Protein–RNA interactions for Protein: P33241

LSP1, Lymphocyte-specific protein 1, humanhuman

Predictions only

Length 339 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LSP1P33241 ZNF503-AS2-202ENST00000466942 1430 ntTSL 2 BASIC21.17■□□□□ 0.98
LSP1P33241 MAIP1-201ENST00000295079 1495 ntAPPRIS P2 TSL 2 BASIC21.17■□□□□ 0.98
LSP1P33241 CENPS-CORT-201ENST00000400900 1469 ntTSL 2 BASIC21.17■□□□□ 0.98
LSP1P33241 SYNGR2-203ENST00000588282 1553 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
LSP1P33241 SPOCK3-215ENST00000510741 1963 ntAPPRIS ALT2 TSL 5 BASIC21.17■□□□□ 0.98
LSP1P33241 NOTCH2NL-204ENST00000579793 1954 ntAPPRIS ALT2 TSL 2 BASIC21.17■□□□□ 0.98
LSP1P33241 USP39-204ENST00000409766 2033 ntTSL 2 BASIC21.17■□□□□ 0.98
LSP1P33241 CEP55-201ENST00000371485 2638 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
LSP1P33241 ADAM33-202ENST00000356518 3677 ntAPPRIS P3 TSL 1 (best) BASIC21.17■□□□□ 0.98
LSP1P33241 OLIG3-201ENST00000367734 2049 ntAPPRIS P1 BASIC21.16■□□□□ 0.98
LSP1P33241 AC020907.5-201ENST00000624372 1936 ntBASIC21.16■□□□□ 0.98
LSP1P33241 STX4-201ENST00000313843 1481 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
LSP1P33241 TMEM179-204ENST00000556573 1430 ntAPPRIS P1 TSL 3 BASIC21.16■□□□□ 0.98
LSP1P33241 THA1P-201ENST00000590384 1145 ntBASIC21.16■□□□□ 0.98
LSP1P33241 NTRK1-201ENST00000358660 2492 ntAPPRIS ALT2 TSL 2 BASIC21.16■□□□□ 0.98
LSP1P33241 LIN54-209ENST00000510557 2257 ntTSL 2 BASIC21.16■□□□□ 0.98
LSP1P33241 PEX5-204ENST00000412720 2105 ntTSL 2 BASIC21.16■□□□□ 0.98
LSP1P33241 CAMKK2-208ENST00000412367 2006 ntAPPRIS ALT2 TSL 1 (best) BASIC21.16■□□□□ 0.98
LSP1P33241 PHF2-202ENST00000375376 3045 ntTSL 5 BASIC21.15■□□□□ 0.98
LSP1P33241 AL353743.1-201ENST00000637846 1769 ntTSL 5 BASIC21.15■□□□□ 0.98
LSP1P33241 SMPD2-201ENST00000258052 1645 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
LSP1P33241 PIK3R1-201ENST00000320694 2625 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
LSP1P33241 RPP38-207ENST00000616640 1537 ntAPPRIS P1 TSL 2 BASIC21.15■□□□□ 0.98
LSP1P33241 RNF212-202ENST00000382968 2335 ntAPPRIS P3 TSL 1 (best) BASIC21.15■□□□□ 0.98
LSP1P33241 IMPDH1-214ENST00000496200 2283 ntTSL 2 BASIC21.15■□□□□ 0.98
LSP1P33241 BACE2-202ENST00000330333 2993 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
LSP1P33241 BTBD19-201ENST00000409335 1214 ntTSL 5 BASIC21.15■□□□□ 0.98
LSP1P33241 NPW-202ENST00000566435 991 ntAPPRIS ALT2 TSL 1 (best) BASIC21.15■□□□□ 0.98
LSP1P33241 AC019171.1-201ENST00000601251 1056 ntBASIC21.15■□□□□ 0.98
LSP1P33241 RCN3-201ENST00000270645 1859 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
LSP1P33241 ILDR2-207ENST00000529071 2566 ntAPPRIS ALT2 TSL 5 BASIC21.15■□□□□ 0.98
LSP1P33241 TRA2A-201ENST00000297071 1845 ntAPPRIS P3 TSL 1 (best) BASIC21.15■□□□□ 0.98
LSP1P33241 GAS6-201ENST00000327773 2490 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
