Protein–RNA interactions for Protein: Q03591

CFHR1, Complement factor H-related protein 1, humanhuman

Predictions only

Length 330 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CFHR1Q03591 ZSCAN18-212ENST00000600404 1934 ntAPPRIS ALT2 TSL 2 BASIC20.27■□□□□ 0.84
CFHR1Q03591 MGAT4D-208ENST00000515354 1806 ntTSL 3 BASIC20.27■□□□□ 0.84
CFHR1Q03591 CDCA4-202ENST00000392590 1536 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
CFHR1Q03591 MAPKAPK5-AS1-201ENST00000428207 2290 ntTSL 1 (best) BASIC20.27■□□□□ 0.83
CFHR1Q03591 MMP23B-201ENST00000356026 1326 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
CFHR1Q03591 CXCL14-201ENST00000337225 1971 ntAPPRIS P2 TSL 1 (best) BASIC20.26■□□□□ 0.83
CFHR1Q03591 SPNS1-207ENST00000565975 1979 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
CFHR1Q03591 AC133065.2-201ENST00000573379 2147 ntTSL 2 BASIC20.26■□□□□ 0.83
CFHR1Q03591 TMEM175-212ENST00000508204 1399 ntTSL 3 BASIC20.26■□□□□ 0.83
CFHR1Q03591 MTHFS-201ENST00000258874 907 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
CFHR1Q03591 SMNDC1-201ENST00000369592 1110 ntAPPRIS P1 TSL 3 BASIC20.26■□□□□ 0.83
CFHR1Q03591 HOXD12-201ENST00000404162 841 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
CFHR1Q03591 ZNF295-AS1-201ENST00000412906 952 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
CFHR1Q03591 AC016405.3-201ENST00000607710 860 ntBASIC20.26■□□□□ 0.83
CFHR1Q03591 APOC3-205ENST00000630701 541 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
CFHR1Q03591 PANK2-201ENST00000316562 2280 ntAPPRIS P2 TSL 1 (best) BASIC20.26■□□□□ 0.83
CFHR1Q03591 LTB4R-201ENST00000345363 1616 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
CFHR1Q03591 SMOX-212ENST00000621355 2322 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
CFHR1Q03591 CASP16P-201ENST00000428155 1433 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
CFHR1Q03591 KLHDC9-201ENST00000368011 1314 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
CFHR1Q03591 RALGPS1-207ENST00000394022 1672 ntTSL 2 BASIC20.26■□□□□ 0.83
CFHR1Q03591 ABHD6-201ENST00000295962 2393 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
CFHR1Q03591 GPRC5B-210ENST00000569847 1830 ntAPPRIS P2 TSL 2 BASIC20.25■□□□□ 0.83
CFHR1Q03591 SYT7-203ENST00000539008 2061 ntTSL 5 BASIC20.25■□□□□ 0.83
CFHR1Q03591 EEFSEC-201ENST00000254730 2232 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
CFHR1Q03591 COA6-202ENST00000366613 641 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
CFHR1Q03591 BET1L-204ENST00000410108 637 ntTSL 3 BASIC20.25■□□□□ 0.83
CFHR1Q03591 MIPEPP3-201ENST00000412105 444 ntBASIC20.25■□□□□ 0.83
CFHR1Q03591 C17orf107-202ENST00000521575 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
CFHR1Q03591 DHPS-223ENST00000614126 1124 ntTSL 5 BASIC20.25■□□□□ 0.83
CFHR1Q03591 OR10C1-204ENST00000622521 1039 ntBASIC20.25■□□□□ 0.83
