Protein–RNA interactions for Protein: Q6ICC9

RTL6, Retrotransposon Gag-like protein 6, humanhuman

Predictions only

Length 239 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTL6Q6ICC9 SMCO4-201ENST00000298966 1104 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
RTL6Q6ICC9 MDK-204ENST00000395569 686 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
RTL6Q6ICC9 ARL6IP4-205ENST00000412505 818 ntTSL 5 BASIC19.01■□□□□ 0.63
RTL6Q6ICC9 CALM1-202ENST00000447653 1104 ntAPPRIS ALT1 TSL 2 BASIC19.01■□□□□ 0.63
RTL6Q6ICC9 MAGI2-AS3-209ENST00000448195 774 ntTSL 3 BASIC19.01■□□□□ 0.63
RTL6Q6ICC9 ZPBP-201ENST00000046087 1213 ntAPPRIS P3 TSL 1 (best) BASIC19.01■□□□□ 0.63
RTL6Q6ICC9 Z97653.1-201ENST00000567096 446 ntTSL 3 BASIC19.01■□□□□ 0.63
RTL6Q6ICC9 LITAF-205ENST00000570904 1118 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
RTL6Q6ICC9 AC027307.1-201ENST00000590252 457 ntTSL 5 BASIC19.01■□□□□ 0.63
RTL6Q6ICC9 CSNK1G3-206ENST00000511130 1356 ntTSL 2 BASIC19.01■□□□□ 0.63
RTL6Q6ICC9 NEK6-214ENST00000545174 2573 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
RTL6Q6ICC9 STX5-201ENST00000294179 1794 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
RTL6Q6ICC9 PACRGL-227ENST00000513459 1773 ntTSL 5 BASIC19.01■□□□□ 0.63
RTL6Q6ICC9 TOX2-201ENST00000341197 1880 ntAPPRIS P1 TSL 2 BASIC19.01■□□□□ 0.63
RTL6Q6ICC9 EDC4-201ENST00000358933 4800 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
RTL6Q6ICC9 HTRA2-201ENST00000258080 2370 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
RTL6Q6ICC9 FAM83D-202ENST00000619850 2361 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
RTL6Q6ICC9 NHLH1-201ENST00000302101 2563 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
RTL6Q6ICC9 PTPN13-205ENST00000502971 1708 ntTSL 1 (best) BASIC19■□□□□ 0.63
RTL6Q6ICC9 CEACAM4-201ENST00000221954 1205 ntAPPRIS P2 TSL 1 (best) BASIC19■□□□□ 0.63
RTL6Q6ICC9 TMPO-201ENST00000261210 820 ntTSL 1 (best) BASIC19■□□□□ 0.63
RTL6Q6ICC9 METTL15-202ENST00000403099 795 ntTSL 5 BASIC19■□□□□ 0.63
RTL6Q6ICC9 LINC01816-201ENST00000414141 662 ntTSL 1 (best) BASIC19■□□□□ 0.63
RTL6Q6ICC9 GUSBP6-202ENST00000438529 1198 ntBASIC19■□□□□ 0.63
RTL6Q6ICC9 HMX1-202ENST00000506970 651 ntTSL 1 (best) BASIC19■□□□□ 0.63
RTL6Q6ICC9 TSPAN11-202ENST00000535215 988 ntTSL 2 BASIC19■□□□□ 0.63
RTL6Q6ICC9 SLC7A5P2-201ENST00000553010 536 ntBASIC19■□□□□ 0.63
RTL6Q6ICC9 ASPSCR1-211ENST00000581647 720 ntTSL 2 BASIC19■□□□□ 0.63
RTL6Q6ICC9 CEACAM4-203ENST00000600925 899 ntAPPRIS ALT2 TSL 2 BASIC19■□□□□ 0.63
RTL6Q6ICC9 AC010536.3-201ENST00000620306 533 ntBASIC19■□□□□ 0.63
RTL6Q6ICC9 CD99-212ENST00000624481 1089 ntAPPRIS ALT2 TSL 2 BASIC19■□□□□ 0.63
RTL6Q6ICC9 VIL1-204ENST00000440053 1454 ntTSL 1 (best) BASIC19■□□□□ 0.63
RTL6Q6ICC9 GPR143-203ENST00000467482 1762 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
