Protein–RNA interactions for Protein: P52435

POLR2J, DNA-directed RNA polymerase II subunit RPB11-a, humanhuman

Known RBP Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2JP52435 CHRNA10-204ENST00000534359 1474 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
POLR2JP52435 ENKD1-206ENST00000602644 1353 ntTSL 5 BASIC20.14■□□□□ 0.81
POLR2JP52435 ACP4-201ENST00000270593 1347 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
POLR2JP52435 P2RX2-205ENST00000352418 1200 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
POLR2JP52435 YJEFN3-201ENST00000436027 878 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
POLR2JP52435 Z97653.1-201ENST00000567096 446 ntTSL 3 BASIC20.14■□□□□ 0.81
POLR2JP52435 SRR-208ENST00000576848 588 ntTSL 4 BASIC20.14■□□□□ 0.81
POLR2JP52435 HGH1-201ENST00000347708 2531 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
POLR2JP52435 MATR3-206ENST00000503811 2518 ntTSL 2 BASIC20.14■□□□□ 0.81
POLR2JP52435 PRMT8-202ENST00000382622 2366 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
POLR2JP52435 FBLN5-202ENST00000342058 2123 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
POLR2JP52435 ASCL5-201ENST00000449188 2026 ntAPPRIS P1 TSL 3 BASIC20.14■□□□□ 0.81
POLR2JP52435 DENND6A-201ENST00000311128 4655 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
POLR2JP52435 TMEM178A-201ENST00000281961 1662 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
POLR2JP52435 GNB1L-202ENST00000403325 1699 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
POLR2JP52435 RELT-202ENST00000393580 2669 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
POLR2JP52435 FAM3C-201ENST00000359943 2508 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
POLR2JP52435 MAP3K21-203ENST00000366624 5809 ntAPPRIS P2 TSL 1 (best) BASIC20.13■□□□□ 0.81
POLR2JP52435 EMC9-201ENST00000216799 835 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
POLR2JP52435 RTL8C-201ENST00000257013 1181 ntAPPRIS P1 BASIC20.13■□□□□ 0.81
POLR2JP52435 C12orf43-208ENST00000539736 1033 ntAPPRIS ALT2 TSL 2 BASIC20.13■□□□□ 0.81
POLR2JP52435 FAM228B-208ENST00000613899 1238 ntAPPRIS ALT2 TSL 1 (best) BASIC20.13■□□□□ 0.81
POLR2JP52435 AC011298.3-201ENST00000615796 283 ntBASIC20.13■□□□□ 0.81
POLR2JP52435 ADGRA3-204ENST00000502482 2870 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
POLR2JP52435 IRF7-204ENST00000397570 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC20.13■□□□□ 0.81
POLR2JP52435 ME2-202ENST00000382927 2492 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
POLR2JP52435 NEUROG1-201ENST00000314744 1668 ntAPPRIS P1 BASIC20.13■□□□□ 0.81
POLR2JP52435 ARL6IP4-220ENST00000543566 1591 ntAPPRIS ALT2 TSL 1 (best) BASIC20.12■□□□□ 0.81
POLR2JP52435 RNF32-207ENST00000405335 1938 ntAPPRIS P1 TSL 5 BASIC20.12■□□□□ 0.81
POLR2JP52435 SLC17A7-201ENST00000221485 2973 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
POLR2JP52435 GFI1-202ENST00000370332 2855 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
