCDC25Q86WR0 OR2I1P-207ENST00000453522 948 ntBASIC21.68■■□□□ 1.06
CCDC25Q86WR0 AC010525.1-201ENST00000585559 441 ntBASIC21.68■■□□□ 1.06
CCDC25Q86WR0 QPCT-201ENST00000338415 1739 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
CCDC25Q86WR0 AC003102.1-202ENST00000563394 1796 ntBASIC21.68■■□□□ 1.06
CCDC25Q86WR0 CREB3-201ENST00000353704 1832 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
CCDC25Q86WR0 CENPU-201ENST00000281453 1998 ntAPPRIS P2 TSL 1 (best) BASIC21.68■■□□□ 1.06
CCDC25Q86WR0 TUBGCP3-204ENST00000464139 2461 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
CCDC25Q86WR0 PKMYT1-201ENST00000262300 2171 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
CCDC25Q86WR0 FBLN5-202ENST00000342058 2123 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
CCDC25Q86WR0 HMOX1-201ENST00000216117 1822 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
CCDC25Q86WR0 TPM1-204ENST00000334895 1637 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
CCDC25Q86WR0 ZNRF1-205ENST00000566250 1069 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
CCDC25Q86WR0 ZNRF1-206ENST00000567962 1234 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
CCDC25Q86WR0 RAI14-201ENST00000265109 5092 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
CCDC25Q86WR0 LINC01547-202ENST00000397841 2303 ntTSL 2 BASIC21.67■■□□□ 1.06
CCDC25Q86WR0 ADAMTS2-202ENST00000274609 2044 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
CCDC25Q86WR0 TRABD2A-203ENST00000409520 1975 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
CCDC25Q86WR0 GPC1-202ENST00000420138 1835 ntTSL 5 BASIC21.66■■□□□ 1.06
CCDC25Q86WR0 SMPDL3A-203ENST00000539041 1755 ntTSL 2 BASIC21.66■■□□□ 1.06
CCDC25Q86WR0 JDP2-201ENST00000267569 1700 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
CCDC25Q86WR0 B3GALT4-204ENST00000451237 1694 ntAPPRIS P1 BASIC21.66■■□□□ 1.06
CCDC25Q86WR0 TIMM50-201ENST00000314349 1612 ntAPPRIS P2 TSL 1 (best) BASIC21.66■■□□□ 1.06
CCDC25Q86WR0 MYCBPAP-202ENST00000419930 1640 ntAPPRIS ALT2 TSL 1 (best) BASIC21.66■■□□□ 1.06
CCDC25Q86WR0 ROR1-201ENST00000371079 5832 ntAPPRIS P2 TSL 1 (best) BASIC21.66■■□□□ 1.06
CCDC25Q86WR0 PARN-205ENST00000539279 1557 ntTSL 2 BASIC21.66■■□□□ 1.06
CCDC25Q86WR0 ARFRP1-210ENST00000614942 2554 ntTSL 5 BASIC21.66■■□□□ 1.06
CCDC25Q86WR0 AF117829.1-201ENST00000519655 1398 ntTSL 5 BASIC21.66■■□□□ 1.06
CCDC25Q86WR0 TEAD2-208ENST00000598810 2191 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
CCDC25Q86WR0 ACYP2-202ENST00000394666 993 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
CCDC25Q86WR0 AC019163.1-201ENST00000512634 610 ntTSL 2 BASIC21.66■■□□□ 1.06
CCDC25Q86WR0 PALM-207ENST00000590161 2137 ntTSL 4 BASIC21.66■■□□□ 1.06
CCDC25Q86WR0 RHOBTB2-201ENST00000251822 5451 ntAPPRIS P3 TSL 1 (best) BASIC21.66■■□□□ 1.06
CCDC25Q86WR0 NUDT16L1-202ENST00000405142 2040 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
CCDC25Q86WR0 ST3GAL4-209ENST00000526727 1967 ntAPPRIS ALT1 TSL 1 (best) BASIC21.66■■□□□ 1.06
CCDC25Q86WR0 DMRTB1-201ENST00000371445 1910 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
CCDC25Q86WR0 PEX6-201ENST00000244546 2696 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
CCDC25Q86WR0 LYPD1-202ENST00000397463 1891 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
CCDC25Q86WR0 TBC1D2B-202ENST00000409931 6086 ntAPPRIS P3 TSL 1 (best) BASIC21.66■■□□□ 1.06