RTL6Q6ICC9 KCTD13-202ENST00000561540 1773 ntTSL 1 (best) BASIC19■□□□□ 0.63
RTL6Q6ICC9 SLC25A11-201ENST00000225665 1897 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
RTL6Q6ICC9 SEPT5-210ENST00000455784 2070 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
RTL6Q6ICC9 MCMBP-202ENST00000369077 2465 ntAPPRIS ALT1 TSL 1 (best) BASIC19■□□□□ 0.63
RTL6Q6ICC9 KCNK12-201ENST00000327876 6227 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
RTL6Q6ICC9 ANKHD1-204ENST00000394722 2035 ntTSL 1 (best) BASIC19■□□□□ 0.63
RTL6Q6ICC9 OSR2-210ENST00000523368 1519 ntTSL 1 (best) BASIC19■□□□□ 0.63
RTL6Q6ICC9 VPS29-206ENST00000549578 1523 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
RTL6Q6ICC9 DLL3-202ENST00000356433 2055 ntAPPRIS P1 TSL 2 BASIC18.99■□□□□ 0.63
RTL6Q6ICC9 SNRK-203ENST00000437827 1995 ntTSL 2 BASIC18.99■□□□□ 0.63
RTL6Q6ICC9 SOX18-201ENST00000340356 1864 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
RTL6Q6ICC9 MRPL37-206ENST00000605337 1582 ntTSL 5 BASIC18.99■□□□□ 0.63
RTL6Q6ICC9 PNLIPRP2-204ENST00000591655 1456 ntAPPRIS ALT1 TSL 5 BASIC18.99■□□□□ 0.63
RTL6Q6ICC9 IDI1-201ENST00000381344 2301 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
RTL6Q6ICC9 AQP6-201ENST00000315520 1398 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
RTL6Q6ICC9 NAA20-201ENST00000310450 920 ntTSL 2 BASIC18.99■□□□□ 0.63
RTL6Q6ICC9 HAGH-201ENST00000397353 1257 ntAPPRIS ALT1 TSL 5 BASIC18.99■□□□□ 0.63
RTL6Q6ICC9 EIF5A-205ENST00000419711 1271 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
RTL6Q6ICC9 ARL5A-202ENST00000428992 747 ntTSL 2 BASIC18.99■□□□□ 0.63
RTL6Q6ICC9 TSPY6P-201ENST00000448518 926 ntBASIC18.99■□□□□ 0.63
RTL6Q6ICC9 AC142086.2-201ENST00000569753 217 ntBASIC18.99■□□□□ 0.63
RTL6Q6ICC9 NDUFV2-AS1-201ENST00000582375 770 ntTSL 2 BASIC18.99■□□□□ 0.63
RTL6Q6ICC9 AC053503.5-201ENST00000601508 636 ntBASIC18.99■□□□□ 0.63
RTL6Q6ICC9 MMP25-204ENST00000612971 1017 ntTSL 5 BASIC18.99■□□□□ 0.63
RTL6Q6ICC9 COG8-201ENST00000562081 1731 ntAPPRIS P1 TSL 5 BASIC18.99■□□□□ 0.63
RTL6Q6ICC9 DENND1A-201ENST00000373618 3003 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
RTL6Q6ICC9 GPSM1-204ENST00000429455 2057 ntTSL 3 BASIC18.99■□□□□ 0.63
RTL6Q6ICC9 KRT7-201ENST00000331817 1754 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
RTL6Q6ICC9 RYK-208ENST00000620660 2942 ntAPPRIS P3 TSL 1 (best) BASIC18.98■□□□□ 0.63
RTL6Q6ICC9 GPR6-202ENST00000414000 1945 ntTSL 2 BASIC18.98■□□□□ 0.63
RTL6Q6ICC9 CIDEB-201ENST00000258807 2294 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
RTL6Q6ICC9 TMEM235-205ENST00000586400 2272 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
RTL6Q6ICC9 KCNH6-203ENST00000580652 1703 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
RTL6Q6ICC9 SCRT2-201ENST00000246104 3577 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
