Protein–RNA interactions for Protein: Q2TBC4

PRICKLE4, Prickle-like protein 4, humanhuman

Predictions only

Length 344 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRICKLE4Q2TBC4 CLDN5-201ENST00000403084 2357 ntBASIC19.68■□□□□ 0.74
PRICKLE4Q2TBC4 ZPBP-201ENST00000046087 1213 ntAPPRIS P3 TSL 1 (best) BASIC19.68■□□□□ 0.74
PRICKLE4Q2TBC4 LINC01942-201ENST00000521373 513 ntTSL 4 BASIC19.68■□□□□ 0.74
PRICKLE4Q2TBC4 TSEN15-207ENST00000533373 618 ntTSL 2 BASIC19.68■□□□□ 0.74
PRICKLE4Q2TBC4 TSPAN11-202ENST00000535215 988 ntTSL 2 BASIC19.68■□□□□ 0.74
PRICKLE4Q2TBC4 PYCARD-AS1-201ENST00000561916 1095 ntTSL 2 BASIC19.68■□□□□ 0.74
PRICKLE4Q2TBC4 TRAPPC2L-213ENST00000567895 854 ntTSL 3 BASIC19.68■□□□□ 0.74
PRICKLE4Q2TBC4 AC138907.5-202ENST00000569484 235 ntBASIC19.68■□□□□ 0.74
PRICKLE4Q2TBC4 MIF4GD-211ENST00000580571 952 ntTSL 2 BASIC19.68■□□□□ 0.74
PRICKLE4Q2TBC4 GPR27-201ENST00000304411 2447 ntAPPRIS P1 BASIC19.68■□□□□ 0.74
PRICKLE4Q2TBC4 MRPL37-206ENST00000605337 1582 ntTSL 5 BASIC19.68■□□□□ 0.74
PRICKLE4Q2TBC4 LPCAT4-201ENST00000314891 2262 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
PRICKLE4Q2TBC4 BARHL1-201ENST00000263610 2341 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
PRICKLE4Q2TBC4 MSANTD1-204ENST00000510580 2039 ntTSL 5 BASIC19.68■□□□□ 0.74
PRICKLE4Q2TBC4 DOK3-202ENST00000357198 1729 ntTSL 2 BASIC19.68■□□□□ 0.74
PRICKLE4Q2TBC4 TSPAN4-206ENST00000397408 1430 ntAPPRIS P1 TSL 2 BASIC19.68■□□□□ 0.74
PRICKLE4Q2TBC4 PTPN18-202ENST00000347849 2472 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
PRICKLE4Q2TBC4 GSX2-201ENST00000326902 1812 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
PRICKLE4Q2TBC4 CRHR1-201ENST00000293493 2621 ntTSL 5 BASIC19.67■□□□□ 0.74
PRICKLE4Q2TBC4 NR5A1-204ENST00000620110 2975 ntTSL 5 BASIC19.67■□□□□ 0.74
PRICKLE4Q2TBC4 ZNF669-201ENST00000343381 1951 ntAPPRIS P3 TSL 1 (best) BASIC19.67■□□□□ 0.74
PRICKLE4Q2TBC4 UCN-201ENST00000296099 795 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
PRICKLE4Q2TBC4 GADD45A-201ENST00000370985 803 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
PRICKLE4Q2TBC4 TMEM54-202ENST00000373463 999 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
PRICKLE4Q2TBC4 FOXB2-201ENST00000376708 1299 ntAPPRIS P1 BASIC19.67■□□□□ 0.74
PRICKLE4Q2TBC4 AC093833.1-201ENST00000442821 553 ntTSL 5 BASIC19.67■□□□□ 0.74
PRICKLE4Q2TBC4 TMEM70-203ENST00000517439 617 ntTSL 2 BASIC19.67■□□□□ 0.74
PRICKLE4Q2TBC4 AC012414.4-201ENST00000560839 1074 ntTSL 5 BASIC19.67■□□□□ 0.74
PRICKLE4Q2TBC4 AC104187.1-201ENST00000607510 612 ntBASIC19.67■□□□□ 0.74
PRICKLE4Q2TBC4 AC060814.5-201ENST00000630916 1074 ntTSL 2 BASIC19.67■□□□□ 0.74
PRICKLE4Q2TBC4 LINC01140-202ENST00000467438 2375 ntTSL 2 BASIC19.67■□□□□ 0.74
PRICKLE4Q2TBC4 TM7SF2-201ENST00000279263 1722 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
PRICKLE4Q2TBC4 BCKDK-201ENST00000219794 2128 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
