Protein–RNA interactions for Protein: Q6PIV2

FOXR1, Forkhead box protein R1, humanhuman

Predictions only

Length 292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXR1Q6PIV2 SCUBE1-201ENST00000290460 2258 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
FOXR1Q6PIV2 PRPF39-201ENST00000355765 2868 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.08
FOXR1Q6PIV2 HNRNPAB-201ENST00000355836 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC21.83■■□□□ 1.08
FOXR1Q6PIV2 CCDC151-201ENST00000356392 2107 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.08
FOXR1Q6PIV2 DMRT2-205ENST00000382255 2367 ntTSL 1 (best) BASIC21.83■■□□□ 1.08
FOXR1Q6PIV2 GCH1-206ENST00000543643 1897 ntTSL 1 (best) BASIC21.83■■□□□ 1.08
FOXR1Q6PIV2 SAP30L-201ENST00000297109 6226 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.08
FOXR1Q6PIV2 LTBP3-217ENST00000530785 2461 ntTSL 2 BASIC21.83■■□□□ 1.08
FOXR1Q6PIV2 ADORA2B-201ENST00000304222 1735 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.08
FOXR1Q6PIV2 PFKFB4-202ENST00000383734 1491 ntTSL 1 (best) BASIC21.83■■□□□ 1.08
FOXR1Q6PIV2 SEPT5-201ENST00000383045 1588 ntTSL 5 BASIC21.82■■□□□ 1.08
FOXR1Q6PIV2 AL353803.4-201ENST00000565882 1934 ntBASIC21.82■■□□□ 1.08
FOXR1Q6PIV2 NDUFAF3-202ENST00000326925 2012 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
FOXR1Q6PIV2 ZNF213-202ENST00000416391 2996 ntAPPRIS P1 TSL 5 BASIC21.82■■□□□ 1.08
FOXR1Q6PIV2 PTPRM-211ENST00000580170 5941 ntAPPRIS ALT2 TSL 1 (best) BASIC21.82■■□□□ 1.08
FOXR1Q6PIV2 GMDS-202ENST00000380815 1752 ntAPPRIS P3 TSL 1 (best) BASIC21.82■■□□□ 1.08
FOXR1Q6PIV2 CACNB1-201ENST00000344140 1889 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
FOXR1Q6PIV2 AC004707.1-201ENST00000511627 715 ntTSL 3 BASIC21.82■■□□□ 1.08
FOXR1Q6PIV2 AC011298.3-201ENST00000615796 283 ntBASIC21.82■■□□□ 1.08
FOXR1Q6PIV2 AKT2-210ENST00000424901 5170 ntTSL 5 BASIC21.82■■□□□ 1.08
FOXR1Q6PIV2 PLPP2-202ENST00000327790 1397 ntTSL 5 BASIC21.82■■□□□ 1.08
FOXR1Q6PIV2 PRKAR1B-212ENST00000544935 2494 ntAPPRIS P1 TSL 5 BASIC21.82■■□□□ 1.08
FOXR1Q6PIV2 TLK2-202ENST00000343388 3227 ntAPPRIS ALT1 TSL 1 (best) BASIC21.82■■□□□ 1.08
FOXR1Q6PIV2 ARFRP1-208ENST00000612256 2974 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
FOXR1Q6PIV2 AC004691.2-201ENST00000509504 1531 ntAPPRIS P1 TSL 5 BASIC21.81■■□□□ 1.08
FOXR1Q6PIV2 SLC25A1-201ENST00000215882 1648 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
FOXR1Q6PIV2 MBD3-207ENST00000590550 2782 ntTSL 2 BASIC21.81■■□□□ 1.08
FOXR1Q6PIV2 ORAI3-202ENST00000562699 628 ntTSL 2 BASIC21.81■■□□□ 1.08
FOXR1Q6PIV2 AC091982.4-201ENST00000623943 726 ntTSL 2 BASIC21.81■■□□□ 1.08
FOXR1Q6PIV2 LRRC75A-203ENST00000470794 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC21.81■■□□□ 1.08
FOXR1Q6PIV2 CCDC24-201ENST00000372318 1463 ntAPPRIS P2 TSL 1 (best) BASIC21.81■■□□□ 1.08
FOXR1Q6PIV2 PDIA2-201ENST00000219406 1698 ntAPPRIS P2 TSL 1 (best) BASIC21.81■■□□□ 1.08
