Protein–RNA interactions for Protein: P56749

CLDN12, Claudin-12, humanhuman

Predictions only

Length 244 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN12P56749 LRP5L-203ENST00000444995 1714 ntAPPRIS ALT2 TSL 5 BASIC18.29■□□□□ 0.52
CLDN12P56749 PAQR9-201ENST00000340634 2452 ntAPPRIS P1 BASIC18.29■□□□□ 0.52
CLDN12P56749 SENP5-204ENST00000445299 2491 ntTSL 2 BASIC18.29■□□□□ 0.52
CLDN12P56749 ADAM9-203ENST00000466936 2053 ntTSL 2 BASIC18.29■□□□□ 0.52
CLDN12P56749 PAN3-201ENST00000380958 2833 ntAPPRIS P2 TSL 5 BASIC18.29■□□□□ 0.52
CLDN12P56749 SQLE-206ENST00000523430 1879 ntTSL 2 BASIC18.29■□□□□ 0.52
CLDN12P56749 OLIG3-201ENST00000367734 2049 ntAPPRIS P1 BASIC18.29■□□□□ 0.52
CLDN12P56749 RNF165-205ENST00000588679 2904 ntBASIC18.29■□□□□ 0.52
CLDN12P56749 MDK-203ENST00000395566 828 ntAPPRIS P2 TSL 1 (best) BASIC18.29■□□□□ 0.52
CLDN12P56749 HOXC-AS1-201ENST00000505700 548 ntTSL 2 BASIC18.29■□□□□ 0.52
CLDN12P56749 AC241377.3-202ENST00000626088 1088 ntBASIC18.29■□□□□ 0.52
CLDN12P56749 AC241585.3-202ENST00000628937 1088 ntBASIC18.29■□□□□ 0.52
CLDN12P56749 AC245100.8-202ENST00000629247 1058 ntBASIC18.29■□□□□ 0.52
CLDN12P56749 HCG18-235ENST00000426882 4862 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
CLDN12P56749 ZNF579-201ENST00000325421 2899 ntAPPRIS P1 TSL 2 BASIC18.29■□□□□ 0.52
CLDN12P56749 PCMT1-205ENST00000464889 1984 ntAPPRIS P3 TSL 1 (best) BASIC18.29■□□□□ 0.52
CLDN12P56749 SDSL-202ENST00000403593 1449 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
CLDN12P56749 FAM107A-203ENST00000447756 1432 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
CLDN12P56749 AC003102.1-202ENST00000563394 1796 ntBASIC18.29■□□□□ 0.52
CLDN12P56749 EML6-201ENST00000356458 8320 ntAPPRIS P1 TSL 5 BASIC18.29■□□□□ 0.52
CLDN12P56749 BAALC-203ENST00000309982 2831 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
CLDN12P56749 HNRNPLL-204ENST00000409328 1908 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
CLDN12P56749 BHLHE22-201ENST00000321870 3262 ntAPPRIS P1 BASIC18.29■□□□□ 0.52
CLDN12P56749 PLEKHF1-204ENST00000592810 1357 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
CLDN12P56749 AC073314.1-201ENST00000568729 2216 ntBASIC18.29■□□□□ 0.52
CLDN12P56749 SHANK1-203ENST00000391813 4785 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
CLDN12P56749 SACM1L-202ENST00000418611 2164 ntTSL 2 BASIC18.28■□□□□ 0.52
CLDN12P56749 NSMF-201ENST00000265663 2981 ntAPPRIS P3 TSL 1 (best) BASIC18.28■□□□□ 0.52
CLDN12P56749 NSMF-206ENST00000371475 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC18.28■□□□□ 0.52
CLDN12P56749 IRF7-201ENST00000330243 1992 ntAPPRIS P4 TSL 5 BASIC18.28■□□□□ 0.52
CLDN12P56749 AC009506.1-201ENST00000418474 1494 ntTSL 2 BASIC18.28■□□□□ 0.52
CLDN12P56749 RBM38-205ENST00000440234 686 ntTSL 2 BASIC18.28■□□□□ 0.52
CLDN12P56749 TMEM170A-202ENST00000561878 1072 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