CFHR1Q03591 CADM1-201ENST00000331581 1766 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
CFHR1Q03591 RITA1-202ENST00000549621 2041 ntAPPRIS P1 TSL 2 BASIC20.25■□□□□ 0.83
CFHR1Q03591 UNC50-204ENST00000409975 2172 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
CFHR1Q03591 CERS5-201ENST00000317551 2051 ntAPPRIS P3 TSL 2 BASIC20.25■□□□□ 0.83
CFHR1Q03591 MSL1-203ENST00000577454 2081 ntTSL 2 BASIC20.25■□□□□ 0.83
CFHR1Q03591 SMARCB1-202ENST00000344921 1728 ntTSL 2 BASIC20.24■□□□□ 0.83
CFHR1Q03591 VPS13B-204ENST00000441350 1626 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
CFHR1Q03591 CMPK2-202ENST00000404168 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
CFHR1Q03591 MKRN4P-201ENST00000444706 1521 ntBASIC20.24■□□□□ 0.83
CFHR1Q03591 AC010542.4-201ENST00000563151 1910 ntBASIC20.24■□□□□ 0.83
CFHR1Q03591 C3orf80-201ENST00000326474 2718 ntAPPRIS P1 BASIC20.24■□□□□ 0.83
CFHR1Q03591 RNPS1-201ENST00000301730 1276 ntAPPRIS P1 TSL 2 BASIC20.24■□□□□ 0.83
CFHR1Q03591 C4orf48-201ENST00000409248 433 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
CFHR1Q03591 WIPF1-207ENST00000410117 777 ntTSL 3 BASIC20.24■□□□□ 0.83
CFHR1Q03591 FAM47E-204ENST00000510328 1002 ntAPPRIS ALT2 TSL 2 BASIC20.24■□□□□ 0.83
CFHR1Q03591 RNA5SP413-201ENST00000516373 109 ntBASIC20.24■□□□□ 0.83
CFHR1Q03591 PHB2-213ENST00000546111 858 ntTSL 2 BASIC20.24■□□□□ 0.83
CFHR1Q03591 Z92544.1-201ENST00000567091 730 ntTSL 3 BASIC20.24■□□□□ 0.83
CFHR1Q03591 MAGIX-202ENST00000595224 1238 ntAPPRIS P2 TSL 5 BASIC20.24■□□□□ 0.83
CFHR1Q03591 GPX1-204ENST00000620890 897 ntAPPRIS ALT2 TSL 5 BASIC20.24■□□□□ 0.83
CFHR1Q03591 PNMA6A-201ENST00000421798 2209 ntAPPRIS P1 TSL 2 BASIC20.24■□□□□ 0.83
CFHR1Q03591 POTED-202ENST00000620442 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
CFHR1Q03591 ZNF410-206ENST00000540593 1722 ntTSL 2 BASIC20.24■□□□□ 0.83
CFHR1Q03591 PNKP-201ENST00000322344 2041 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
CFHR1Q03591 DONSON-210ENST00000453626 2332 ntTSL 5 BASIC20.24■□□□□ 0.83
CFHR1Q03591 TSPAN3-202ENST00000346495 1647 ntTSL 2 BASIC20.24■□□□□ 0.83
CFHR1Q03591 SLC52A2-211ENST00000532887 2147 ntAPPRIS P1 TSL 5 BASIC20.23■□□□□ 0.83
CFHR1Q03591 DPEP2-204ENST00000572888 2112 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
CFHR1Q03591 LHX2-201ENST00000373615 2554 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
CFHR1Q03591 AL512625.2-201ENST00000417533 625 ntBASIC20.23■□□□□ 0.83
CFHR1Q03591 ALKBH6-212ENST00000485128 959 ntTSL 5 BASIC20.23■□□□□ 0.83
CFHR1Q03591 SCARB1-211ENST00000546215 1597 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
CFHR1Q03591 RARRES2-202ENST00000466675 1618 ntAPPRIS P1 TSL 2 BASIC20.23■□□□□ 0.83
CFHR1Q03591 CNEP1R1-202ENST00000427478 2117 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
CFHR1Q03591 DMRT2-209ENST00000635183 2190 ntTSL 5 BASIC20.22■□□□□ 0.83