FOXR1Q6PIV2 PDCD2-204ENST00000453163 2657 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
FOXR1Q6PIV2 ZNF503-AS2-202ENST00000466942 1430 ntTSL 2 BASIC21.8■■□□□ 1.08
FOXR1Q6PIV2 C7orf25-203ENST00000431882 1645 ntTSL 2 BASIC21.8■■□□□ 1.08
FOXR1Q6PIV2 AL022069.1-201ENST00000568025 1636 ntBASIC21.8■■□□□ 1.08
FOXR1Q6PIV2 KCNMA1-209ENST00000372443 5059 ntAPPRIS ALT2 TSL 5 BASIC21.8■■□□□ 1.08
FOXR1Q6PIV2 BICDL2-201ENST00000389347 1811 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
FOXR1Q6PIV2 MVB12A-201ENST00000317040 2223 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
FOXR1Q6PIV2 ZBTB33-202ENST00000557385 2346 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
FOXR1Q6PIV2 NTNG2-202ENST00000393229 4792 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
FOXR1Q6PIV2 STXBP6-203ENST00000419632 1970 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
FOXR1Q6PIV2 SRM-201ENST00000376957 1266 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
FOXR1Q6PIV2 CEP104-201ENST00000378223 1121 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
FOXR1Q6PIV2 HES6-206ENST00000409574 738 ntTSL 2 BASIC21.8■■□□□ 1.08
FOXR1Q6PIV2 CREB3L2-203ENST00000452463 1105 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
FOXR1Q6PIV2 ACAP1-206ENST00000571471 320 ntTSL 2 BASIC21.8■■□□□ 1.08
FOXR1Q6PIV2 LEFTY1-201ENST00000272134 1626 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
FOXR1Q6PIV2 WTAP-201ENST00000337387 1622 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
FOXR1Q6PIV2 ZC3H14-219ENST00000556945 2075 ntTSL 5 BASIC21.79■■□□□ 1.08
FOXR1Q6PIV2 KREMEN2-203ENST00000571007 1877 ntTSL 2 BASIC21.79■■□□□ 1.08
FOXR1Q6PIV2 GTF3C5-202ENST00000372097 2406 ntAPPRIS P3 TSL 1 (best) BASIC21.79■■□□□ 1.08
FOXR1Q6PIV2 SMURF1-201ENST00000361125 5737 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
FOXR1Q6PIV2 SYNC-201ENST00000373484 1824 ntAPPRIS ALT2 TSL 2 BASIC21.79■■□□□ 1.08
FOXR1Q6PIV2 PLPP5-201ENST00000419686 794 ntTSL 2 BASIC21.79■■□□□ 1.08
FOXR1Q6PIV2 AL138724.1-201ENST00000606771 1088 ntBASIC21.79■■□□□ 1.08
FOXR1Q6PIV2 CDKN2C-203ENST00000396148 2086 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
FOXR1Q6PIV2 FDXR-201ENST00000293195 1875 ntAPPRIS ALT1 TSL 1 (best) BASIC21.79■■□□□ 1.08
FOXR1Q6PIV2 SUSD1-204ENST00000374270 3124 ntAPPRIS P3 TSL 1 (best) BASIC21.79■■□□□ 1.08
FOXR1Q6PIV2 NRXN2-204ENST00000377559 6413 ntAPPRIS ALT2 TSL 1 (best) BASIC21.79■■□□□ 1.08
FOXR1Q6PIV2 CPEB1-AS1-201ENST00000560650 2138 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
FOXR1Q6PIV2 MSLN-205ENST00000563941 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC21.79■■□□□ 1.08
FOXR1Q6PIV2 ARPC5L-201ENST00000259477 1325 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
FOXR1Q6PIV2 AC008105.1-201ENST00000587534 2003 ntTSL 2 BASIC21.79■■□□□ 1.08
FOXR1Q6PIV2 AL591684.2-201ENST00000605970 1594 ntTSL 5 BASIC21.78■■□□□ 1.08
FOXR1Q6PIV2 BRD9-202ENST00000467963 2156 ntAPPRIS P1 TSL 2 BASIC21.78■■□□□ 1.08
FOXR1Q6PIV2 BX088645.1-201ENST00000636699 1728 ntAPPRIS P1 TSL 5 BASIC21.78■■□□□ 1.08