CLDN12P56749 UBALD1-201ENST00000283474 1413 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
CLDN12P56749 GFRA4-201ENST00000290417 1427 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
CLDN12P56749 FDXR-201ENST00000293195 1875 ntAPPRIS ALT1 TSL 1 (best) BASIC18.28■□□□□ 0.52
CLDN12P56749 NFIB-207ENST00000397579 3129 ntTSL 5 BASIC18.28■□□□□ 0.52
CLDN12P56749 TDRD10-202ENST00000368482 2331 ntAPPRIS P3 TSL 1 (best) BASIC18.28■□□□□ 0.52
CLDN12P56749 TMED4-203ENST00000457408 2322 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
CLDN12P56749 KLC1-208ENST00000452929 2453 ntTSL 5 BASIC18.28■□□□□ 0.52
CLDN12P56749 MFSD3-201ENST00000301327 1548 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
CLDN12P56749 HDGFL2-208ENST00000616600 2281 ntAPPRIS P3 TSL 1 (best) BASIC18.28■□□□□ 0.52
CLDN12P56749 AC007952.6-201ENST00000573168 2673 ntBASIC18.27■□□□□ 0.52
CLDN12P56749 AC003957.1-201ENST00000625108 2673 ntBASIC18.27■□□□□ 0.52
CLDN12P56749 EEF1D-203ENST00000419152 1452 ntAPPRIS ALT2 TSL 5 BASIC18.27■□□□□ 0.52
CLDN12P56749 RAB11FIP4-211ENST00000621161 8628 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
CLDN12P56749 CBWD3-201ENST00000360171 2165 ntAPPRIS P2 TSL 1 (best) BASIC18.27■□□□□ 0.52
CLDN12P56749 WWTR1-AS1-202ENST00000479752 1700 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
CLDN12P56749 PIF1-202ENST00000333425 2278 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
CLDN12P56749 PAXIP1-AS1-201ENST00000608317 2256 ntBASIC18.27■□□□□ 0.52
CLDN12P56749 OSR2-203ENST00000457907 2126 ntTSL 2 BASIC18.27■□□□□ 0.52
CLDN12P56749 FAM173A-207ENST00000569529 1052 ntAPPRIS P3 TSL 1 (best) BASIC18.27■□□□□ 0.52
CLDN12P56749 AC010336.5-201ENST00000594308 317 ntTSL 3 BASIC18.27■□□□□ 0.52
CLDN12P56749 FAM46B-201ENST00000289166 2368 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
CLDN12P56749 TMEM178A-201ENST00000281961 1662 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
CLDN12P56749 AC133555.3-201ENST00000549950 1693 ntAPPRIS P5 TSL 5 BASIC18.27■□□□□ 0.52
CLDN12P56749 AC106782.1-201ENST00000550538 1693 ntAPPRIS P5 TSL 5 BASIC18.27■□□□□ 0.52
CLDN12P56749 LINC01089-202ENST00000429892 1521 ntTSL 1 (best) BASIC18.27■□□□□ 0.51
CLDN12P56749 KCNK6-201ENST00000263372 5722 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
CLDN12P56749 BRD9-202ENST00000467963 2156 ntAPPRIS P1 TSL 2 BASIC18.27■□□□□ 0.51
CLDN12P56749 LEFTY1-201ENST00000272134 1626 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
CLDN12P56749 FAM110A-206ENST00000541082 1614 ntAPPRIS P1 TSL 3 BASIC18.27■□□□□ 0.51
CLDN12P56749 HDAC11-211ENST00000433119 2043 ntTSL 1 (best) BASIC18.27■□□□□ 0.51
CLDN12P56749 RHNO1-204ENST00000489288 1870 ntAPPRIS P3 TSL 1 (best) BASIC18.26■□□□□ 0.51
CLDN12P56749 AC026362.1-201ENST00000540866 5618 ntTSL 2 BASIC18.26■□□□□ 0.51
CLDN12P56749 ILF3-217ENST00000589998 2622 ntTSL 2 BASIC18.26■□□□□ 0.51
