Protein–RNA interactions for Protein: P51571

SSR4, Translocon-associated protein subunit delta, humanhuman

Predictions only

Length 173 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSR4P51571 AGAP1-IT1-201ENST00000440498 664 ntTSL 3 BASIC19.39■□□□□ 0.69
SSR4P51571 GNAO1-211ENST00000570235 568 ntTSL 2 BASIC19.39■□□□□ 0.69
SSR4P51571 AL136982.7-201ENST00000609363 465 ntTSL 4 BASIC19.39■□□□□ 0.69
SSR4P51571 APOC3-205ENST00000630701 541 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
SSR4P51571 MIF4GD-202ENST00000325102 1306 ntAPPRIS P1 TSL 2 BASIC19.39■□□□□ 0.69
SSR4P51571 KRT16P2-201ENST00000414673 1423 ntBASIC19.39■□□□□ 0.69
SSR4P51571 SMARCD2-201ENST00000225742 1800 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
SSR4P51571 RNF39-201ENST00000244360 2206 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
SSR4P51571 SH3D19-211ENST00000604030 5228 ntTSL 5 BASIC19.38■□□□□ 0.69
SSR4P51571 NIPSNAP1-201ENST00000216121 2237 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
SSR4P51571 SMPD2-201ENST00000258052 1645 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
SSR4P51571 C1QL3-201ENST00000298943 2493 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
SSR4P51571 LETM1-201ENST00000302787 5462 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
SSR4P51571 ACAA1-202ENST00000333167 1785 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
SSR4P51571 ZNF444-201ENST00000337080 2042 ntAPPRIS P3 TSL 1 (best) BASIC19.38■□□□□ 0.69
SSR4P51571 ID1-201ENST00000376105 1233 ntBASIC19.38■□□□□ 0.69
SSR4P51571 PGPEP1L-201ENST00000378919 995 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
SSR4P51571 MIR663A-201ENST00000385250 93 ntBASIC19.38■□□□□ 0.69
SSR4P51571 GSG1L-202ENST00000395724 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
SSR4P51571 ZSWIM7-201ENST00000399277 2008 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
SSR4P51571 TPRN-202ENST00000409012 2718 ntAPPRIS P2 TSL 1 (best) BASIC19.38■□□□□ 0.69
SSR4P51571 CROCCP5-201ENST00000436658 830 ntBASIC19.38■□□□□ 0.69
SSR4P51571 B4GALNT1-203ENST00000449184 1633 ntTSL 2 BASIC19.38■□□□□ 0.69
SSR4P51571 AC021660.2-201ENST00000502999 388 ntTSL 3 BASIC19.38■□□□□ 0.69
SSR4P51571 NDUFS3-207ENST00000529276 558 ntTSL 2 BASIC19.38■□□□□ 0.69
SSR4P51571 GCH1-206ENST00000543643 1897 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
SSR4P51571 NEK6-214ENST00000545174 2573 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
SSR4P51571 PML-217ENST00000567543 1404 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
SSR4P51571 ANAPC11-219ENST00000583839 499 ntAPPRIS P1 TSL 2 BASIC19.38■□□□□ 0.69
SSR4P51571 PARD6A-203ENST00000602551 1171 ntTSL 5 BASIC19.38■□□□□ 0.69
SSR4P51571 KAT5-201ENST00000341318 2296 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
SSR4P51571 PGAM5-204ENST00000543955 1773 ntTSL 2 BASIC19.37■□□□□ 0.69
SSR4P51571 TNIP2-203ENST00000503235 1653 ntTSL 3 BASIC19.37■□□□□ 0.69
SSR4P51571 VPS13B-204ENST00000441350 1626 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
SSR4P51571 HAUS4-205ENST00000541587 1637 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
SSR4P51571 AC061975.6-201ENST00000579045 1553 ntBASIC19.37■□□□□ 0.69
SSR4P51571 CERS4-208ENST00000559336 1515 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
SSR4P51571 CD58-203ENST00000457047 1328 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
SSR4P51571 IGDCC4-201ENST00000352385 6508 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
SSR4P51571 BMP1-204ENST00000397814 836 ntTSL 4 BASIC19.37■□□□□ 0.69
SSR4P51571 AL645608.9-201ENST00000442292 829 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
SSR4P51571 UMAD1-202ENST00000463725 559 ntTSL 4 BASIC19.37■□□□□ 0.69
SSR4P51571 PPP1R14BP3-201ENST00000509033 445 ntBASIC19.37■□□□□ 0.69
SSR4P51571 SLC25A29-212ENST00000555927 960 ntTSL 2 BASIC19.37■□□□□ 0.69
SSR4P51571 DHPS-223ENST00000614126 1124 ntTSL 5 BASIC19.37■□□□□ 0.69
SSR4P51571 GXYLT1P5-201ENST00000614548 1189 ntBASIC19.37■□□□□ 0.69
SSR4P51571 MAZ-216ENST00000616501 991 ntTSL 5 BASIC19.37■□□□□ 0.69
SSR4P51571 ABHD1-207ENST00000621324 1078 ntTSL 5 BASIC19.37■□□□□ 0.69
SSR4P51571 AC013268.1-206ENST00000638368 961 ntBASIC19.37■□□□□ 0.69
SSR4P51571 AC112229.1-201ENST00000639295 961 ntBASIC19.37■□□□□ 0.69