FOXR1Q6PIV2 ARNTL-203ENST00000403290 2746 ntAPPRIS ALT1 TSL 1 (best) BASIC21.78■■□□□ 1.08
FOXR1Q6PIV2 NDUFB2-201ENST00000247866 504 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
FOXR1Q6PIV2 CYC1-201ENST00000318911 1240 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
FOXR1Q6PIV2 AC006455.2-201ENST00000429931 906 ntBASIC21.78■■□□□ 1.08
FOXR1Q6PIV2 SIRT3-215ENST00000532956 1235 ntTSL 2 BASIC21.78■■□□□ 1.08
FOXR1Q6PIV2 RHOF-204ENST00000537265 699 ntTSL 2 BASIC21.78■■□□□ 1.08
FOXR1Q6PIV2 AC104564.5-201ENST00000584986 278 ntTSL 3 BASIC21.78■■□□□ 1.08
FOXR1Q6PIV2 POLE2-202ENST00000539565 1792 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
FOXR1Q6PIV2 POTEC-204ENST00000620346 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC21.78■■□□□ 1.08
FOXR1Q6PIV2 C14orf80-206ENST00000392527 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC21.77■■□□□ 1.08
FOXR1Q6PIV2 WISP2-203ENST00000372868 1600 ntAPPRIS P1 TSL 3 BASIC21.77■■□□□ 1.08
FOXR1Q6PIV2 UTS2R-201ENST00000313135 1357 ntAPPRIS P1 BASIC21.77■■□□□ 1.08
FOXR1Q6PIV2 CYB561-213ENST00000581573 2344 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
FOXR1Q6PIV2 STOX1-202ENST00000399162 935 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
FOXR1Q6PIV2 STOX1-203ENST00000399165 1135 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
FOXR1Q6PIV2 GRAMD4P2-201ENST00000423297 1097 ntBASIC21.77■■□□□ 1.08
FOXR1Q6PIV2 UBFD1-208ENST00000567264 642 ntAPPRIS ALT2 TSL 5 BASIC21.77■■□□□ 1.08
FOXR1Q6PIV2 MYDGF-203ENST00000599630 713 ntTSL 2 BASIC21.77■■□□□ 1.08
FOXR1Q6PIV2 TRADD-202ENST00000486556 1833 ntTSL 2 BASIC21.77■■□□□ 1.08
FOXR1Q6PIV2 ANKRD24-201ENST00000262970 3711 ntAPPRIS ALT2 TSL 5 BASIC21.77■■□□□ 1.08
FOXR1Q6PIV2 MDFI-203ENST00000373051 1622 ntAPPRIS P1 TSL 5 BASIC21.77■■□□□ 1.07
FOXR1Q6PIV2 ANKRD28-201ENST00000399451 6564 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.07
FOXR1Q6PIV2 GJC2-201ENST00000366714 2243 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
FOXR1Q6PIV2 RGS11-204ENST00000397770 2390 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
FOXR1Q6PIV2 TOP1MT-201ENST00000329245 1958 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
FOXR1Q6PIV2 TARBP2-201ENST00000266987 1867 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
FOXR1Q6PIV2 ADAMTS2-202ENST00000274609 2044 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
FOXR1Q6PIV2 JTB-203ENST00000368589 1216 ntTSL 2 BASIC21.76■■□□□ 1.07
FOXR1Q6PIV2 DALRD3-206ENST00000441576 1706 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
FOXR1Q6PIV2 SLC39A3-203ENST00000545664 1219 ntTSL 2 BASIC21.76■■□□□ 1.07
FOXR1Q6PIV2 TTYH1-203ENST00000376531 1763 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
FOXR1Q6PIV2 FGFR2-204ENST00000356226 3547 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
FOXR1Q6PIV2 STMN3-201ENST00000370053 2255 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Retrieved 100 of 98,524 protein–RNA pairs in 20.5 ms