CFHR1Q03591 OIP5-AS1-202ENST00000501665 1384 ntTSL 2 BASIC20.22■□□□□ 0.83
CFHR1Q03591 WRNIP1-205ENST00000618555 2651 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
CFHR1Q03591 DUX4-204ENST00000569241 1574 ntAPPRIS P2 TSL 1 (best) BASIC20.22■□□□□ 0.83
CFHR1Q03591 CLN3-240ENST00000631023 1586 ntTSL 5 BASIC20.22■□□□□ 0.83
CFHR1Q03591 C18orf65-201ENST00000622985 2076 ntTSL 2 BASIC20.22■□□□□ 0.83
CFHR1Q03591 ALG1-202ENST00000544428 1419 ntTSL 2 BASIC20.22■□□□□ 0.83
CFHR1Q03591 MRPL12-201ENST00000333676 1028 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
CFHR1Q03591 ZCCHC9-204ENST00000438268 1248 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
CFHR1Q03591 ZNF148-203ENST00000468369 1025 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
CFHR1Q03591 AC025754.1-201ENST00000507566 407 ntTSL 3 BASIC20.22■□□□□ 0.83
CFHR1Q03591 TNNI3-207ENST00000588882 669 ntTSL 2 BASIC20.22■□□□□ 0.83
CFHR1Q03591 ETHE1-205ENST00000600651 1052 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
CFHR1Q03591 AC243732.1-201ENST00000612648 864 ntBASIC20.22■□□□□ 0.83
CFHR1Q03591 ABHD1-207ENST00000621324 1078 ntTSL 5 BASIC20.22■□□□□ 0.83
CFHR1Q03591 TMEM176B-203ENST00000434545 1303 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
CFHR1Q03591 C12orf42-208ENST00000548883 1336 ntAPPRIS P2 TSL 1 (best) BASIC20.22■□□□□ 0.83
CFHR1Q03591 PCSK6-216ENST00000615296 2921 ntTSL 5 BASIC20.22■□□□□ 0.83
CFHR1Q03591 PHLDB2-210ENST00000478922 1861 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
CFHR1Q03591 CCDC9-201ENST00000221922 2093 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
CFHR1Q03591 AC132008.2-203ENST00000418868 1552 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
CFHR1Q03591 NAA35-202ENST00000376040 1797 ntTSL 2 BASIC20.21■□□□□ 0.83
CFHR1Q03591 NGLY1-204ENST00000396649 2024 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
CFHR1Q03591 SERF1A-201ENST00000317633 963 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
CFHR1Q03591 FNDC11-201ENST00000370097 1119 ntAPPRIS P1 TSL 2 BASIC20.21■□□□□ 0.83
CFHR1Q03591 AL121761.1-202ENST00000412571 415 ntTSL 2 BASIC20.21■□□□□ 0.83
CFHR1Q03591 AL596275.1-201ENST00000423464 877 ntBASIC20.21■□□□□ 0.83
CFHR1Q03591 AC106738.2-202ENST00000558156 533 ntTSL 4 BASIC20.21■□□□□ 0.83
CFHR1Q03591 PSME3-210ENST00000590720 998 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
CFHR1Q03591 P2RX2-201ENST00000343948 1494 ntAPPRIS P4 TSL 1 (best) BASIC20.21■□□□□ 0.83
CFHR1Q03591 NKX6-3-202ENST00000524115 1683 ntTSL 2 BASIC20.21■□□□□ 0.83
CFHR1Q03591 NCK2-201ENST00000233154 2683 ntAPPRIS P1 TSL 5 BASIC20.21■□□□□ 0.83
CFHR1Q03591 POFUT1-201ENST00000375730 1507 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
CFHR1Q03591 COMMD5-207ENST00000543949 1571 ntAPPRIS P1 TSL 3 BASIC20.21■□□□□ 0.83
CFHR1Q03591 ACTR1B-201ENST00000289228 2243 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 19.5 ms