Protein–RNA interactions for Protein: P68431

HIST1H3A, Histone H3.1, humanhuman

Predictions only

Length 136 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST1H3AP68431 ILKAP-211ENST00000612675 1335 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
HIST1H3AP68431 TMEM17-201ENST00000335390 1797 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
HIST1H3AP68431 RASGEF1C-201ENST00000361132 2243 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
HIST1H3AP68431 ZNF622-201ENST00000308683 1699 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
HIST1H3AP68431 GPR35-204ENST00000430267 1399 ntAPPRIS ALT2 TSL 5 BASIC18.44■□□□□ 0.54
HIST1H3AP68431 TNFAIP8L3-202ENST00000637513 2002 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
HIST1H3AP68431 LYPD1-202ENST00000397463 1891 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
HIST1H3AP68431 TMEM125-201ENST00000432792 1850 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
HIST1H3AP68431 FBXO17-201ENST00000292852 2386 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
HIST1H3AP68431 DNAJB11-202ENST00000439351 2398 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
HIST1H3AP68431 CRB3-202ENST00000356762 733 ntAPPRIS P4 TSL 1 (best) BASIC18.44■□□□□ 0.54
HIST1H3AP68431 CHTF8-210ENST00000523421 766 ntTSL 3 BASIC18.44■□□□□ 0.54
HIST1H3AP68431 GLI4-210ENST00000523522 1297 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
HIST1H3AP68431 FEZ1-205ENST00000524435 750 ntTSL 2 BASIC18.44■□□□□ 0.54
HIST1H3AP68431 TUNAR-203ENST00000554321 767 ntAPPRIS P1 TSL 4 BASIC18.44■□□□□ 0.54
HIST1H3AP68431 RNF114-202ENST00000622920 1284 ntTSL 5 BASIC18.44■□□□□ 0.54
HIST1H3AP68431 NAPEPLD-208ENST00000427257 1822 ntAPPRIS P1 TSL 2 BASIC18.44■□□□□ 0.54
HIST1H3AP68431 OAF-201ENST00000328965 2525 ntAPPRIS P2 TSL 1 (best) BASIC18.44■□□□□ 0.54
HIST1H3AP68431 MFF-207ENST00000409565 1548 ntTSL 2 BASIC18.44■□□□□ 0.54
HIST1H3AP68431 ASCL2-201ENST00000331289 1852 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
HIST1H3AP68431 ALX3-201ENST00000369792 1859 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
HIST1H3AP68431 C1QL4-201ENST00000334221 2071 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
HIST1H3AP68431 EML2-201ENST00000245925 2264 ntAPPRIS P3 TSL 1 (best) BASIC18.43■□□□□ 0.54
HIST1H3AP68431 LTK-201ENST00000263800 3046 ntAPPRIS P4 TSL 1 (best) BASIC18.43■□□□□ 0.54
HIST1H3AP68431 AC138649.1-201ENST00000619611 1449 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
HIST1H3AP68431 NOC4L-201ENST00000330579 1632 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
HIST1H3AP68431 TMEM179B-205ENST00000533861 797 ntTSL 5 BASIC18.43■□□□□ 0.54
HIST1H3AP68431 PRSS22-203ENST00000571228 1037 ntTSL 2 BASIC18.43■□□□□ 0.54
HIST1H3AP68431 AC053503.5-201ENST00000601508 636 ntBASIC18.43■□□□□ 0.54
HIST1H3AP68431 P2RX4-202ENST00000337233 2032 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
HIST1H3AP68431 ADD1-202ENST00000355842 4743 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
HIST1H3AP68431 RGS20-202ENST00000297313 2104 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
HIST1H3AP68431 UCK2-201ENST00000367879 1375 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
HIST1H3AP68431 CSNK1G3-206ENST00000511130 1356 ntTSL 2 BASIC18.42■□□□□ 0.54
HIST1H3AP68431 EIPR1-206ENST00000443925 1771 ntTSL 3 BASIC18.42■□□□□ 0.54
HIST1H3AP68431 MAF1-205ENST00000534585 1754 ntTSL 5 BASIC18.42■□□□□ 0.54
HIST1H3AP68431 UBE2J2-201ENST00000347370 2387 ntTSL 3 BASIC18.42■□□□□ 0.54
HIST1H3AP68431 KCNN4-201ENST00000262888 2240 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
HIST1H3AP68431 CHST8-202ENST00000434302 2225 ntAPPRIS P1 TSL 2 BASIC18.42■□□□□ 0.54
HIST1H3AP68431 MPST-205ENST00000404802 1453 ntAPPRIS P1 TSL 3 BASIC18.42■□□□□ 0.54
HIST1H3AP68431 PPCS-202ENST00000372560 793 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
HIST1H3AP68431 PPP1R14A-205ENST00000591585 949 ntTSL 2 BASIC18.42■□□□□ 0.54
HIST1H3AP68431 AF106564.1-201ENST00000607058 2553 ntBASIC18.42■□□□□ 0.54
HIST1H3AP68431 UBE2I-205ENST00000402301 1708 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
HIST1H3AP68431 YBX1-201ENST00000321358 1514 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
HIST1H3AP68431 RARG-204ENST00000543726 1779 ntTSL 2 BASIC18.42■□□□□ 0.54
HIST1H3AP68431 DYRK2-202ENST00000344096 8912 ntAPPRIS P4 TSL 1 (best) BASIC18.42■□□□□ 0.54
HIST1H3AP68431 SLC13A3-204ENST00000413164 2008 ntTSL 2 BASIC18.42■□□□□ 0.54
HIST1H3AP68431 EPHX3-201ENST00000221730 1822 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
