Protein–RNA interactions for Protein: P29965

CD40LG, CD40 ligand, humanhuman

Predictions only

Length 261 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD40LGP29965 TSNARE1-208ENST00000524325 1963 ntAPPRIS P3 TSL 2 BASIC18.66■□□□□ 0.58
CD40LGP29965 HCG18-235ENST00000426882 4862 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
CD40LGP29965 DSCAM-201ENST00000400454 8552 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CD40LGP29965 FST-201ENST00000256759 2519 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CD40LGP29965 CAPN1-226ENST00000533820 3083 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CD40LGP29965 ADGRG2-210ENST00000379878 4803 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
CD40LGP29965 RNF146-213ENST00000610153 2070 ntAPPRIS ALT1 TSL 2 BASIC18.66■□□□□ 0.58
CD40LGP29965 TMUB1-203ENST00000462940 1549 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CD40LGP29965 LAYN-202ENST00000375615 1836 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
CD40LGP29965 AC004987.1-201ENST00000428627 508 ntBASIC18.66■□□□□ 0.58
CD40LGP29965 TMEM191C-206ENST00000432134 1129 ntAPPRIS ALT2 TSL 5 BASIC18.66■□□□□ 0.58
CD40LGP29965 AL354928.1-201ENST00000438380 617 ntTSL 2 BASIC18.66■□□□□ 0.58
CD40LGP29965 RPS2P7-201ENST00000447334 885 ntBASIC18.66■□□□□ 0.58
CD40LGP29965 LINC02175-201ENST00000571219 1875 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
CD40LGP29965 CENPU-201ENST00000281453 1998 ntAPPRIS P2 TSL 1 (best) BASIC18.66■□□□□ 0.58
CD40LGP29965 ZC3H14-223ENST00000557607 1983 ntTSL 5 BASIC18.66■□□□□ 0.58
CD40LGP29965 FGFRL1-203ENST00000504138 1663 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CD40LGP29965 BACE2-202ENST00000330333 2993 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CD40LGP29965 ARFRP1-208ENST00000612256 2974 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
CD40LGP29965 ERLEC1-203ENST00000405123 1756 ntTSL 5 BASIC18.65■□□□□ 0.58
CD40LGP29965 TIGD6-202ENST00000515406 2429 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CD40LGP29965 DYM-203ENST00000442713 2147 ntTSL 2 BASIC18.65■□□□□ 0.58
CD40LGP29965 MAP7D2-203ENST00000443379 2476 ntAPPRIS ALT2 TSL 2 BASIC18.65■□□□□ 0.58
CD40LGP29965 TANGO2-212ENST00000434570 2180 ntTSL 2 BASIC18.65■□□□□ 0.58
CD40LGP29965 SKOR2-202ENST00000425639 3899 ntAPPRIS ALT2 TSL 5 BASIC18.65■□□□□ 0.58
CD40LGP29965 C17orf82-201ENST00000623772 1530 ntBASIC18.65■□□□□ 0.58
CD40LGP29965 B4GALNT1-202ENST00000418555 1861 ntTSL 2 BASIC18.65■□□□□ 0.58
CD40LGP29965 PPM1B-201ENST00000282412 2606 ntAPPRIS P4 TSL 1 (best) BASIC18.65■□□□□ 0.58
CD40LGP29965 CCT5-205ENST00000506600 1939 ntTSL 2 BASIC18.65■□□□□ 0.58
CD40LGP29965 CERS1-202ENST00000542296 1947 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
CD40LGP29965 RAC1-201ENST00000348035 2323 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CD40LGP29965 RAB4B-203ENST00000594800 1173 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
CD40LGP29965 ACVR1C-201ENST00000243349 8994 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CD40LGP29965 NUDT16L1-202ENST00000405142 2040 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
CD40LGP29965 ALDH5A1-204ENST00000491546 1699 ntTSL 5 BASIC18.65■□□□□ 0.58
CD40LGP29965 MPST-203ENST00000401419 1345 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CD40LGP29965 AC104581.1-201ENST00000324348 2852 ntAPPRIS P1 TSL 2 BASIC18.65■□□□□ 0.58
CD40LGP29965 ZNF385B-204ENST00000410066 3288 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CD40LGP29965 SEPT2-203ENST00000391971 3315 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CD40LGP29965 FAM239A-202ENST00000438107 2155 ntTSL 5 BASIC18.65■□□□□ 0.58
CD40LGP29965 WASH6P-203ENST00000460206 1826 ntTSL 5 BASIC18.65■□□□□ 0.58
CD40LGP29965 P3H4-201ENST00000355468 2791 ntAPPRIS P2 TSL 2 BASIC18.64■□□□□ 0.58
CD40LGP29965 BEST2-201ENST00000042931 1908 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
CD40LGP29965 SHROOM1-202ENST00000378676 2352 ntAPPRIS ALT2 TSL 5 BASIC18.64■□□□□ 0.58
CD40LGP29965 LRFN4-201ENST00000309602 2431 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
CD40LGP29965 DMRT2-201ENST00000259622 2459 ntTSL 2 BASIC18.64■□□□□ 0.58
CD40LGP29965 NRG2-202ENST00000289422 2923 ntTSL 5 BASIC18.64■□□□□ 0.58
CD40LGP29965 HERPUD2-201ENST00000311350 2474 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
CD40LGP29965 LARGE2-206ENST00000529052 2459 ntAPPRIS ALT2 TSL 2 BASIC18.64■□□□□ 0.58
