Protein–RNA interactions for Protein: Q6PI97

C11orf88, UPF0722 protein C11orf88, humanhuman

Predictions only

Length 169 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf88Q6PI97 THOP1-201ENST00000307741 4804 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
C11orf88Q6PI97 PGRMC2-201ENST00000296425 2767 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
C11orf88Q6PI97 TMEM179-204ENST00000556573 1430 ntAPPRIS P1 TSL 3 BASIC18.23■□□□□ 0.51
C11orf88Q6PI97 HSF4-225ENST00000584272 1549 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
C11orf88Q6PI97 AGAP2-201ENST00000257897 5388 ntAPPRIS P3 TSL 1 (best) BASIC18.23■□□□□ 0.51
C11orf88Q6PI97 CYP2A7-201ENST00000291764 2128 ntTSL 5 BASIC18.23■□□□□ 0.51
C11orf88Q6PI97 ASPM-201ENST00000294732 6132 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
C11orf88Q6PI97 TDRP-202ENST00000427263 2465 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
C11orf88Q6PI97 PMPCA-203ENST00000399219 1987 ntTSL 2 BASIC18.23■□□□□ 0.51
C11orf88Q6PI97 RAB11FIP5-201ENST00000258098 4342 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
C11orf88Q6PI97 FAM173A-201ENST00000219535 806 ntAPPRIS ALT2 TSL 2 BASIC18.23■□□□□ 0.51
C11orf88Q6PI97 NCAN-201ENST00000252575 6387 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
C11orf88Q6PI97 SURF2-201ENST00000371964 842 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
C11orf88Q6PI97 ERRFI1-204ENST00000474874 479 ntTSL 3 BASIC18.23■□□□□ 0.51
C11orf88Q6PI97 SSR2-210ENST00000480567 895 ntAPPRIS P1 TSL 2 BASIC18.23■□□□□ 0.51
C11orf88Q6PI97 INSM1-201ENST00000310227 2829 ntAPPRIS P1 BASIC18.23■□□□□ 0.51
C11orf88Q6PI97 ATOH8-201ENST00000306279 2438 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
C11orf88Q6PI97 ZIM2-206ENST00000599935 2226 ntAPPRIS P1 TSL 5 BASIC18.23■□□□□ 0.51
C11orf88Q6PI97 GATA5-201ENST00000252997 2595 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
C11orf88Q6PI97 C1orf35-201ENST00000272139 1427 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
C11orf88Q6PI97 DNAJC25-GNG10-201ENST00000374294 1448 ntAPPRIS P1 TSL 2 BASIC18.23■□□□□ 0.51
C11orf88Q6PI97 SESN3-202ENST00000416495 1408 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
C11orf88Q6PI97 ZC3H14-219ENST00000556945 2075 ntTSL 5 BASIC18.22■□□□□ 0.51
C11orf88Q6PI97 KLC2-207ENST00000421552 2721 ntTSL 5 BASIC18.22■□□□□ 0.51
C11orf88Q6PI97 ALG1-201ENST00000262374 2132 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
C11orf88Q6PI97 AC007952.6-201ENST00000573168 2673 ntBASIC18.22■□□□□ 0.51
C11orf88Q6PI97 AC003957.1-201ENST00000625108 2673 ntBASIC18.22■□□□□ 0.51
C11orf88Q6PI97 RAP1B-204ENST00000393436 2049 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
C11orf88Q6PI97 ASCL5-201ENST00000449188 2026 ntAPPRIS P1 TSL 3 BASIC18.22■□□□□ 0.51
C11orf88Q6PI97 OSR1-201ENST00000272223 1936 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
C11orf88Q6PI97 NKX6-3-201ENST00000518699 1352 ntAPPRIS P1 TSL 5 BASIC18.22■□□□□ 0.51