POLR2JP52435 RNF208-201ENST00000391553 1077 ntAPPRIS P1 BASIC20.12■□□□□ 0.81
POLR2JP52435 AC061979.1-201ENST00000532061 434 ntTSL 5 BASIC20.12■□□□□ 0.81
POLR2JP52435 GALNS-211ENST00000568311 703 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
POLR2JP52435 SAP25-203ENST00000614631 987 ntAPPRIS P2 TSL 2 BASIC20.12■□□□□ 0.81
POLR2JP52435 OSR2-203ENST00000457907 2126 ntTSL 2 BASIC20.12■□□□□ 0.81
POLR2JP52435 NTRK3-206ENST00000540489 2145 ntTSL 5 BASIC20.12■□□□□ 0.81
POLR2JP52435 HLA-DPB1-211ENST00000418931 1560 ntAPPRIS P2 BASIC20.12■□□□□ 0.81
POLR2JP52435 ZNF773-204ENST00000598770 2019 ntAPPRIS ALT2 TSL 2 BASIC20.12■□□□□ 0.81
POLR2JP52435 TMEM204-202ENST00000566264 1938 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
POLR2JP52435 NDOR1-201ENST00000344894 1794 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
POLR2JP52435 ZNF800-208ENST00000619291 2099 ntTSL 5 BASIC20.11■□□□□ 0.81
POLR2JP52435 TNFRSF25-201ENST00000348333 1119 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
POLR2JP52435 TNFRSF25-202ENST00000351748 705 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
POLR2JP52435 MCRIP1-204ENST00000570507 765 ntTSL 2 BASIC20.11■□□□□ 0.81
POLR2JP52435 MCRIP1-208ENST00000575061 618 ntTSL 5 BASIC20.11■□□□□ 0.81
POLR2JP52435 HAUS7-211ENST00000626181 414 ntAPPRIS ALT2 TSL 5 BASIC20.11■□□□□ 0.81
POLR2JP52435 ST3GAL4-209ENST00000526727 1967 ntAPPRIS ALT1 TSL 1 (best) BASIC20.11■□□□□ 0.81
POLR2JP52435 NAAA-201ENST00000286733 1900 ntAPPRIS P2 TSL 5 BASIC20.11■□□□□ 0.81
POLR2JP52435 SNUPN-205ENST00000564644 1931 ntAPPRIS P1 TSL 2 BASIC20.11■□□□□ 0.81
POLR2JP52435 PPP1CC-201ENST00000335007 2559 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
POLR2JP52435 POMGNT2-201ENST00000344697 2544 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
POLR2JP52435 PKMYT1-201ENST00000262300 2171 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
POLR2JP52435 SCOC-207ENST00000506597 1838 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
POLR2JP52435 NARF-205ENST00000412079 1760 ntTSL 5 BASIC20.11■□□□□ 0.81
POLR2JP52435 EIPR1-206ENST00000443925 1771 ntTSL 3 BASIC20.11■□□□□ 0.81
POLR2JP52435 C17orf67-201ENST00000397861 2013 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
POLR2JP52435 HDAC11-211ENST00000433119 2043 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
POLR2JP52435 ME2-216ENST00000639850 2331 ntTSL 5 BASIC20.1■□□□□ 0.81
POLR2JP52435 FAM69B-202ENST00000371692 1668 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
POLR2JP52435 ARSA-205ENST00000453344 1650 ntTSL 2 BASIC20.1■□□□□ 0.81
POLR2JP52435 AC006128.1-201ENST00000624704 1661 ntBASIC20.1■□□□□ 0.81
POLR2JP52435 SP9-201ENST00000394967 2554 ntAPPRIS P1 TSL 5 BASIC20.1■□□□□ 0.81
POLR2JP52435 RCN1-201ENST00000054950 2572 ntAPPRIS P2 TSL 1 (best) BASIC20.1■□□□□ 0.81
POLR2JP52435 GMPPA-205ENST00000373917 1630 ntTSL 5 BASIC20.1■□□□□ 0.81
POLR2JP52435 SOX21-201ENST00000376945 2778 ntAPPRIS P1 BASIC20.1■□□□□ 0.81
