Protein–RNA interactions for Protein: P53384

NUBP1, Cytosolic Fe-S cluster assembly factor NUBP1, humanhuman

Predictions only

Length 320 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUBP1P53384 ARNTL2-209ENST00000546179 1861 ntAPPRIS ALT2 TSL 2 BASIC21.2■□□□□ 0.98
NUBP1P53384 DPF1-209ENST00000456296 1562 ntAPPRIS P1 TSL 5 BASIC21.2■□□□□ 0.98
NUBP1P53384 GTPBP3-202ENST00000358792 1951 ntAPPRIS P4 TSL 2 BASIC21.2■□□□□ 0.98
NUBP1P53384 REXO2-201ENST00000265881 1161 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
NUBP1P53384 WDR74-201ENST00000278856 1289 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
NUBP1P53384 NTAN1-201ENST00000287706 1204 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
NUBP1P53384 PTCRA-201ENST00000304672 1080 ntAPPRIS P3 TSL 1 (best) BASIC21.2■□□□□ 0.98
NUBP1P53384 FDX2-202ENST00000393708 1012 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
NUBP1P53384 TSPAN4-209ENST00000409543 1031 ntAPPRIS P1 TSL 5 BASIC21.2■□□□□ 0.98
NUBP1P53384 AC099329.3-201ENST00000431549 602 ntAPPRIS P1 TSL 4 BASIC21.2■□□□□ 0.98
NUBP1P53384 PTCRA-202ENST00000441198 1005 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
NUBP1P53384 PTCRA-203ENST00000446507 759 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
NUBP1P53384 REXO2-208ENST00000539754 791 ntTSL 2 BASIC21.2■□□□□ 0.98
NUBP1P53384 SLC25A11-202ENST00000544061 952 ntTSL 3 BASIC21.2■□□□□ 0.98
NUBP1P53384 REXO2-216ENST00000544196 452 ntTSL 3 BASIC21.2■□□□□ 0.98
NUBP1P53384 CMTM3-207ENST00000564060 824 ntTSL 2 BASIC21.2■□□□□ 0.98
NUBP1P53384 CMTM3-211ENST00000565922 615 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
NUBP1P53384 MRPL4-202ENST00000307422 1320 ntAPPRIS P2 TSL 5 BASIC21.2■□□□□ 0.98
NUBP1P53384 SPAG16-209ENST00000447990 1330 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
NUBP1P53384 GLT8D2-205ENST00000548660 1835 ntAPPRIS P1 TSL 2 BASIC21.2■□□□□ 0.98
NUBP1P53384 CTBP1-201ENST00000290921 2297 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
NUBP1P53384 TMEM9-201ENST00000367330 1959 ntAPPRIS P3 TSL 1 (best) BASIC21.19■□□□□ 0.98
NUBP1P53384 TGIF1-207ENST00000407501 1585 ntAPPRIS P1 TSL 3 BASIC21.19■□□□□ 0.98
NUBP1P53384 ST3GAL4-202ENST00000356132 1745 ntTSL 5 BASIC21.19■□□□□ 0.98
NUBP1P53384 HEXDC-202ENST00000337014 2285 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
NUBP1P53384 S100A14-203ENST00000368701 1080 ntAPPRIS P1 TSL 2 BASIC21.19■□□□□ 0.98
NUBP1P53384 LST1-205ENST00000376089 680 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
NUBP1P53384 LST1-206ENST00000376090 689 ntTSL 2 BASIC21.19■□□□□ 0.98
NUBP1P53384 LST1-208ENST00000376093 648 ntAPPRIS ALT2 TSL 1 (best) BASIC21.19■□□□□ 0.98
NUBP1P53384 LST1-209ENST00000376096 565 ntTSL 2 BASIC21.19■□□□□ 0.98
NUBP1P53384 LST1-210ENST00000376099 610 ntTSL 2 BASIC21.19■□□□□ 0.98
NUBP1P53384 LST1-212ENST00000396101 459 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