CD40LGP29965 GLS-201ENST00000320717 4834 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.57
CD40LGP29965 TMSB15B-201ENST00000419165 1666 ntAPPRIS P1 TSL 2 BASIC18.64■□□□□ 0.57
CD40LGP29965 PFKFB3-204ENST00000379785 2181 ntTSL 5 BASIC18.64■□□□□ 0.57
CD40LGP29965 TNFRSF12A-201ENST00000326577 1033 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CD40LGP29965 SMKR1-201ENST00000462322 1035 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CD40LGP29965 SPCS2P3-201ENST00000500401 656 ntBASIC18.64■□□□□ 0.57
CD40LGP29965 HOMER3-207ENST00000594794 903 ntTSL 5 BASIC18.64■□□□□ 0.57
CD40LGP29965 POU3F2-201ENST00000328345 4879 ntAPPRIS P1 BASIC18.64■□□□□ 0.57
CD40LGP29965 ISLR2-208ENST00000565159 2824 ntAPPRIS P1 TSL 3 BASIC18.64■□□□□ 0.57
CD40LGP29965 CBWD6-213ENST00000613716 1820 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
CD40LGP29965 SLC39A5-209ENST00000454355 1968 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CD40LGP29965 UBE2F-201ENST00000272930 2009 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CD40LGP29965 ZNF692-204ENST00000451251 2065 ntAPPRIS ALT2 TSL 2 BASIC18.64■□□□□ 0.57
CD40LGP29965 POLD2-202ENST00000406581 2158 ntAPPRIS P1 TSL 2 BASIC18.64■□□□□ 0.57
CD40LGP29965 ZNF12-201ENST00000342651 2921 ntAPPRIS ALT2 TSL 2 BASIC18.63■□□□□ 0.57
CD40LGP29965 TMEM155-201ENST00000337677 2313 ntAPPRIS P2 TSL 1 (best) BASIC18.63■□□□□ 0.57
CD40LGP29965 TMEM259-209ENST00000592590 2509 ntTSL 5 BASIC18.63■□□□□ 0.57
CD40LGP29965 CERS4-205ENST00000558331 1803 ntTSL 5 BASIC18.63■□□□□ 0.57
CD40LGP29965 CNOT11-201ENST00000289382 2599 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CD40LGP29965 TMEM163-201ENST00000281924 1892 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CD40LGP29965 ZKSCAN7-205ENST00000426540 2791 ntAPPRIS P1 TSL 2 BASIC18.63■□□□□ 0.57
CD40LGP29965 C7orf43-206ENST00000456769 2046 ntTSL 2 BASIC18.63■□□□□ 0.57
CD40LGP29965 PFDN2-201ENST00000368010 677 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CD40LGP29965 CDCA5-202ENST00000404147 1012 ntTSL 2 BASIC18.63■□□□□ 0.57
CD40LGP29965 AC139795.1-203ENST00000515045 853 ntTSL 2 BASIC18.63■□□□□ 0.57
CD40LGP29965 AC087393.1-201ENST00000582896 145 ntBASIC18.63■□□□□ 0.57
CD40LGP29965 FGF22-202ENST00000586042 1288 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
CD40LGP29965 HNRNPUL1-221ENST00000617305 1018 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
CD40LGP29965 TCEA1-213ENST00000640041 1171 ntTSL 5 BASIC18.63■□□□□ 0.57
CD40LGP29965 TGFBR1-201ENST00000374990 5720 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
CD40LGP29965 AURKA-202ENST00000347343 2248 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CD40LGP29965 SESN3-202ENST00000416495 1408 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
CD40LGP29965 FNDC4-201ENST00000264703 1657 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CD40LGP29965 AC044802.1-201ENST00000501143 2894 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
CD40LGP29965 GPR35-202ENST00000403859 2032 ntAPPRIS P3 TSL 2 BASIC18.62■□□□□ 0.57
CD40LGP29965 AGTR1-209ENST00000497524 2359 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CD40LGP29965 TRAPPC12-202ENST00000382110 2483 ntAPPRIS P2 TSL 2 BASIC18.62■□□□□ 0.57
CD40LGP29965 HSPD1-202ENST00000388968 2455 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CD40LGP29965 AQP1-202ENST00000409611 1140 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
CD40LGP29965 ELOC-207ENST00000522337 816 ntAPPRIS P1 TSL 2 BASIC18.62■□□□□ 0.57
CD40LGP29965 ATXN3-252ENST00000620536 1044 ntTSL 5 BASIC18.62■□□□□ 0.57
CD40LGP29965 ATXN3-253ENST00000621269 936 ntTSL 5 BASIC18.62■□□□□ 0.57
CD40LGP29965 HLA-C-201ENST00000376228 1536 ntAPPRIS P2 BASIC18.62■□□□□ 0.57
CD40LGP29965 AL359710.1-201ENST00000427039 1544 ntTSL 2 BASIC18.62■□□□□ 0.57
CD40LGP29965 POLD2-201ENST00000223361 1597 ntTSL 5 BASIC18.62■□□□□ 0.57
CD40LGP29965 PARN-205ENST00000539279 1557 ntTSL 2 BASIC18.62■□□□□ 0.57
CD40LGP29965 CTU2-201ENST00000312060 1672 ntAPPRIS P3 TSL 5 BASIC18.62■□□□□ 0.57
CD40LGP29965 AC006128.1-201ENST00000624704 1661 ntBASIC18.62■□□□□ 0.57
CD40LGP29965 SCRN2-212ENST00000584123 1745 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
CD40LGP29965 SAMD14-203ENST00000503131 1938 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
CD40LGP29965 LSM12-201ENST00000293406 2308 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 36.8 ms