POLR2JP52435 FADS6-203ENST00000612771 2154 ntAPPRIS P2 TSL 1 (best) BASIC20.1■□□□□ 0.81
POLR2JP52435 C4orf36-201ENST00000295898 881 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
POLR2JP52435 RPP21-222ENST00000433076 577 ntTSL 2 BASIC20.1■□□□□ 0.81
POLR2JP52435 TRIR-205ENST00000592273 783 ntTSL 3 BASIC20.1■□□□□ 0.81
POLR2JP52435 LINC01881-206ENST00000614114 957 ntTSL 2 BASIC20.1■□□□□ 0.81
POLR2JP52435 DDIT4-201ENST00000307365 1748 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
POLR2JP52435 BRSK2-208ENST00000528841 3586 ntAPPRIS ALT2 TSL 1 (best) BASIC20.1■□□□□ 0.81
POLR2JP52435 TMEM62-201ENST00000260403 2771 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
POLR2JP52435 RDX-202ENST00000405097 2761 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
POLR2JP52435 RNF38-205ENST00000377877 1974 ntTSL 2 BASIC20.1■□□□□ 0.81
POLR2JP52435 SACM1L-202ENST00000418611 2164 ntTSL 2 BASIC20.1■□□□□ 0.81
POLR2JP52435 NUDT11-201ENST00000375992 2385 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
POLR2JP52435 ZNF517-207ENST00000531720 1615 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
POLR2JP52435 WNT10A-201ENST00000258411 2547 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
POLR2JP52435 CACNA1B-201ENST00000277549 7158 ntAPPRIS ALT2 TSL 1 (best) BASIC20.09■□□□□ 0.81
POLR2JP52435 CACNA1B-202ENST00000277551 7158 ntAPPRIS ALT2 TSL 5 BASIC20.09■□□□□ 0.81
POLR2JP52435 C9orf47-202ENST00000375850 859 ntAPPRIS ALT2 TSL 3 BASIC20.09■□□□□ 0.81
POLR2JP52435 STOX1-202ENST00000399162 935 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
POLR2JP52435 STOX1-203ENST00000399165 1135 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
POLR2JP52435 CDKN2A-207ENST00000497750 565 ntTSL 4 BASIC20.09■□□□□ 0.81
POLR2JP52435 AC004707.1-201ENST00000511627 715 ntTSL 3 BASIC20.09■□□□□ 0.81
POLR2JP52435 CDKN2A-212ENST00000578845 678 ntTSL 2 BASIC20.09■□□□□ 0.81
POLR2JP52435 MIR4466-201ENST00000606121 54 ntBASIC20.09■□□□□ 0.81
POLR2JP52435 SF1-220ENST00000626028 704 ntTSL 2 BASIC20.09■□□□□ 0.81
POLR2JP52435 FAM151B-201ENST00000282226 1717 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
POLR2JP52435 FBXL15-202ENST00000369956 2344 ntAPPRIS ALT1 TSL 1 (best) BASIC20.09■□□□□ 0.81
POLR2JP52435 AC007128.1-201ENST00000424460 1853 ntTSL 5 BASIC20.09■□□□□ 0.81
POLR2JP52435 KRTAP5-7-201ENST00000398536 1408 ntAPPRIS P1 BASIC20.09■□□□□ 0.81
POLR2JP52435 AC079328.2-202ENST00000560903 1410 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
POLR2JP52435 SPATS2L-204ENST00000409140 2463 ntAPPRIS P1 TSL 2 BASIC20.09■□□□□ 0.81
POLR2JP52435 TUBGCP3-204ENST00000464139 2461 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
POLR2JP52435 TRIM15-210ENST00000619857 2217 ntTSL 5 BASIC20.08■□□□□ 0.81
POLR2JP52435 PLEKHA8-203ENST00000396259 2840 ntTSL 2 BASIC20.08■□□□□ 0.81
POLR2JP52435 SHOX2-203ENST00000441443 3038 ntAPPRIS ALT2 TSL 5 BASIC20.08■□□□□ 0.81
Retrieved 100 of 98,524 protein–RNA pairs in 24.3 ms