Protein–RNA interactions for Protein: P54105

CLNS1A, Methylosome subunit pICln, humanhuman

Known RBP Predictions only

Length 237 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLNS1AP54105 NKIRAS2-209ENST00000479407 992 ntTSL 3 BASIC20.87■□□□□ 0.93
CLNS1AP54105 HOXC-AS1-201ENST00000505700 548 ntTSL 2 BASIC20.87■□□□□ 0.93
CLNS1AP54105 ACOT1-202ENST00000557556 1271 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
CLNS1AP54105 DENND1A-203ENST00000373624 5010 ntAPPRIS P4 TSL 5 BASIC20.87■□□□□ 0.93
CLNS1AP54105 SPOCK3-204ENST00000502330 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.93
CLNS1AP54105 PLPP7-202ENST00000372264 2095 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
CLNS1AP54105 INPP5J-203ENST00000401755 1751 ntTSL 2 BASIC20.87■□□□□ 0.93
CLNS1AP54105 IDH2-202ENST00000540499 1453 ntTSL 2 BASIC20.87■□□□□ 0.93
CLNS1AP54105 RFXAP-201ENST00000255476 2304 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
CLNS1AP54105 ZNF773-204ENST00000598770 2019 ntAPPRIS ALT2 TSL 2 BASIC20.87■□□□□ 0.93
CLNS1AP54105 SIRT7-201ENST00000328666 1743 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
CLNS1AP54105 TBC1D22A-206ENST00000407381 1949 ntTSL 5 BASIC20.86■□□□□ 0.93
CLNS1AP54105 SIMC1-204ENST00000430704 1925 ntAPPRIS P3 TSL 2 BASIC20.86■□□□□ 0.93
CLNS1AP54105 NTRK3-206ENST00000540489 2145 ntTSL 5 BASIC20.86■□□□□ 0.93
CLNS1AP54105 KCNS2-201ENST00000287042 5219 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
CLNS1AP54105 ST3GAL4-215ENST00000532243 1825 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
CLNS1AP54105 SYCE1-204ENST00000432597 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC20.86■□□□□ 0.93
CLNS1AP54105 RAET1E-AS1-203ENST00000606915 1210 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
CLNS1AP54105 AC010997.5-201ENST00000609182 354 ntBASIC20.86■□□□□ 0.93
CLNS1AP54105 C17orf82-201ENST00000623772 1530 ntBASIC20.86■□□□□ 0.93
CLNS1AP54105 RAB1A-204ENST00000409892 2254 ntTSL 2 BASIC20.86■□□□□ 0.93
CLNS1AP54105 SLC29A4-202ENST00000396872 5685 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
CLNS1AP54105 CCNG2-204ENST00000502280 1459 ntAPPRIS P1 TSL 2 BASIC20.86■□□□□ 0.93
CLNS1AP54105 TRABD-201ENST00000303434 2329 ntAPPRIS P3 TSL 1 (best) BASIC20.86■□□□□ 0.93
CLNS1AP54105 ZNF213-202ENST00000416391 2996 ntAPPRIS P1 TSL 5 BASIC20.85■□□□□ 0.93
CLNS1AP54105 PAQR6-213ENST00000612424 2037 ntTSL 2 BASIC20.85■□□□□ 0.93
CLNS1AP54105 CHN1-203ENST00000409156 1761 ntTSL 2 BASIC20.85■□□□□ 0.93
CLNS1AP54105 MID2-201ENST00000262843 2876 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
CLNS1AP54105 MDK-203ENST00000395566 828 ntAPPRIS P2 TSL 1 (best) BASIC20.85■□□□□ 0.93
CLNS1AP54105 HES6-204ENST00000409182 863 ntTSL 2 BASIC20.85■□□□□ 0.93
CLNS1AP54105 NEURL1B-203ENST00000522853 1263 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
CLNS1AP54105 AC133065.2-201ENST00000573379 2147 ntTSL 2 BASIC20.85■□□□□ 0.93