PRICKLE4Q2TBC4 SLC35D3-201ENST00000331858 2359 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
PRICKLE4Q2TBC4 UBE2I-205ENST00000402301 1708 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
PRICKLE4Q2TBC4 EIPR1-206ENST00000443925 1771 ntTSL 3 BASIC19.66■□□□□ 0.74
PRICKLE4Q2TBC4 LARP6-202ENST00000344870 527 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
PRICKLE4Q2TBC4 RASGRP2-203ENST00000377486 667 ntTSL 3 BASIC19.66■□□□□ 0.74
PRICKLE4Q2TBC4 RAMP1-203ENST00000404910 857 ntTSL 2 BASIC19.66■□□□□ 0.74
PRICKLE4Q2TBC4 ATP6V0B-204ENST00000471859 865 ntTSL 5 BASIC19.66■□□□□ 0.74
PRICKLE4Q2TBC4 ZSWIM7-205ENST00000472495 703 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
PRICKLE4Q2TBC4 AC093627.4-202ENST00000479592 591 ntTSL 4 BASIC19.66■□□□□ 0.74
PRICKLE4Q2TBC4 SLC25A45-206ENST00000526432 894 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
PRICKLE4Q2TBC4 TESC-206ENST00000541210 936 ntTSL 3 BASIC19.66■□□□□ 0.74
PRICKLE4Q2TBC4 KRT18P61-201ENST00000585825 1298 ntBASIC19.66■□□□□ 0.74
PRICKLE4Q2TBC4 TNFRSF11A-207ENST00000639222 855 ntAPPRIS ALT2 TSL 5 BASIC19.66■□□□□ 0.74
PRICKLE4Q2TBC4 PCSK6-215ENST00000611967 3336 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
PRICKLE4Q2TBC4 FAM83D-202ENST00000619850 2361 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
PRICKLE4Q2TBC4 HIRA-201ENST00000263208 4053 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
PRICKLE4Q2TBC4 SEC61A2-205ENST00000379033 2462 ntTSL 2 BASIC19.66■□□□□ 0.74
PRICKLE4Q2TBC4 RAP1B-204ENST00000393436 2049 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
PRICKLE4Q2TBC4 CPEB1-AS1-201ENST00000560650 2138 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
PRICKLE4Q2TBC4 REXO1-201ENST00000170168 4591 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
PRICKLE4Q2TBC4 CDK18-203ENST00000429964 1648 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
PRICKLE4Q2TBC4 USP12-201ENST00000282344 4511 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
PRICKLE4Q2TBC4 PGAP3-204ENST00000429199 970 ntTSL 2 BASIC19.65■□□□□ 0.74
PRICKLE4Q2TBC4 ATOX1-207ENST00000524142 749 ntAPPRIS P1 TSL 5 BASIC19.65■□□□□ 0.74
PRICKLE4Q2TBC4 CEBPE-201ENST00000206513 1554 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
PRICKLE4Q2TBC4 MAP1LC3A-201ENST00000360668 1574 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
PRICKLE4Q2TBC4 DSG2-201ENST00000261590 5831 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
PRICKLE4Q2TBC4 ZMYND11-210ENST00000403354 1664 ntTSL 5 BASIC19.65■□□□□ 0.74
PRICKLE4Q2TBC4 ERLEC1-203ENST00000405123 1756 ntTSL 5 BASIC19.65■□□□□ 0.74
PRICKLE4Q2TBC4 LYPD1-202ENST00000397463 1891 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
PRICKLE4Q2TBC4 FEM1AP4-201ENST00000443167 1987 ntBASIC19.64■□□□□ 0.74
PRICKLE4Q2TBC4 DOCK5-208ENST00000481100 2166 ntTSL 1 (best) BASIC19.64■□□□□ 0.74
PRICKLE4Q2TBC4 CENPVL3-201ENST00000417339 864 ntAPPRIS P1 BASIC19.64■□□□□ 0.73