C11orf88Q6PI97 HMOX1-201ENST00000216117 1822 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
C11orf88Q6PI97 TRADD-202ENST00000486556 1833 ntTSL 2 BASIC18.22■□□□□ 0.51
C11orf88Q6PI97 STMN4-201ENST00000265770 1250 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
C11orf88Q6PI97 CDKN2A-208ENST00000498124 880 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
C11orf88Q6PI97 MIR4466-201ENST00000606121 54 ntBASIC18.22■□□□□ 0.51
C11orf88Q6PI97 LY6H-205ENST00000615409 980 ntAPPRIS P3 TSL 1 (best) BASIC18.22■□□□□ 0.51
C11orf88Q6PI97 TMEM129-206ENST00000536901 2172 ntAPPRIS P1 TSL 5 BASIC18.22■□□□□ 0.51
C11orf88Q6PI97 TNPO2-203ENST00000450764 4993 ntAPPRIS ALT1 TSL 1 (best) BASIC18.22■□□□□ 0.51
C11orf88Q6PI97 AC144652.1-201ENST00000609974 1624 ntBASIC18.22■□□□□ 0.51
C11orf88Q6PI97 PLEKHO1-201ENST00000369124 2050 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
C11orf88Q6PI97 AC138028.2-201ENST00000440406 1539 ntTSL 2 BASIC18.22■□□□□ 0.51
C11orf88Q6PI97 AF106564.1-201ENST00000607058 2553 ntBASIC18.22■□□□□ 0.51
C11orf88Q6PI97 INTS11-208ENST00000435064 2148 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
C11orf88Q6PI97 HCN2-201ENST00000251287 3408 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
C11orf88Q6PI97 TBC1D22A-206ENST00000407381 1949 ntTSL 5 BASIC18.21■□□□□ 0.51
C11orf88Q6PI97 JAG1-201ENST00000254958 6048 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
C11orf88Q6PI97 ATP10A-201ENST00000356865 6680 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
C11orf88Q6PI97 SNX27-203ENST00000368843 7197 ntAPPRIS P3 TSL 1 (best) BASIC18.21■□□□□ 0.51
C11orf88Q6PI97 DMRT2-203ENST00000358146 1965 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
C11orf88Q6PI97 DISC1-205ENST00000366636 2224 ntAPPRIS P4 TSL 1 (best) BASIC18.21■□□□□ 0.51
C11orf88Q6PI97 AC096631.2-201ENST00000436136 790 ntBASIC18.21■□□□□ 0.51
C11orf88Q6PI97 AC079305.3-201ENST00000455416 218 ntTSL 5 BASIC18.21■□□□□ 0.51
C11orf88Q6PI97 ZNF584-205ENST00000596281 575 ntTSL 2 BASIC18.21■□□□□ 0.51
C11orf88Q6PI97 MAP4K4-202ENST00000324219 7526 ntTSL 5 BASIC18.21■□□□□ 0.51
C11orf88Q6PI97 SPNS2-201ENST00000329078 3447 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
C11orf88Q6PI97 BICDL2-201ENST00000389347 1811 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
C11orf88Q6PI97 C6orf89-201ENST00000355190 1309 ntAPPRIS P3 TSL 1 (best) BASIC18.21■□□□□ 0.51
C11orf88Q6PI97 IRF3-207ENST00000593922 1494 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
C11orf88Q6PI97 KREMEN2-203ENST00000571007 1877 ntTSL 2 BASIC18.2■□□□□ 0.5
C11orf88Q6PI97 HGH1-201ENST00000347708 2531 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
C11orf88Q6PI97 RBM42-203ENST00000588161 1609 ntAPPRIS ALT1 TSL 1 (best) BASIC18.2■□□□□ 0.5
C11orf88Q6PI97 PGAM5-203ENST00000498926 2834 ntAPPRIS P1 TSL 2 BASIC18.2■□□□□ 0.5
C11orf88Q6PI97 ZNF579-201ENST00000325421 2899 ntAPPRIS P1 TSL 2 BASIC18.2■□□□□ 0.5
C11orf88Q6PI97 CHTF8-208ENST00000522091 863 ntTSL 2 BASIC18.2■□□□□ 0.5
C11orf88Q6PI97 TMEM218-209ENST00000529583 848 ntAPPRIS P1 TSL 3 BASIC18.2■□□□□ 0.5