NUBP1P53384 LST1-214ENST00000418507 726 ntTSL 2 BASIC21.19■□□□□ 0.98
NUBP1P53384 LST1-217ENST00000438075 764 ntAPPRIS P3 TSL 1 (best) BASIC21.19■□□□□ 0.98
NUBP1P53384 FADD-201ENST00000301838 1841 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
NUBP1P53384 CDK6-202ENST00000424848 1465 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
NUBP1P53384 C2orf50-202ENST00000405022 980 ntAPPRIS P1 TSL 2 BASIC21.18■□□□□ 0.98
NUBP1P53384 THAP6-213ENST00000514480 1161 ntAPPRIS P3 TSL 1 (best) BASIC21.18■□□□□ 0.98
NUBP1P53384 RN7SL850P-201ENST00000579959 291 ntBASIC21.18■□□□□ 0.98
NUBP1P53384 AC092865.7-201ENST00000641832 219 ntBASIC21.18■□□□□ 0.98
NUBP1P53384 RNASET2-203ENST00000366855 1417 ntTSL 5 BASIC21.18■□□□□ 0.98
NUBP1P53384 AP006587.3-201ENST00000525742 1516 ntBASIC21.18■□□□□ 0.98
NUBP1P53384 CNTD2-202ENST00000430325 1817 ntAPPRIS P2 TSL 2 BASIC21.18■□□□□ 0.98
NUBP1P53384 PTX3-201ENST00000295927 1940 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
NUBP1P53384 SLC22A31-201ENST00000562855 1909 ntAPPRIS P1 TSL 5 BASIC21.17■□□□□ 0.98
NUBP1P53384 BSX-201ENST00000343035 830 ntAPPRIS P1 TSL 5 BASIC21.17■□□□□ 0.98
NUBP1P53384 RNF135-204ENST00000443677 1261 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
NUBP1P53384 AL590666.2-201ENST00000448869 758 ntTSL 2 BASIC21.17■□□□□ 0.98
NUBP1P53384 TMEM72-203ENST00000544540 1018 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
NUBP1P53384 BCL2L10-202ENST00000561198 825 ntAPPRIS ALT2 TSL 1 (best) BASIC21.17■□□□□ 0.98
NUBP1P53384 LACTBL1-201ENST00000426928 1641 ntAPPRIS P5 TSL 5 BASIC21.17■□□□□ 0.98
NUBP1P53384 RTN2-208ENST00000590526 2357 ntTSL 5 BASIC21.17■□□□□ 0.98
NUBP1P53384 CAPN10-208ENST00000404753 2570 ntAPPRIS ALT2 TSL 5 BASIC21.17■□□□□ 0.98
NUBP1P53384 H2AFX-202ENST00000530167 1614 ntAPPRIS P1 BASIC21.16■□□□□ 0.98
NUBP1P53384 AC233992.2-201ENST00000531225 1596 ntAPPRIS P1 TSL 2 BASIC21.16■□□□□ 0.98
NUBP1P53384 DTD1-201ENST00000377452 1387 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
NUBP1P53384 AC027031.2-201ENST00000521369 1318 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
NUBP1P53384 CLTA-202ENST00000345519 1073 ntAPPRIS ALT1 TSL 1 (best) BASIC21.16■□□□□ 0.98
NUBP1P53384 TMSB4X-201ENST00000380633 495 ntAPPRIS P1 TSL 3 BASIC21.16■□□□□ 0.98
NUBP1P53384 ACP1-205ENST00000407983 703 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
NUBP1P53384 ANKRD54-204ENST00000411961 946 ntTSL 5 BASIC21.16■□□□□ 0.98
NUBP1P53384 SMIM19-201ENST00000414154 793 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
NUBP1P53384 SLC29A4P2-201ENST00000504749 1089 ntBASIC21.16■□□□□ 0.98
NUBP1P53384 AC020922.2-201ENST00000596786 359 ntTSL 4 BASIC21.16■□□□□ 0.98
NUBP1P53384 PCSK6-216ENST00000615296 2921 ntTSL 5 BASIC21.15■□□□□ 0.98
NUBP1P53384 CD247-201ENST00000362089 1609 ntAPPRIS P4 TSL 1 (best) BASIC21.15■□□□□ 0.98
