Protein–RNA interactions for Protein: P39059

COL15A1, Collagen alpha-1(XV) chain, humanhuman

Predictions only

Length 1,388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL15A1P39059 AC005786.3-201ENST00000589360 565 ntTSL 3 BASIC26.94■■□□□ 1.9
COL15A1P39059 KREMEN2-203ENST00000571007 1877 ntTSL 2 BASIC26.94■■□□□ 1.9
COL15A1P39059 RANBP10-206ENST00000602677 2374 ntTSL 5 BASIC26.94■■□□□ 1.9
COL15A1P39059 MIR222HG-202ENST00000602507 1758 ntTSL 5 BASIC26.94■■□□□ 1.9
COL15A1P39059 CADM1-201ENST00000331581 1766 ntTSL 1 (best) BASIC26.93■■□□□ 1.9
COL15A1P39059 KATNAL2-208ENST00000592005 1348 ntTSL 1 (best) BASIC26.93■■□□□ 1.9
COL15A1P39059 LINC00471-201ENST00000313064 1282 ntTSL 1 (best) BASIC26.93■■□□□ 1.9
COL15A1P39059 GAS7-202ENST00000396115 929 ntTSL 5 BASIC26.93■■□□□ 1.9
COL15A1P39059 ESRRAP1-201ENST00000400596 1257 ntBASIC26.93■■□□□ 1.9
COL15A1P39059 AC007285.1-201ENST00000422239 893 ntTSL 5 BASIC26.93■■□□□ 1.9
COL15A1P39059 NREP-209ENST00000455559 698 ntAPPRIS P1 TSL 4 BASIC26.93■■□□□ 1.9
COL15A1P39059 HAUS4-201ENST00000206474 1642 ntAPPRIS P1 TSL 1 (best) BASIC26.93■■□□□ 1.9
COL15A1P39059 NRL-203ENST00000397002 1976 ntAPPRIS P1 TSL 1 (best) BASIC26.93■■□□□ 1.9
COL15A1P39059 KLC1-205ENST00000380038 2322 ntTSL 2 BASIC26.93■■□□□ 1.9
COL15A1P39059 DUSP26-201ENST00000256261 1835 ntAPPRIS P1 TSL 1 (best) BASIC26.92■■□□□ 1.9
COL15A1P39059 SIMC1-202ENST00000341199 2056 ntAPPRIS P3 TSL 2 BASIC26.92■■□□□ 1.9
COL15A1P39059 ZNF668-205ENST00000426488 2282 ntTSL 5 BASIC26.92■■□□□ 1.9
COL15A1P39059 IKBKG-212ENST00000617207 1949 ntAPPRIS ALT1 TSL 3 BASIC26.92■■□□□ 1.9
COL15A1P39059 TRA2B-203ENST00000382191 976 ntTSL 2 BASIC26.92■■□□□ 1.9
COL15A1P39059 GCSHP5-201ENST00000443090 522 ntBASIC26.92■■□□□ 1.9
COL15A1P39059 TLE3-216ENST00000559191 1575 ntTSL 5 BASIC26.92■■□□□ 1.9
COL15A1P39059 FUZ-212ENST00000528094 1479 ntTSL 2 BASIC26.92■■□□□ 1.9
COL15A1P39059 HOXD1-201ENST00000331462 1975 ntAPPRIS P1 TSL 1 (best) BASIC26.91■■□□□ 1.9
COL15A1P39059 PRR35-201ENST00000409413 2216 ntAPPRIS P1 TSL 1 (best) BASIC26.91■■□□□ 1.9
COL15A1P39059 LOXL1-201ENST00000261921 2351 ntAPPRIS P1 TSL 1 (best) BASIC26.91■■□□□ 1.9
COL15A1P39059 LGALS9B-201ENST00000324290 1243 ntAPPRIS P2 TSL 5 BASIC26.91■■□□□ 1.9
COL15A1P39059 GRTP1-201ENST00000326039 1294 ntTSL 1 (best) BASIC26.91■■□□□ 1.9
COL15A1P39059 NAA20-202ENST00000334982 1260 ntAPPRIS P1 TSL 1 (best) BASIC26.91■■□□□ 1.9
COL15A1P39059 DGCR6L-202ENST00000405465 962 ntTSL 3 BASIC26.91■■□□□ 1.9
COL15A1P39059 AL121761.1-202ENST00000412571 415 ntTSL 2 BASIC26.91■■□□□ 1.9
COL15A1P39059 C14orf28-204ENST00000557112 1097 ntTSL 5 BASIC26.91■■□□□ 1.9
COL15A1P39059 JOSD2-205ENST00000601423 802 ntAPPRIS P1 TSL 1 (best) BASIC26.91■■□□□ 1.9