C11orf88Q6PI97 ZNRF1-205ENST00000566250 1069 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
C11orf88Q6PI97 ZNRF1-206ENST00000567962 1234 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
C11orf88Q6PI97 AC110285.6-201ENST00000617652 491 ntBASIC18.2■□□□□ 0.5
C11orf88Q6PI97 HPS6-201ENST00000299238 2649 ntAPPRIS P1 BASIC18.2■□□□□ 0.5
C11orf88Q6PI97 AC090360.1-201ENST00000569722 2218 ntAPPRIS ALT2 TSL 2 BASIC18.2■□□□□ 0.5
C11orf88Q6PI97 ZNF668-207ENST00000535577 2396 ntAPPRIS P1 TSL 5 BASIC18.2■□□□□ 0.5
C11orf88Q6PI97 PLCH2-205ENST00000449969 5450 ntTSL 5 BASIC18.2■□□□□ 0.5
C11orf88Q6PI97 PPP2R5E-204ENST00000555899 2164 ntAPPRIS ALT1 TSL 1 (best) BASIC18.2■□□□□ 0.5
C11orf88Q6PI97 POMT2-201ENST00000261534 4876 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
C11orf88Q6PI97 CDC20-202ENST00000372462 1777 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
C11orf88Q6PI97 REST-206ENST00000612429 1376 ntTSL 5 BASIC18.19■□□□□ 0.5
C11orf88Q6PI97 REST-207ENST00000616975 1370 ntTSL 5 BASIC18.19■□□□□ 0.5
C11orf88Q6PI97 REST-212ENST00000640343 1352 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
C11orf88Q6PI97 AC012645.1-201ENST00000515455 1650 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
C11orf88Q6PI97 AC092384.1-201ENST00000378347 1812 ntTSL 2 BASIC18.19■□□□□ 0.5
C11orf88Q6PI97 TMEM206-205ENST00000535273 2119 ntTSL 2 BASIC18.19■□□□□ 0.5
C11orf88Q6PI97 Z98882.1-201ENST00000622160 2253 ntBASIC18.19■□□□□ 0.5
C11orf88Q6PI97 FNBP1-202ENST00000420781 5410 ntAPPRIS ALT1 TSL 1 (best) BASIC18.19■□□□□ 0.5
C11orf88Q6PI97 TBL1Y-201ENST00000346432 2312 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
C11orf88Q6PI97 SEPT5-201ENST00000383045 1588 ntTSL 5 BASIC18.19■□□□□ 0.5
C11orf88Q6PI97 SIGLEC15-201ENST00000389474 1573 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
C11orf88Q6PI97 KRTAP5-4-201ENST00000399682 1181 ntAPPRIS P5 BASIC18.19■□□□□ 0.5
C11orf88Q6PI97 SDSL-202ENST00000403593 1449 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
C11orf88Q6PI97 SRD5A1P1-201ENST00000442297 786 ntBASIC18.19■□□□□ 0.5
C11orf88Q6PI97 LRRC34-201ENST00000446859 1718 ntAPPRIS ALT2 TSL 2 BASIC18.19■□□□□ 0.5
C11orf88Q6PI97 SERTAD4-AS1-202ENST00000475406 591 ntTSL 2 BASIC18.19■□□□□ 0.5
C11orf88Q6PI97 QDPR-206ENST00000508623 601 ntTSL 3 BASIC18.19■□□□□ 0.5
C11orf88Q6PI97 CALM1-203ENST00000544280 1064 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
C11orf88Q6PI97 BID-215ENST00000622694 2199 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
C11orf88Q6PI97 CDK5-204ENST00000485972 1758 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
C11orf88Q6PI97 CREB3L3-205ENST00000602257 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
C11orf88Q6PI97 AC005703.6-201ENST00000623265 1329 ntBASIC18.19■□□□□ 0.5
C11orf88Q6PI97 E4F1-201ENST00000301727 2573 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
C11orf88Q6PI97 ITGB1BP1-202ENST00000355346 1963 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 18.9 ms