LSP1P33241 ZNF692-202ENST00000366471 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC21.15■□□□□ 0.98
LSP1P33241 GALNS-201ENST00000268695 2363 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
LSP1P33241 FAM69B-202ENST00000371692 1668 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
LSP1P33241 AC044802.1-201ENST00000501143 2894 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
LSP1P33241 BCR-202ENST00000359540 4708 ntTSL 1 (best) BASIC21.14■□□□□ 0.98
LSP1P33241 MAP1LC3A-201ENST00000360668 1574 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
LSP1P33241 C22orf34-203ENST00000405854 1593 ntTSL 5 BASIC21.14■□□□□ 0.98
LSP1P33241 ACSL1-205ENST00000504900 1583 ntTSL 5 BASIC21.14■□□□□ 0.98
LSP1P33241 SPPL2B-211ENST00000614794 1559 ntTSL 1 (best) BASIC21.14■□□□□ 0.98
LSP1P33241 MGAT3-201ENST00000341184 5062 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
LSP1P33241 HYI-213ENST00000583037 1322 ntTSL 5 BASIC21.14■□□□□ 0.97
LSP1P33241 CLINT1-207ENST00000523908 2346 ntAPPRIS ALT1 TSL 1 (best) BASIC21.14■□□□□ 0.97
LSP1P33241 NFKBIE-204ENST00000619360 2327 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
LSP1P33241 AC007383.2-202ENST00000435627 482 ntTSL 2 BASIC21.14■□□□□ 0.97
LSP1P33241 ZBED3-201ENST00000255198 6172 ntAPPRIS P2 TSL 1 (best) BASIC21.14■□□□□ 0.97
LSP1P33241 EGFL7-201ENST00000308874 1747 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
LSP1P33241 AC133555.3-201ENST00000549950 1693 ntAPPRIS P5 TSL 5 BASIC21.14■□□□□ 0.97
LSP1P33241 AC106782.1-201ENST00000550538 1693 ntAPPRIS P5 TSL 5 BASIC21.14■□□□□ 0.97
LSP1P33241 SNRNP70-201ENST00000221448 1603 ntTSL 2 BASIC21.14■□□□□ 0.97
LSP1P33241 FBXW7-202ENST00000281708 4976 ntAPPRIS P4 TSL 1 (best) BASIC21.14■□□□□ 0.97
LSP1P33241 NAAA-201ENST00000286733 1900 ntAPPRIS P2 TSL 5 BASIC21.14■□□□□ 0.97
LSP1P33241 CCT5-205ENST00000506600 1939 ntTSL 2 BASIC21.14■□□□□ 0.97
LSP1P33241 RXFP3-201ENST00000330120 1852 ntAPPRIS P1 BASIC21.13■□□□□ 0.97
LSP1P33241 IVD-206ENST00000487418 1809 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
LSP1P33241 PALM-207ENST00000590161 2137 ntTSL 4 BASIC21.13■□□□□ 0.97
LSP1P33241 TRAPPC12-202ENST00000382110 2483 ntAPPRIS P2 TSL 2 BASIC21.13■□□□□ 0.97
LSP1P33241 RAX-202ENST00000334889 3197 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
LSP1P33241 ERF-202ENST00000440177 2032 ntTSL 2 BASIC21.13■□□□□ 0.97
LSP1P33241 SHROOM1-202ENST00000378676 2352 ntAPPRIS ALT2 TSL 5 BASIC21.13■□□□□ 0.97
LSP1P33241 SDHAF1-201ENST00000378887 1117 ntAPPRIS P1 BASIC21.13■□□□□ 0.97
LSP1P33241 AC079089.2-201ENST00000531211 1277 ntBASIC21.13■□□□□ 0.97
LSP1P33241 MLF2-206ENST00000539187 1110 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
LSP1P33241 FLVCR1-201ENST00000366971 5939 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
LSP1P33241 ARHGDIA-201ENST00000269321 1906 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