PRICKLE4Q2TBC4 GALNS-213ENST00000569433 723 ntTSL 3 BASIC19.64■□□□□ 0.73
PRICKLE4Q2TBC4 AC110285.4-201ENST00000572590 424 ntTSL 3 BASIC19.64■□□□□ 0.73
PRICKLE4Q2TBC4 HIST1H2AL-201ENST00000613174 393 ntAPPRIS P1 BASIC19.64■□□□□ 0.73
PRICKLE4Q2TBC4 C10orf95-201ENST00000625129 1469 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
PRICKLE4Q2TBC4 VKORC1L1-202ENST00000434382 1541 ntTSL 2 BASIC19.64■□□□□ 0.73
PRICKLE4Q2TBC4 H2AFX-202ENST00000530167 1614 ntAPPRIS P1 BASIC19.64■□□□□ 0.73
PRICKLE4Q2TBC4 C10orf91-202ENST00000392630 1846 ntTSL 2 BASIC19.64■□□□□ 0.73
PRICKLE4Q2TBC4 ATP6AP1-201ENST00000369762 2099 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
PRICKLE4Q2TBC4 SLC1A6-203ENST00000544886 2420 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
PRICKLE4Q2TBC4 TRIM28-201ENST00000253024 2960 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
PRICKLE4Q2TBC4 GPC1-202ENST00000420138 1835 ntTSL 5 BASIC19.63■□□□□ 0.73
PRICKLE4Q2TBC4 NEURL4-201ENST00000315614 5182 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
PRICKLE4Q2TBC4 FAM3A-202ENST00000359889 1712 ntAPPRIS P1 TSL 2 BASIC19.63■□□□□ 0.73
PRICKLE4Q2TBC4 TYMP-202ENST00000395678 1614 ntAPPRIS P3 TSL 1 (best) BASIC19.63■□□□□ 0.73
PRICKLE4Q2TBC4 TPM1-208ENST00000404484 1568 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
PRICKLE4Q2TBC4 STX18-205ENST00000505286 1380 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
PRICKLE4Q2TBC4 UBE2D3-201ENST00000321805 1087 ntAPPRIS ALT1 TSL 5 BASIC19.63■□□□□ 0.73
PRICKLE4Q2TBC4 RAP1B-202ENST00000341355 714 ntAPPRIS P1 TSL 3 BASIC19.63■□□□□ 0.73
PRICKLE4Q2TBC4 EFCAB6-202ENST00000356087 1129 ntTSL 5 BASIC19.63■□□□□ 0.73
PRICKLE4Q2TBC4 SPOCK2-203ENST00000412663 1284 ntTSL 5 BASIC19.63■□□□□ 0.73
PRICKLE4Q2TBC4 AC010141.2-201ENST00000452426 721 ntBASIC19.63■□□□□ 0.73
PRICKLE4Q2TBC4 BEX2-204ENST00000536889 1077 ntTSL 2 BASIC19.63■□□□□ 0.73
PRICKLE4Q2TBC4 NTF6G-201ENST00000591094 616 ntBASIC19.63■□□□□ 0.73
PRICKLE4Q2TBC4 AC093762.3-201ENST00000641918 318 ntAPPRIS P1 BASIC19.63■□□□□ 0.73
PRICKLE4Q2TBC4 AL024507.2-201ENST00000606070 2574 ntBASIC19.63■□□□□ 0.73
PRICKLE4Q2TBC4 PDXDC1-205ENST00000535621 2048 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
PRICKLE4Q2TBC4 OTOP1-201ENST00000296358 1864 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
PRICKLE4Q2TBC4 HAND1-201ENST00000231121 1738 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
PRICKLE4Q2TBC4 ZNF622-201ENST00000308683 1699 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
PRICKLE4Q2TBC4 AC061975.6-201ENST00000579045 1553 ntBASIC19.62■□□□□ 0.73
PRICKLE4Q2TBC4 HLA-G-204ENST00000376828 1490 ntAPPRIS ALT2 BASIC19.62■□□□□ 0.73
PRICKLE4Q2TBC4 SPATA22-214ENST00000575375 1374 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
PRICKLE4Q2TBC4 ACHE-201ENST00000241069 2172 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
PRICKLE4Q2TBC4 DTYMK-201ENST00000305784 1232 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 36.6 ms