COL15A1P39059 AL591742.1-201ENST00000604433 565 ntBASIC26.91■■□□□ 1.9
COL15A1P39059 AC243732.1-201ENST00000612648 864 ntBASIC26.91■■□□□ 1.9
COL15A1P39059 ABHD1-207ENST00000621324 1078 ntTSL 5 BASIC26.91■■□□□ 1.9
COL15A1P39059 AC093762.2-201ENST00000641700 291 ntAPPRIS P1 BASIC26.91■■□□□ 1.9
COL15A1P39059 PKM-201ENST00000319622 2717 ntAPPRIS P5 TSL 2 BASIC26.91■■□□□ 1.9
COL15A1P39059 ME2-208ENST00000638937 2471 ntTSL 5 BASIC26.91■■□□□ 1.9
COL15A1P39059 KPTN-201ENST00000338134 1691 ntAPPRIS P1 TSL 1 (best) BASIC26.91■■□□□ 1.9
COL15A1P39059 GPSM1-204ENST00000429455 2057 ntTSL 3 BASIC26.9■■□□□ 1.9
COL15A1P39059 IGFBP1-203ENST00000468955 1369 ntTSL 5 BASIC26.9■■□□□ 1.9
COL15A1P39059 HLA-DPB1-211ENST00000418931 1560 ntAPPRIS P2 BASIC26.9■■□□□ 1.9
COL15A1P39059 BTBD7-205ENST00000554565 2697 ntTSL 1 (best) BASIC26.9■■□□□ 1.9
COL15A1P39059 C9orf163-202ENST00000624034 2573 ntBASIC26.9■■□□□ 1.9
COL15A1P39059 LGALS7-201ENST00000378626 466 ntAPPRIS P1 TSL 1 (best) BASIC26.9■■□□□ 1.9
COL15A1P39059 AL359182.2-201ENST00000457720 606 ntTSL 3 BASIC26.9■■□□□ 1.9
COL15A1P39059 ARHGEF9-204ENST00000374878 2217 ntTSL 1 (best) BASIC26.9■■□□□ 1.9
COL15A1P39059 CDK5-204ENST00000485972 1758 ntAPPRIS P1 TSL 1 (best) BASIC26.9■■□□□ 1.9
COL15A1P39059 SCARB1-211ENST00000546215 1597 ntTSL 1 (best) BASIC26.9■■□□□ 1.9
COL15A1P39059 C1orf229-201ENST00000623686 2258 ntBASIC26.89■■□□□ 1.9
COL15A1P39059 TPST2-203ENST00000403880 2084 ntAPPRIS P1 TSL 5 BASIC26.89■■□□□ 1.9
COL15A1P39059 CDKN1C-202ENST00000414822 2051 ntAPPRIS P3 TSL 1 (best) BASIC26.89■■□□□ 1.9
COL15A1P39059 FAHD1-202ENST00000382668 1845 ntTSL 1 (best) BASIC26.89■■□□□ 1.9
COL15A1P39059 TRPT1-201ENST00000317459 962 ntAPPRIS P3 TSL 1 (best) BASIC26.89■■□□□ 1.9
COL15A1P39059 GNAS-AS1-201ENST00000424094 1156 ntTSL 1 (best) BASIC26.89■■□□□ 1.9
COL15A1P39059 BEAN1-AS1-201ENST00000564618 533 ntTSL 4 BASIC26.89■■□□□ 1.9
COL15A1P39059 TANGO2-202ENST00000398042 2011 ntTSL 2 BASIC26.89■■□□□ 1.89
COL15A1P39059 RENBP-201ENST00000369997 1322 ntTSL 5 BASIC26.88■■□□□ 1.89
COL15A1P39059 MAN2C1-244ENST00000618257 1346 ntTSL 5 BASIC26.88■■□□□ 1.89
COL15A1P39059 SNX21-212ENST00000491381 1607 ntTSL 1 (best) BASIC26.88■■□□□ 1.89
COL15A1P39059 DLL3-202ENST00000356433 2055 ntAPPRIS P1 TSL 2 BASIC26.88■■□□□ 1.89
COL15A1P39059 CKLF-201ENST00000264001 669 ntAPPRIS P4 TSL 1 (best) BASIC26.88■■□□□ 1.89
COL15A1P39059 NUDT22-201ENST00000279206 1094 ntAPPRIS P3 TSL 1 (best) BASIC26.88■■□□□ 1.89
COL15A1P39059 INS-203ENST00000397262 639 ntAPPRIS P1 TSL 1 (best) BASIC26.88■■□□□ 1.89
COL15A1P39059 NUDT22-204ENST00000441250 986 ntAPPRIS ALT2 TSL 5 BASIC26.88■■□□□ 1.89
COL15A1P39059 IRX5-204ENST00000560154 879 ntTSL 5 BASIC26.88■■□□□ 1.89
COL15A1P39059 TIMM50-213ENST00000599794 786 ntTSL 2 BASIC26.88■■□□□ 1.89