CLDN12P56749 PXYLP1-203ENST00000502783 2066 ntTSL 2 BASIC18.26■□□□□ 0.51
CLDN12P56749 SLC35A3-205ENST00000465289 5696 ntAPPRIS P1 TSL 5 BASIC18.26■□□□□ 0.51
CLDN12P56749 NEUROG1-201ENST00000314744 1668 ntAPPRIS P1 BASIC18.26■□□□□ 0.51
CLDN12P56749 ENGASE-205ENST00000579016 2579 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
CLDN12P56749 LRP11-202ENST00000367368 1042 ntTSL 2 BASIC18.26■□□□□ 0.51
CLDN12P56749 BAD-203ENST00000394532 1157 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
CLDN12P56749 AC239859.2-201ENST00000444165 318 ntBASIC18.26■□□□□ 0.51
CLDN12P56749 PLCD1-201ENST00000334661 2769 ntAPPRIS P3 TSL 1 (best) BASIC18.26■□□□□ 0.51
CLDN12P56749 AKR7A2-201ENST00000235835 1362 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
CLDN12P56749 DISC1-202ENST00000317586 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
CLDN12P56749 TPM1-204ENST00000334895 1637 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
CLDN12P56749 EBF1-202ENST00000380654 2345 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
CLDN12P56749 SLC35E4-202ENST00000406566 2081 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
CLDN12P56749 GRINA-202ENST00000395068 1814 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
CLDN12P56749 AFG3L1P-217ENST00000557444 2447 ntBASIC18.25■□□□□ 0.51
CLDN12P56749 TPD52-209ENST00000518937 2856 ntTSL 2 BASIC18.25■□□□□ 0.51
CLDN12P56749 AL158151.1-201ENST00000372490 2047 ntTSL 2 BASIC18.25■□□□□ 0.51
CLDN12P56749 NIPA2-205ENST00000539711 1412 ntTSL 2 BASIC18.25■□□□□ 0.51
CLDN12P56749 LZTS3-201ENST00000329152 5257 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
CLDN12P56749 CAMK2B-207ENST00000358707 1895 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
CLDN12P56749 TTYH1-202ENST00000376530 1885 ntAPPRIS P3 TSL 1 (best) BASIC18.25■□□□□ 0.51
CLDN12P56749 MAP4K4-210ENST00000425019 4403 ntTSL 5 BASIC18.25■□□□□ 0.51
CLDN12P56749 DNAAF3-202ENST00000455045 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
CLDN12P56749 IRF7-205ENST00000397574 1968 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
CLDN12P56749 AP005212.1-201ENST00000581547 1997 ntBASIC18.25■□□□□ 0.51
CLDN12P56749 FAHD1-204ENST00000615972 757 ntTSL 5 BASIC18.25■□□□□ 0.51
CLDN12P56749 QPCT-201ENST00000338415 1739 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
CLDN12P56749 OAS3-205ENST00000548514 1392 ntTSL 2 BASIC18.25■□□□□ 0.51
CLDN12P56749 SCOC-207ENST00000506597 1838 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
CLDN12P56749 TINCR-201ENST00000448587 3733 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
CLDN12P56749 C16orf59-201ENST00000361837 1662 ntAPPRIS P2 TSL 1 (best) BASIC18.25■□□□□ 0.51
CLDN12P56749 APBB3-203ENST00000357560 2218 ntAPPRIS P3 TSL 5 BASIC18.25■□□□□ 0.51
CLDN12P56749 FGFR3-210ENST00000613647 4438 ntTSL 5 BASIC18.24■□□□□ 0.51
CLDN12P56749 HSPB2-201ENST00000304298 1335 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 20.2 ms