Protein–RNA interactions for Protein: Q53EL6

PDCD4, Programmed cell death protein 4, humanhuman

Known RBP Predictions only

Length 469 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDCD4Q53EL6 AC011298.3-201ENST00000615796 283 ntBASIC20.22■□□□□ 0.83
PDCD4Q53EL6 CD55-205ENST00000367067 1843 ntAPPRIS ALT2 TSL 5 BASIC20.22■□□□□ 0.83
PDCD4Q53EL6 CDK13-207ENST00000613626 3099 ntTSL 5 BASIC20.22■□□□□ 0.83
PDCD4Q53EL6 ZNF821-202ENST00000425432 2000 ntAPPRIS P1 TSL 5 BASIC20.22■□□□□ 0.83
PDCD4Q53EL6 CXCL16-203ENST00000574412 1668 ntAPPRIS P2 TSL 1 (best) BASIC20.22■□□□□ 0.83
PDCD4Q53EL6 NEK3-208ENST00000618534 2414 ntAPPRIS P2 TSL 5 BASIC20.22■□□□□ 0.83
PDCD4Q53EL6 ENKD1-206ENST00000602644 1353 ntTSL 5 BASIC20.21■□□□□ 0.83
PDCD4Q53EL6 AC007952.6-201ENST00000573168 2673 ntBASIC20.21■□□□□ 0.83
PDCD4Q53EL6 AC003957.1-201ENST00000625108 2673 ntBASIC20.21■□□□□ 0.83
PDCD4Q53EL6 TBL1Y-201ENST00000346432 2312 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
PDCD4Q53EL6 TMEM98-206ENST00000579849 4434 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
PDCD4Q53EL6 AR-209ENST00000613054 3532 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
PDCD4Q53EL6 RLBP1-201ENST00000268125 1810 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
PDCD4Q53EL6 ADAMTS2-202ENST00000274609 2044 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
PDCD4Q53EL6 GJC2-201ENST00000366714 2243 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
PDCD4Q53EL6 P2RX2-205ENST00000352418 1200 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
PDCD4Q53EL6 YJEFN3-201ENST00000436027 878 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
PDCD4Q53EL6 FAM228B-208ENST00000613899 1238 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
PDCD4Q53EL6 GNB1L-202ENST00000403325 1699 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
PDCD4Q53EL6 LINC01006-201ENST00000333319 2292 ntBASIC20.21■□□□□ 0.83
PDCD4Q53EL6 POFUT1-201ENST00000375730 1507 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
PDCD4Q53EL6 ACP4-201ENST00000270593 1347 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
PDCD4Q53EL6 PPP1R3F-201ENST00000055335 3421 ntAPPRIS P1 TSL 2 BASIC20.21■□□□□ 0.83
PDCD4Q53EL6 NDUFAF6-203ENST00000396124 1798 ntAPPRIS P1 TSL 2 BASIC20.21■□□□□ 0.83
PDCD4Q53EL6 UPF1-207ENST00000599848 5311 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
PDCD4Q53EL6 ARL6IP4-220ENST00000543566 1591 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
PDCD4Q53EL6 RTP5-201ENST00000343216 2296 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
PDCD4Q53EL6 CLN8-213ENST00000637156 1897 ntAPPRIS P1 TSL 5 BASIC20.2■□□□□ 0.82
PDCD4Q53EL6 TMEM178A-201ENST00000281961 1662 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
PDCD4Q53EL6 NEUROG1-201ENST00000314744 1668 ntAPPRIS P1 BASIC20.2■□□□□ 0.82
PDCD4Q53EL6 PARD3-207ENST00000374788 5996 ntAPPRIS ALT1 TSL 1 (best) BASIC20.2■□□□□ 0.82