CLNS1AP54105 CA15P2-201ENST00000611168 834 ntBASIC20.85■□□□□ 0.93
CLNS1AP54105 TSNAXIP1-202ENST00000415766 2338 ntAPPRIS ALT2 TSL 2 BASIC20.85■□□□□ 0.93
CLNS1AP54105 PSMD7-201ENST00000219313 1670 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
CLNS1AP54105 FAHD1-201ENST00000382666 1964 ntTSL 2 BASIC20.85■□□□□ 0.93
CLNS1AP54105 FUS-210ENST00000568685 1785 ntAPPRIS ALT2 TSL 5 BASIC20.85■□□□□ 0.93
CLNS1AP54105 LAYN-209ENST00000533265 1703 ntTSL 5 BASIC20.84■□□□□ 0.93
CLNS1AP54105 ITPKB-202ENST00000366784 3146 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
CLNS1AP54105 VGF-203ENST00000611537 1622 ntTSL 5 BASIC20.84■□□□□ 0.93
CLNS1AP54105 IRF7-201ENST00000330243 1992 ntAPPRIS P4 TSL 5 BASIC20.84■□□□□ 0.93
CLNS1AP54105 AC090377.1-201ENST00000585691 1762 ntTSL 3 BASIC20.84■□□□□ 0.93
CLNS1AP54105 RFLNA-201ENST00000324038 2148 ntAPPRIS P2 TSL 2 BASIC20.84■□□□□ 0.93
CLNS1AP54105 CCDC151-201ENST00000356392 2107 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
CLNS1AP54105 TMUB1-201ENST00000297533 1353 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
CLNS1AP54105 BLCAP-208ENST00000414542 2205 ntAPPRIS P1 TSL 3 BASIC20.84■□□□□ 0.93
CLNS1AP54105 ZDHHC20-203ENST00000400590 1869 ntAPPRIS ALT2 TSL 5 BASIC20.84■□□□□ 0.93
CLNS1AP54105 EPCAM-202ENST00000405271 1530 ntTSL 5 BASIC20.83■□□□□ 0.93
CLNS1AP54105 CDK13-202ENST00000340829 5066 ntAPPRIS ALT1 TSL 1 (best) BASIC20.83■□□□□ 0.93
CLNS1AP54105 PDCD2-204ENST00000453163 2657 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
CLNS1AP54105 PRSS12-201ENST00000296498 4809 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
CLNS1AP54105 C16orf58-209ENST00000567994 1845 ntTSL 5 BASIC20.83■□□□□ 0.93
CLNS1AP54105 NPY4R-201ENST00000374312 1956 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
CLNS1AP54105 NPY4R2-201ENST00000576178 1956 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
CLNS1AP54105 IGLON5-201ENST00000270642 2606 ntAPPRIS P1 TSL 5 BASIC20.83■□□□□ 0.93
CLNS1AP54105 MRPS2-202ENST00000371785 1640 ntAPPRIS P1 TSL 3 BASIC20.83■□□□□ 0.93
CLNS1AP54105 FAM69B-201ENST00000371691 2410 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
CLNS1AP54105 GTF3C5-202ENST00000372097 2406 ntAPPRIS P3 TSL 1 (best) BASIC20.83■□□□□ 0.93
CLNS1AP54105 MIR222HG-202ENST00000602507 1758 ntTSL 5 BASIC20.83■□□□□ 0.93
CLNS1AP54105 RGMB-207ENST00000513185 2052 ntAPPRIS ALT2 TSL 2 BASIC20.83■□□□□ 0.93
CLNS1AP54105 PYCARD-201ENST00000247470 990 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
CLNS1AP54105 LRP11-202ENST00000367368 1042 ntTSL 2 BASIC20.83■□□□□ 0.93
CLNS1AP54105 RPL31-208ENST00000409733 825 ntAPPRIS P3 TSL 1 (best) BASIC20.83■□□□□ 0.93
CLNS1AP54105 PRELID1-203ENST00000503216 1171 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
CLNS1AP54105 GRAMD2B-219ENST00000544396 2822 ntTSL 2 BASIC20.83■□□□□ 0.92
CLNS1AP54105 CMTM3-201ENST00000361909 2159 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
CLNS1AP54105 LETM1P2-201ENST00000597330 2178 ntBASIC20.83■□□□□ 0.92