NUBP1P53384 AC007743.1-203ENST00000447423 1623 ntTSL 2 BASIC21.15■□□□□ 0.98
NUBP1P53384 SLC1A7-201ENST00000371491 1306 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
NUBP1P53384 AL355472.2-201ENST00000422958 438 ntBASIC21.15■□□□□ 0.98
NUBP1P53384 MAGI2-AS3-203ENST00000424477 520 ntTSL 4 BASIC21.15■□□□□ 0.98
NUBP1P53384 AC073316.3-201ENST00000437354 982 ntTSL 3 BASIC21.15■□□□□ 0.98
NUBP1P53384 AC092849.2-201ENST00000492523 333 ntTSL 3 BASIC21.15■□□□□ 0.98
NUBP1P53384 FBXO17-202ENST00000595329 1299 ntAPPRIS P1 TSL 2 BASIC21.15■□□□□ 0.98
NUBP1P53384 APOC3-205ENST00000630701 541 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
NUBP1P53384 DOK3-205ENST00000501403 1872 ntAPPRIS P1 TSL 5 BASIC21.15■□□□□ 0.98
NUBP1P53384 CCDC47-204ENST00000582252 1719 ntTSL 2 BASIC21.15■□□□□ 0.98
NUBP1P53384 CBWD3-202ENST00000377342 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC21.15■□□□□ 0.98
NUBP1P53384 GAL3ST4-204ENST00000423751 1695 ntTSL 3 BASIC21.15■□□□□ 0.98
NUBP1P53384 FOXG1-201ENST00000313071 4890 ntAPPRIS P1 BASIC21.15■□□□□ 0.98
NUBP1P53384 ZNF775-201ENST00000329630 2257 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
NUBP1P53384 SCAMP3-202ENST00000355379 1537 ntTSL 1 (best) BASIC21.14■□□□□ 0.98
NUBP1P53384 ACTL10-201ENST00000330271 2028 ntAPPRIS P1 BASIC21.14■□□□□ 0.98
NUBP1P53384 AC145676.1-201ENST00000514988 2004 ntBASIC21.14■□□□□ 0.98
NUBP1P53384 PRSS57-201ENST00000329267 1025 ntAPPRIS ALT2 TSL 1 (best) BASIC21.14■□□□□ 0.97
NUBP1P53384 DMRT2-206ENST00000412350 1244 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
NUBP1P53384 HES2-205ENST00000487437 968 ntTSL 3 BASIC21.14■□□□□ 0.97
NUBP1P53384 AC106791.1-202ENST00000508281 1148 ntTSL 2 BASIC21.14■□□□□ 0.97
NUBP1P53384 SLC39A11-207ENST00000579732 1004 ntTSL 2 BASIC21.14■□□□□ 0.97
NUBP1P53384 TNNT1-208ENST00000587465 1065 ntAPPRIS ALT2 TSL 5 BASIC21.14■□□□□ 0.97
NUBP1P53384 ATRAID-208ENST00000611786 1256 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
NUBP1P53384 PRSS57-202ENST00000613411 1090 ntAPPRIS P3 TSL 1 (best) BASIC21.14■□□□□ 0.97
NUBP1P53384 SMN1-211ENST00000625245 885 ntAPPRIS ALT2 TSL 5 BASIC21.14■□□□□ 0.97
NUBP1P53384 SMN2-215ENST00000628696 885 ntAPPRIS ALT2 TSL 5 BASIC21.14■□□□□ 0.97
NUBP1P53384 COG8-201ENST00000562081 1731 ntAPPRIS P1 TSL 5 BASIC21.14■□□□□ 0.97
NUBP1P53384 FAM181A-204ENST00000557000 1652 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
NUBP1P53384 NTSR2-201ENST00000306928 1569 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
NUBP1P53384 TRABD2A-203ENST00000409520 1975 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
NUBP1P53384 ZDHHC24-203ENST00000526986 1424 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
NUBP1P53384 OR7E47P-201ENST00000546390 1422 ntBASIC21.13■□□□□ 0.97
NUBP1P53384 FPGS-221ENST00000630236 2160 ntTSL 5 BASIC21.13■□□□□ 0.97
Retrieved 100 of 98,524 protein–RNA pairs in 21.5 ms