PDCD4Q53EL6 KLF16-201ENST00000250916 2890 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
PDCD4Q53EL6 AC061979.1-201ENST00000532061 434 ntTSL 5 BASIC20.2■□□□□ 0.82
PDCD4Q53EL6 SAP25-203ENST00000614631 987 ntAPPRIS P2 TSL 2 BASIC20.2■□□□□ 0.82
PDCD4Q53EL6 HLA-DPB1-211ENST00000418931 1560 ntAPPRIS P2 BASIC20.2■□□□□ 0.82
PDCD4Q53EL6 CAMK2B-207ENST00000358707 1895 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
PDCD4Q53EL6 IRF7-204ENST00000397570 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
PDCD4Q53EL6 ARSA-205ENST00000453344 1650 ntTSL 2 BASIC20.19■□□□□ 0.82
PDCD4Q53EL6 JADE2-204ENST00000402835 2797 ntTSL 5 BASIC20.19■□□□□ 0.82
PDCD4Q53EL6 HSD17B1-202ENST00000585807 4982 ntAPPRIS P3 TSL 1 (best) BASIC20.19■□□□□ 0.82
PDCD4Q53EL6 SYT5-202ENST00000537500 2612 ntAPPRIS P1 TSL 2 BASIC20.19■□□□□ 0.82
PDCD4Q53EL6 EMC9-201ENST00000216799 835 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
PDCD4Q53EL6 RNF208-201ENST00000391553 1077 ntAPPRIS P1 BASIC20.19■□□□□ 0.82
PDCD4Q53EL6 SRR-208ENST00000576848 588 ntTSL 4 BASIC20.19■□□□□ 0.82
PDCD4Q53EL6 MGAT4B-201ENST00000292591 2446 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
PDCD4Q53EL6 NPNT-204ENST00000453617 2419 ntAPPRIS ALT1 TSL 2 BASIC20.19■□□□□ 0.82
PDCD4Q53EL6 SQLE-206ENST00000523430 1879 ntTSL 2 BASIC20.19■□□□□ 0.82
PDCD4Q53EL6 DENND4B-201ENST00000361217 5706 ntAPPRIS P2 TSL 1 (best) BASIC20.19■□□□□ 0.82
PDCD4Q53EL6 DDIT4-201ENST00000307365 1748 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
PDCD4Q53EL6 AC079328.2-202ENST00000560903 1410 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
PDCD4Q53EL6 INTS11-208ENST00000435064 2148 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
PDCD4Q53EL6 DMRTA2-202ENST00000418121 2840 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
PDCD4Q53EL6 EXOC3L2-202ENST00000413988 2964 ntAPPRIS P1 TSL 5 BASIC20.18■□□□□ 0.82
PDCD4Q53EL6 GPRIN2-202ENST00000374317 1966 ntAPPRIS P1 TSL 3 BASIC20.18■□□□□ 0.82
PDCD4Q53EL6 GMPPA-205ENST00000373917 1630 ntTSL 5 BASIC20.18■□□□□ 0.82
PDCD4Q53EL6 TNFRSF25-201ENST00000348333 1119 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
PDCD4Q53EL6 TNFRSF25-202ENST00000351748 705 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
PDCD4Q53EL6 C9orf47-202ENST00000375850 859 ntAPPRIS ALT2 TSL 3 BASIC20.18■□□□□ 0.82
PDCD4Q53EL6 STOX1-202ENST00000399162 935 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
PDCD4Q53EL6 STOX1-203ENST00000399165 1135 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
PDCD4Q53EL6 CDKN2A-207ENST00000497750 565 ntTSL 4 BASIC20.18■□□□□ 0.82
PDCD4Q53EL6 CDKN2A-212ENST00000578845 678 ntTSL 2 BASIC20.18■□□□□ 0.82
PDCD4Q53EL6 SF1-220ENST00000626028 704 ntTSL 2 BASIC20.18■□□□□ 0.82
PDCD4Q53EL6 HAUS7-211ENST00000626181 414 ntAPPRIS ALT2 TSL 5 BASIC20.18■□□□□ 0.82
PDCD4Q53EL6 SHB-201ENST00000377707 2783 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
PDCD4Q53EL6 ZNF622-201ENST00000308683 1699 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