CLNS1AP54105 BID-215ENST00000622694 2199 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
CLNS1AP54105 CSPG5-202ENST00000383738 4161 ntAPPRIS ALT2 TSL 1 (best) BASIC20.83■□□□□ 0.92
CLNS1AP54105 CASP9-203ENST00000375890 1351 ntTSL 2 BASIC20.83■□□□□ 0.92
CLNS1AP54105 MADCAM1-205ENST00000613880 1509 ntAPPRIS ALT2 TSL 5 BASIC20.83■□□□□ 0.92
CLNS1AP54105 RBMS1-205ENST00000409972 1815 ntTSL 5 BASIC20.83■□□□□ 0.92
CLNS1AP54105 FAM91A1-201ENST00000334705 5511 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
CLNS1AP54105 SOX2-201ENST00000325404 2513 ntAPPRIS P1 BASIC20.82■□□□□ 0.92
CLNS1AP54105 GPR6-202ENST00000414000 1945 ntTSL 2 BASIC20.82■□□□□ 0.92
CLNS1AP54105 KMT5B-206ENST00000405515 2869 ntTSL 5 BASIC20.82■□□□□ 0.92
CLNS1AP54105 KCNQ5-202ENST00000355194 6566 ntAPPRIS ALT1 TSL 5 BASIC20.82■□□□□ 0.92
CLNS1AP54105 KCNQ5-206ENST00000402622 6596 ntAPPRIS ALT2 TSL 5 BASIC20.82■□□□□ 0.92
CLNS1AP54105 RBPMS-209ENST00000520161 842 ntTSL 2 BASIC20.82■□□□□ 0.92
CLNS1AP54105 HIBADH-201ENST00000265395 1990 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
CLNS1AP54105 TRPV3-209ENST00000576742 2766 ntAPPRIS P3 TSL 1 (best) BASIC20.82■□□□□ 0.92
CLNS1AP54105 LAPTM4B-204ENST00000619747 2758 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
CLNS1AP54105 WDR86-207ENST00000621812 1542 ntTSL 5 BASIC20.82■□□□□ 0.92
CLNS1AP54105 CAMK2N2-201ENST00000296238 1362 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
CLNS1AP54105 CLDN15-201ENST00000308344 1370 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
CLNS1AP54105 FAM129C-207ENST00000599124 1918 ntAPPRIS ALT2 TSL 1 (best) BASIC20.82■□□□□ 0.92
CLNS1AP54105 FGFR2-204ENST00000356226 3547 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
CLNS1AP54105 C14orf80-206ENST00000392527 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
CLNS1AP54105 FOLH1-203ENST00000343844 2258 ntTSL 2 BASIC20.81■□□□□ 0.92
CLNS1AP54105 STMN4-202ENST00000350889 2288 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
CLNS1AP54105 ACSS3-201ENST00000261206 2666 ntAPPRIS ALT1 TSL 1 (best) BASIC20.81■□□□□ 0.92
CLNS1AP54105 TMEM206-205ENST00000535273 2119 ntTSL 2 BASIC20.81■□□□□ 0.92
CLNS1AP54105 BTBD17-201ENST00000375366 1805 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
CLNS1AP54105 IGFBP1-201ENST00000275525 1653 ntAPPRIS P2 TSL 1 (best) BASIC20.81■□□□□ 0.92
CLNS1AP54105 AC239859.2-201ENST00000444165 318 ntBASIC20.81■□□□□ 0.92
CLNS1AP54105 TBC1D4-201ENST00000377625 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
CLNS1AP54105 FBXO41-204ENST00000520530 3293 ntAPPRIS P1 TSL 5 BASIC20.81■□□□□ 0.92
CLNS1AP54105 AC254629.1-202ENST00000618276 2112 ntTSL 2 BASIC20.81■□□□□ 0.92
CLNS1AP54105 SCAND1-202ENST00000373991 1727 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
CLNS1AP54105 RMI2-201ENST00000312499 1457 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Retrieved 100 of 98,524 protein–RNA pairs in 28.7 ms