HIST1H3AP68431 LINC00682-201ENST00000498940 1625 ntTSL 3 BASIC18.41■□□□□ 0.54
HIST1H3AP68431 YBX3-202ENST00000279550 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
HIST1H3AP68431 AL049796.1-201ENST00000565336 1766 ntBASIC18.41■□□□□ 0.54
HIST1H3AP68431 VPS29-206ENST00000549578 1523 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
HIST1H3AP68431 LRRC3C-201ENST00000377924 891 ntAPPRIS P1 TSL 3 BASIC18.41■□□□□ 0.54
HIST1H3AP68431 NMRAL1-202ENST00000404295 1233 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
HIST1H3AP68431 CROT-202ENST00000412227 1213 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
HIST1H3AP68431 CDKN2A-210ENST00000530628 748 ntAPPRIS P1 TSL 5 BASIC18.41■□□□□ 0.54
HIST1H3AP68431 AP003071.3-201ENST00000562506 366 ntTSL 3 BASIC18.41■□□□□ 0.54
HIST1H3AP68431 AL138963.3-201ENST00000610057 588 ntTSL 4 BASIC18.41■□□□□ 0.54
HIST1H3AP68431 ARL6IP4-220ENST00000543566 1591 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
HIST1H3AP68431 RASD1-202ENST00000579152 1404 ntTSL 2 BASIC18.4■□□□□ 0.54
HIST1H3AP68431 LSM14A-202ENST00000540746 2152 ntTSL 2 BASIC18.4■□□□□ 0.54
HIST1H3AP68431 AK1-201ENST00000223836 736 ntTSL 3 BASIC18.4■□□□□ 0.54
HIST1H3AP68431 RPL8-201ENST00000262584 1041 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
HIST1H3AP68431 PHLDA3-201ENST00000367309 896 ntAPPRIS P1 TSL 5 BASIC18.4■□□□□ 0.54
HIST1H3AP68431 CCDC28B-201ENST00000373602 1089 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
HIST1H3AP68431 CDKN2AIPNL-201ENST00000395009 800 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
HIST1H3AP68431 ARHGAP24-206ENST00000503995 1273 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
HIST1H3AP68431 NAE1-203ENST00000379463 1909 ntTSL 2 BASIC18.4■□□□□ 0.54
HIST1H3AP68431 EFHD1-201ENST00000264059 2259 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
HIST1H3AP68431 MYCN-201ENST00000281043 2602 ntAPPRIS P1 TSL 5 BASIC18.4■□□□□ 0.54
HIST1H3AP68431 EPO-201ENST00000252723 1330 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
HIST1H3AP68431 HAND1-201ENST00000231121 1738 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
HIST1H3AP68431 PMPCA-201ENST00000371717 2174 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
HIST1H3AP68431 TEAD2-208ENST00000598810 2191 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
HIST1H3AP68431 ZFYVE9-201ENST00000287727 5194 ntAPPRIS P4 TSL 5 BASIC18.39■□□□□ 0.54
HIST1H3AP68431 CRHR1-201ENST00000293493 2621 ntTSL 5 BASIC18.39■□□□□ 0.54
HIST1H3AP68431 AC007128.1-201ENST00000424460 1853 ntTSL 5 BASIC18.39■□□□□ 0.54
HIST1H3AP68431 JTB-203ENST00000368589 1216 ntTSL 2 BASIC18.39■□□□□ 0.53
HIST1H3AP68431 SCN1B-203ENST00000595652 814 ntTSL 2 BASIC18.39■□□□□ 0.53
HIST1H3AP68431 LRRC75A-201ENST00000409083 2656 ntAPPRIS P3 TSL 2 BASIC18.39■□□□□ 0.53
HIST1H3AP68431 SLC35A3-210ENST00000638371 2298 ntTSL 5 BASIC18.39■□□□□ 0.53
HIST1H3AP68431 RPS6-203ENST00000380384 1355 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
HIST1H3AP68431 DMRT2-203ENST00000358146 1965 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
HIST1H3AP68431 PHF2-201ENST00000359246 5569 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
HIST1H3AP68431 TM7SF2-201ENST00000279263 1722 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
HIST1H3AP68431 ANAPC13-204ENST00000510994 1840 ntAPPRIS P1 TSL 2 BASIC18.38■□□□□ 0.53
HIST1H3AP68431 MOSPD3-203ENST00000393950 1191 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
HIST1H3AP68431 SDHAP3-201ENST00000436493 736 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
HIST1H3AP68431 AC123595.1-201ENST00000440769 1046 ntBASIC18.38■□□□□ 0.53
HIST1H3AP68431 AL137779.2-201ENST00000554859 448 ntTSL 2 BASIC18.38■□□□□ 0.53
HIST1H3AP68431 AC145207.2-202ENST00000576554 565 ntTSL 5 BASIC18.38■□□□□ 0.53
HIST1H3AP68431 NGLY1-204ENST00000396649 2024 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
HIST1H3AP68431 FNDC10-201ENST00000422725 2085 ntAPPRIS P1 BASIC18.38■□□□□ 0.53
HIST1H3AP68431 MXRA8-201ENST00000309212 2273 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
HIST1H3AP68431 IKBKG-206ENST00000594239 2299 ntAPPRIS P3 TSL 1 (best) BASIC18.38■□□□□ 0.53
HIST1H3AP68431 C10orf55-202ENST00000412307 2360 ntAPPRIS P1 TSL 5 BASIC18.38■□□□□ 0.53
HIST1H3AP68431 DACT2-203ENST00000607983 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
HIST1H3AP68431 GNG4-203ENST00000391854 5104 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
HIST1H3AP68431 EPHA8-202ENST00000374644 1802 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 21 ms