CCDC25Q86WR0 TMEM17-201ENST00000335390 1797 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
CCDC25Q86WR0 RTP5-201ENST00000343216 2296 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
CCDC25Q86WR0 SUDS3-204ENST00000543473 4897 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
CCDC25Q86WR0 GPRIN2-202ENST00000374317 1966 ntAPPRIS P1 TSL 3 BASIC21.65■■□□□ 1.06
CCDC25Q86WR0 TGFBR1-201ENST00000374990 5720 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
CCDC25Q86WR0 JAKMIP1-203ENST00000409371 2420 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
CCDC25Q86WR0 TMPO-204ENST00000393053 2374 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
CCDC25Q86WR0 FBXO31-201ENST00000311635 5934 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
CCDC25Q86WR0 FOXP1-201ENST00000318779 843 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
CCDC25Q86WR0 CHTF8-205ENST00000519520 856 ntTSL 2 BASIC21.65■■□□□ 1.06
CCDC25Q86WR0 AL117209.1-201ENST00000560931 828 ntTSL 3 BASIC21.65■■□□□ 1.06
CCDC25Q86WR0 SLC35A3-216ENST00000639221 1032 ntTSL 5 BASIC21.65■■□□□ 1.06
CCDC25Q86WR0 ST7L-221ENST00000490067 1780 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
CCDC25Q86WR0 TPBGL-201ENST00000562197 2793 ntAPPRIS P1 BASIC21.65■■□□□ 1.06
CCDC25Q86WR0 BASP1-203ENST00000616743 1711 ntAPPRIS P1 TSL 3 BASIC21.65■■□□□ 1.06
CCDC25Q86WR0 C16orf59-201ENST00000361837 1662 ntAPPRIS P2 TSL 1 (best) BASIC21.65■■□□□ 1.06
CCDC25Q86WR0 AP004607.7-201ENST00000527152 1677 ntBASIC21.65■■□□□ 1.06
CCDC25Q86WR0 PHLDA3-202ENST00000367311 2640 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
CCDC25Q86WR0 OLIG3-201ENST00000367734 2049 ntAPPRIS P1 BASIC21.65■■□□□ 1.06
CCDC25Q86WR0 GATM-206ENST00000558336 1522 ntTSL 2 BASIC21.65■■□□□ 1.06
CCDC25Q86WR0 UBALD1-201ENST00000283474 1413 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
CCDC25Q86WR0 HOMER3-203ENST00000433218 1418 ntAPPRIS ALT1 TSL 5 BASIC21.64■■□□□ 1.06
CCDC25Q86WR0 SOCS7-202ENST00000613678 1827 ntTSL 5 BASIC21.64■■□□□ 1.06
CCDC25Q86WR0 MATN4-204ENST00000372756 2077 ntAPPRIS P2 TSL 1 (best) BASIC21.64■■□□□ 1.05
CCDC25Q86WR0 NEURL1B-203ENST00000522853 1263 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
CCDC25Q86WR0 PRSS21-201ENST00000005995 1101 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
CCDC25Q86WR0 TUBBP5-204ENST00000635438 565 ntTSL 4 BASIC21.64■■□□□ 1.05
CCDC25Q86WR0 YTHDF3-214ENST00000621890 2296 ntTSL 5 BASIC21.64■■□□□ 1.05
CCDC25Q86WR0 FDFT1-210ENST00000525954 1890 ntTSL 2 BASIC21.64■■□□□ 1.05
CCDC25Q86WR0 MFSD3-201ENST00000301327 1548 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
CCDC25Q86WR0 LINC01089-202ENST00000429892 1521 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
CCDC25Q86WR0 WT1-210ENST00000639563 1494 ntAPPRIS ALT2 TSL 1 (best) BASIC21.64■■□□□ 1.05
CCDC25Q86WR0 CAPG-201ENST00000263867 1442 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
CCDC25Q86WR0 ZNF773-204ENST00000598770 2019 ntAPPRIS ALT2 TSL 2 BASIC21.63■■□□□ 1.05
CCDC25Q86WR0 SMUG1-215ENST00000508394 1697 ntAPPRIS P1 TSL 2 BASIC21.63■■□□□ 1.05
CCDC25Q86WR0 LEF1-AS1-207ENST00000512637 1675 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
CCDC25Q86WR0 AC133555.3-201ENST00000549950 1693 ntAPPRIS P5 TSL 5 BASIC21.63■■□□□ 1.05
Retrieved 100 of 98,524 protein–RNA pairs in 36.7 ms