COL15A1P39059 IRX5-205ENST00000620085 881 ntTSL 1 (best) BASIC26.88■■□□□ 1.89
COL15A1P39059 AL137002.2-201ENST00000639766 2238 ntTSL 5 BASIC26.88■■□□□ 1.89
COL15A1P39059 RGS7-204ENST00000366565 2494 ntAPPRIS P3 TSL 1 (best) BASIC26.88■■□□□ 1.89
COL15A1P39059 ZNF37BP-201ENST00000435805 1695 ntTSL 5 BASIC26.88■■□□□ 1.89
COL15A1P39059 AKT1S1-206ENST00000391834 1849 ntAPPRIS P1 TSL 5 BASIC26.88■■□□□ 1.89
COL15A1P39059 RHBDL1-202ENST00000352681 1463 ntAPPRIS P1 TSL 1 (best) BASIC26.88■■□□□ 1.89
COL15A1P39059 DMRT2-209ENST00000635183 2190 ntTSL 5 BASIC26.87■■□□□ 1.89
COL15A1P39059 AP004608.1-202ENST00000533390 1863 ntTSL 1 (best) BASIC26.87■■□□□ 1.89
COL15A1P39059 AC061975.6-201ENST00000579045 1553 ntBASIC26.87■■□□□ 1.89
COL15A1P39059 GTF2A2-203ENST00000396061 758 ntAPPRIS P1 TSL 2 BASIC26.87■■□□□ 1.89
COL15A1P39059 TMEM240-202ENST00000425828 717 ntAPPRIS P1 TSL 2 BASIC26.87■■□□□ 1.89
COL15A1P39059 AC244517.4-202ENST00000624089 484 ntTSL 3 BASIC26.87■■□□□ 1.89
COL15A1P39059 PAPD7-201ENST00000230859 5459 ntTSL 1 (best) BASIC26.87■■□□□ 1.89
COL15A1P39059 BFSP1-202ENST00000377873 2207 ntAPPRIS P1 TSL 1 (best) BASIC26.87■■□□□ 1.89
COL15A1P39059 GPR6-202ENST00000414000 1945 ntTSL 2 BASIC26.87■■□□□ 1.89
COL15A1P39059 PLPP5-209ENST00000529359 2185 ntTSL 1 (best) BASIC26.87■■□□□ 1.89
COL15A1P39059 TMEM51-203ENST00000400796 1842 ntAPPRIS P1 TSL 1 (best) BASIC26.87■■□□□ 1.89
COL15A1P39059 STOML1-201ENST00000316900 2169 ntTSL 2 BASIC26.86■■□□□ 1.89
COL15A1P39059 MDK-205ENST00000405308 1166 ntAPPRIS P2 TSL 2 BASIC26.86■■□□□ 1.89
COL15A1P39059 INO80E-214ENST00000620599 515 ntTSL 2 BASIC26.86■■□□□ 1.89
COL15A1P39059 THRA-209ENST00000584985 2421 ntTSL 1 (best) BASIC26.86■■□□□ 1.89
COL15A1P39059 RARG-204ENST00000543726 1779 ntTSL 2 BASIC26.86■■□□□ 1.89
COL15A1P39059 KLF3-203ENST00000514033 1871 ntTSL 1 (best) BASIC26.85■■□□□ 1.89
COL15A1P39059 ANXA8-204ENST00000583911 1874 ntTSL 2 BASIC26.85■■□□□ 1.89
COL15A1P39059 UPK3B-203ENST00000394849 1041 ntAPPRIS ALT2 TSL 2 BASIC26.85■■□□□ 1.89
COL15A1P39059 RAP1B-220ENST00000539091 977 ntTSL 2 BASIC26.85■■□□□ 1.89
COL15A1P39059 AC006058.3-201ENST00000606217 1069 ntBASIC26.85■■□□□ 1.89
COL15A1P39059 APOC3-205ENST00000630701 541 ntTSL 1 (best) BASIC26.85■■□□□ 1.89
COL15A1P39059 NEURL3-201ENST00000310865 1710 ntTSL 1 (best) BASIC26.85■■□□□ 1.89
COL15A1P39059 LMTK3-202ENST00000600059 5113 ntAPPRIS ALT2 TSL 2 BASIC26.85■■□□□ 1.89
COL15A1P39059 UHRF1BP1L-202ENST00000356828 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC26.85■■□□□ 1.89
COL15A1P39059 LZTS2-201ENST00000370220 5741 ntAPPRIS P1 TSL 1 (best) BASIC26.85■■□□□ 1.89
COL15A1P39059 CCS-208ENST00000533244 1430 ntAPPRIS P1 TSL 1 (best) BASIC26.85■■□□□ 1.89
Retrieved 100 of 98,524 protein–RNA pairs in 29.9 ms