RTL6Q6ICC9 DTYMK-201ENST00000305784 1232 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
RTL6Q6ICC9 FDX2-202ENST00000393708 1012 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
RTL6Q6ICC9 YBEY-204ENST00000397692 433 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
RTL6Q6ICC9 UQCRFS1P1-201ENST00000435169 820 ntBASIC18.98■□□□□ 0.63
RTL6Q6ICC9 PDXDC2P-202ENST00000527016 543 ntTSL 3 BASIC18.98■□□□□ 0.63
RTL6Q6ICC9 OAS3-207ENST00000551007 998 ntTSL 2 BASIC18.98■□□□□ 0.63
RTL6Q6ICC9 F2RL3-202ENST00000599210 613 ntTSL 2 BASIC18.98■□□□□ 0.63
RTL6Q6ICC9 RBPJL-202ENST00000372741 1636 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
RTL6Q6ICC9 LTBP3-201ENST00000301873 4443 ntAPPRIS ALT2 TSL 2 BASIC18.98■□□□□ 0.63
RTL6Q6ICC9 LYPLA1-201ENST00000316963 2585 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
RTL6Q6ICC9 COMT-203ENST00000403184 2217 ntTSL 2 BASIC18.98■□□□□ 0.63
RTL6Q6ICC9 CACNG2-201ENST00000300105 2384 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
RTL6Q6ICC9 LRIG1-201ENST00000273261 5273 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
RTL6Q6ICC9 CD6-203ENST00000352009 1809 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
RTL6Q6ICC9 SOCS7-202ENST00000613678 1827 ntTSL 5 BASIC18.97■□□□□ 0.63
RTL6Q6ICC9 ASB6-201ENST00000277458 2330 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
RTL6Q6ICC9 AVPI1-201ENST00000370626 1457 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
RTL6Q6ICC9 GGA2-211ENST00000567468 1713 ntTSL 2 BASIC18.97■□□□□ 0.63
RTL6Q6ICC9 ZFP69B-204ENST00000484445 1976 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
RTL6Q6ICC9 IER5L-201ENST00000372491 2711 ntAPPRIS P1 BASIC18.97■□□□□ 0.63
RTL6Q6ICC9 GALNT8-202ENST00000433855 5977 ntTSL 2 BASIC18.97■□□□□ 0.63
RTL6Q6ICC9 B3GALT6-201ENST00000379198 2777 ntAPPRIS P1 BASIC18.97■□□□□ 0.63
RTL6Q6ICC9 NPAS1-202ENST00000449844 2043 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
RTL6Q6ICC9 AC138028.2-201ENST00000440406 1539 ntTSL 2 BASIC18.97■□□□□ 0.63
RTL6Q6ICC9 HSF4-215ENST00000521374 1515 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
RTL6Q6ICC9 FAM207A-201ENST00000291634 927 ntAPPRIS P3 TSL 1 (best) BASIC18.97■□□□□ 0.63
RTL6Q6ICC9 MRPL39-201ENST00000307301 1199 ntAPPRIS ALT2 TSL 5 BASIC18.97■□□□□ 0.63
RTL6Q6ICC9 MRPL39-202ENST00000352957 1110 ntAPPRIS P3 TSL 1 (best) BASIC18.97■□□□□ 0.63
RTL6Q6ICC9 CD8B-205ENST00000393761 932 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
RTL6Q6ICC9 JDP2-202ENST00000419727 972 ntAPPRIS P1 TSL 2 BASIC18.97■□□□□ 0.63
RTL6Q6ICC9 CD8B-206ENST00000431506 692 ntAPPRIS ALT2 TSL 5 BASIC18.97■□□□□ 0.63
RTL6Q6ICC9 CAMTA1-216ENST00000557126 486 ntTSL 2 BASIC18.97■□□□□ 0.63
RTL6Q6ICC9 AP005205.2-201ENST00000577327 491 ntTSL 2 BASIC18.97■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 20.1 ms