LSP1P33241 ABLIM2-204ENST00000407564 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC21.13■□□□□ 0.97
LSP1P33241 CTU2-210ENST00000567949 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC21.13■□□□□ 0.97
LSP1P33241 DMRT2-201ENST00000259622 2459 ntTSL 2 BASIC21.13■□□□□ 0.97
LSP1P33241 CAPN1-226ENST00000533820 3083 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
LSP1P33241 SCAND1-202ENST00000373991 1727 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
LSP1P33241 PKM-215ENST00000565154 2004 ntAPPRIS ALT1 TSL 2 BASIC21.12■□□□□ 0.97
LSP1P33241 ZMYND19-201ENST00000298585 1375 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
LSP1P33241 TERF1-202ENST00000276603 1677 ntAPPRIS P4 TSL 1 (best) BASIC21.12■□□□□ 0.97
LSP1P33241 KLC2-204ENST00000394067 2898 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
LSP1P33241 NOP14-202ENST00000398071 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC21.12■□□□□ 0.97
LSP1P33241 USP45-205ENST00000472914 1617 ntTSL 5 BASIC21.12■□□□□ 0.97
LSP1P33241 POLD2-202ENST00000406581 2158 ntAPPRIS P1 TSL 2 BASIC21.12■□□□□ 0.97
LSP1P33241 SOX4-201ENST00000244745 5852 ntAPPRIS P1 BASIC21.12■□□□□ 0.97
LSP1P33241 TANGO2-217ENST00000456048 2439 ntTSL 2 BASIC21.12■□□□□ 0.97
LSP1P33241 SNX5-217ENST00000606557 1087 ntBASIC21.12■□□□□ 0.97
LSP1P33241 ACSS3-201ENST00000261206 2666 ntAPPRIS ALT1 TSL 1 (best) BASIC21.12■□□□□ 0.97
LSP1P33241 GPAA1-201ENST00000355091 2078 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
LSP1P33241 ACAD8-202ENST00000374752 1797 ntTSL 2 BASIC21.12■□□□□ 0.97
LSP1P33241 EML3-217ENST00000531557 2509 ntTSL 5 BASIC21.12■□□□□ 0.97
LSP1P33241 TMEM259-209ENST00000592590 2509 ntTSL 5 BASIC21.12■□□□□ 0.97
LSP1P33241 DDX55-205ENST00000538744 1735 ntTSL 5 BASIC21.12■□□□□ 0.97
LSP1P33241 STARD10-213ENST00000538536 1678 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
LSP1P33241 PLEKHM2-202ENST00000375799 4122 ntAPPRIS P2 TSL 1 (best) BASIC21.11■□□□□ 0.97
LSP1P33241 FGF7P6-201ENST00000377614 1890 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
LSP1P33241 BX664615.2-202ENST00000639056 1888 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
LSP1P33241 SMARCD2-212ENST00000613943 2342 ntTSL 5 BASIC21.11■□□□□ 0.97
LSP1P33241 GRINA-202ENST00000395068 1814 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
LSP1P33241 AL162377.1-201ENST00000618844 1793 ntBASIC21.11■□□□□ 0.97
LSP1P33241 TMPRSS5-201ENST00000299882 2232 ntAPPRIS P3 TSL 1 (best) BASIC21.11■□□□□ 0.97
LSP1P33241 AURKA-202ENST00000347343 2248 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
LSP1P33241 MAPK15-201ENST00000338033 1961 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
LSP1P33241 STMN4-201ENST00000265770 1250 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
LSP1P33241 C9orf147-202ENST00000457681 561 ntTSL 2 BASIC21.11■□□□□ 0.97
Retrieved 100 of 98,524 protein–RNA pairs in 35.7 ms