PDCD4Q53EL6 FAM69B-202ENST00000371692 1668 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
PDCD4Q53EL6 UBR2-203ENST00000372903 2423 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
PDCD4Q53EL6 PYGO2-201ENST00000368456 1306 ntTSL 2 BASIC20.18■□□□□ 0.82
PDCD4Q53EL6 ALG1-201ENST00000262374 2132 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
PDCD4Q53EL6 NTRK3-206ENST00000540489 2145 ntTSL 5 BASIC20.18■□□□□ 0.82
PDCD4Q53EL6 DUSP7-202ENST00000495880 3340 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
PDCD4Q53EL6 NDOR1-201ENST00000344894 1794 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
PDCD4Q53EL6 SPATA5L1-201ENST00000305560 2570 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
PDCD4Q53EL6 NAB2-202ENST00000342556 2318 ntTSL 5 BASIC20.18■□□□□ 0.82
PDCD4Q53EL6 ME3-212ENST00000543262 2311 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
PDCD4Q53EL6 NAAA-201ENST00000286733 1900 ntAPPRIS P2 TSL 5 BASIC20.17■□□□□ 0.82
PDCD4Q53EL6 RNF32-207ENST00000405335 1938 ntAPPRIS P1 TSL 5 BASIC20.17■□□□□ 0.82
PDCD4Q53EL6 CHRNB2-205ENST00000637900 2390 ntAPPRIS ALT1 TSL 5 BASIC20.17■□□□□ 0.82
PDCD4Q53EL6 LINC01011-201ENST00000445000 2811 ntTSL 2 BASIC20.17■□□□□ 0.82
PDCD4Q53EL6 TTC7A-201ENST00000319190 5157 ntAPPRIS P1 TSL 2 BASIC20.17■□□□□ 0.82
PDCD4Q53EL6 PALM-207ENST00000590161 2137 ntTSL 4 BASIC20.17■□□□□ 0.82
PDCD4Q53EL6 FMR1-204ENST00000370471 4125 ntTSL 5 BASIC20.17■□□□□ 0.82
PDCD4Q53EL6 YIF1B-202ENST00000337679 1257 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
PDCD4Q53EL6 SNX3-202ENST00000349379 890 ntTSL 2 BASIC20.17■□□□□ 0.82
PDCD4Q53EL6 TMEM134-202ENST00000393877 823 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
PDCD4Q53EL6 PRMT2-204ENST00000397628 954 ntTSL 2 BASIC20.17■□□□□ 0.82
PDCD4Q53EL6 TRAPPC5-202ENST00000426877 765 ntAPPRIS P1 TSL 2 BASIC20.17■□□□□ 0.82
PDCD4Q53EL6 RPP21-222ENST00000433076 577 ntTSL 2 BASIC20.17■□□□□ 0.82
PDCD4Q53EL6 AC004707.1-201ENST00000511627 715 ntTSL 3 BASIC20.17■□□□□ 0.82
PDCD4Q53EL6 TRIR-205ENST00000592273 783 ntTSL 3 BASIC20.17■□□□□ 0.82
PDCD4Q53EL6 CTAG1A-201ENST00000593606 993 ntTSL 5 BASIC20.17■□□□□ 0.82
PDCD4Q53EL6 KCNS3-201ENST00000304101 2333 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
PDCD4Q53EL6 SMIM3-201ENST00000526627 2332 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
PDCD4Q53EL6 ST3GAL4-209ENST00000526727 1967 ntAPPRIS ALT1 TSL 1 (best) BASIC20.17■□□□□ 0.82
PDCD4Q53EL6 RBAK-202ENST00000396912 6551 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
PDCD4Q53EL6 ZNF773-204ENST00000598770 2019 ntAPPRIS ALT2 TSL 2 BASIC20.17■□□□□ 0.82
PDCD4Q53EL6 FBLN5-202ENST00000342058 2123 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
PDCD4Q53EL6 MAP3K21-203ENST00000366624 5809 ntAPPRIS P2 TSL 1 (best) BASIC20.17■□□□□ 0.82
PDCD4Q53EL6 KRT3-201ENST00000417996 2319 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Retrieved 100 of 98,524 protein–RNA pairs in 14.3 ms