SSR4P51571 GRK4-204ENST00000503518 2136 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
SSR4P51571 AC012676.1-201ENST00000574705 1949 ntBASIC19.37■□□□□ 0.69
SSR4P51571 CCM2L-201ENST00000262659 2523 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
SSR4P51571 PLAGL1-207ENST00000417959 1645 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
SSR4P51571 HAUS4-203ENST00000347758 1428 ntTSL 2 BASIC19.36■□□□□ 0.69
SSR4P51571 RARRES2-201ENST00000223271 740 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
SSR4P51571 XBP1-202ENST00000344347 1131 ntTSL 5 BASIC19.36■□□□□ 0.69
SSR4P51571 TERF1P5-201ENST00000477545 1207 ntBASIC19.36■□□□□ 0.69
SSR4P51571 FAM66A-201ENST00000525829 921 ntTSL 2 BASIC19.36■□□□□ 0.69
SSR4P51571 NDUFA6-AS1-207ENST00000595777 833 ntTSL 5 BASIC19.36■□□□□ 0.69
SSR4P51571 CD99-212ENST00000624481 1089 ntAPPRIS ALT2 TSL 2 BASIC19.36■□□□□ 0.69
SSR4P51571 CACNA1H-202ENST00000358590 8069 ntAPPRIS ALT2 TSL 5 BASIC19.36■□□□□ 0.69
SSR4P51571 SCRN2-212ENST00000584123 1745 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
SSR4P51571 KLF1-201ENST00000264834 1592 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
SSR4P51571 DGKQ-201ENST00000273814 4636 ntAPPRIS P2 TSL 1 (best) BASIC19.36■□□□□ 0.69
SSR4P51571 CCDC74A-201ENST00000295171 1543 ntAPPRIS P3 TSL 1 (best) BASIC19.35■□□□□ 0.69
SSR4P51571 CCDC74B-201ENST00000310463 1549 ntAPPRIS P3 TSL 2 BASIC19.35■□□□□ 0.69
SSR4P51571 IRX4-202ENST00000505790 2538 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
SSR4P51571 C16orf58-209ENST00000567994 1845 ntTSL 5 BASIC19.35■□□□□ 0.69
SSR4P51571 DMRT1-201ENST00000382276 2222 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
SSR4P51571 NAA10-208ENST00000464845 1772 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
SSR4P51571 MAD2L2-204ENST00000376667 872 ntAPPRIS P1 TSL 2 BASIC19.35■□□□□ 0.69
SSR4P51571 SEC23A-213ENST00000557280 561 ntTSL 4 BASIC19.35■□□□□ 0.69
SSR4P51571 AC005181.1-201ENST00000604782 1256 ntBASIC19.35■□□□□ 0.69
SSR4P51571 PARP1-210ENST00000629232 477 ntTSL 5 BASIC19.35■□□□□ 0.69
SSR4P51571 RPL13-202ENST00000393099 2385 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
SSR4P51571 AC132008.2-203ENST00000418868 1552 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
SSR4P51571 CD55-205ENST00000367067 1843 ntAPPRIS ALT2 TSL 5 BASIC19.35■□□□□ 0.69
SSR4P51571 MAF1-205ENST00000534585 1754 ntTSL 5 BASIC19.34■□□□□ 0.69
SSR4P51571 HIRA-202ENST00000340170 3395 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
SSR4P51571 NGLY1-204ENST00000396649 2024 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
SSR4P51571 PSMD7-201ENST00000219313 1670 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
SSR4P51571 PEX10-202ENST00000447513 1997 ntAPPRIS P2 TSL 1 (best) BASIC19.34■□□□□ 0.69
SSR4P51571 ATPIF1-203ENST00000468425 539 ntTSL 2 BASIC19.34■□□□□ 0.69
SSR4P51571 AC091138.1-202ENST00000578967 457 ntTSL 2 BASIC19.34■□□□□ 0.69
SSR4P51571 TRAPPC3-208ENST00000616074 1114 ntTSL 5 BASIC19.34■□□□□ 0.69
SSR4P51571 AL161421.1-201ENST00000619666 1101 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
SSR4P51571 PPP1R13B-201ENST00000202556 4958 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
SSR4P51571 KDM3B-201ENST00000314358 6813 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
SSR4P51571 SPR-201ENST00000234454 1480 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
SSR4P51571 ERMP1-202ENST00000339450 5376 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
SSR4P51571 BMP6-201ENST00000283147 2780 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
SSR4P51571 ARHGAP27-201ENST00000290470 1376 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
SSR4P51571 CACNG8-201ENST00000270458 8747 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.69
SSR4P51571 NAA20-203ENST00000398602 1604 ntTSL 5 BASIC19.33■□□□□ 0.69
SSR4P51571 MRPL39-201ENST00000307301 1199 ntAPPRIS ALT2 TSL 5 BASIC19.33■□□□□ 0.68
SSR4P51571 MRPL39-202ENST00000352957 1110 ntAPPRIS P3 TSL 1 (best) BASIC19.33■□□□□ 0.68
SSR4P51571 NXNL2-201ENST00000375854 805 ntAPPRIS P1 TSL 5 BASIC19.33■□□□□ 0.68
SSR4P51571 HLA-L-209ENST00000420110 1011 ntBASIC19.33■□□□□ 0.68
SSR4P51571 CNN2P6-201ENST00000439038 900 ntBASIC19.33■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 30.2 ms