Protein–RNA interactions for Protein: P22090

RPS4Y1, 40S ribosomal protein S4, Y isoform 1, humanhuman

Known RBP Predictions only

Length 263 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPS4Y1P22090 SLC25A27-202ENST00000411689 2526 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
RPS4Y1P22090 CSNK1G2-201ENST00000255641 2918 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
RPS4Y1P22090 GPR35-204ENST00000430267 1399 ntAPPRIS ALT2 TSL 5 BASIC19.35■□□□□ 0.69
RPS4Y1P22090 MRAS-202ENST00000423968 1803 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
RPS4Y1P22090 SSX2IP-203ENST00000437941 5843 ntTSL 2 BASIC19.35■□□□□ 0.69
RPS4Y1P22090 HHIPL1-202ENST00000357223 2241 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
RPS4Y1P22090 IRS3P-201ENST00000223076 1006 ntBASIC19.35■□□□□ 0.69
RPS4Y1P22090 CHTF8-210ENST00000523421 766 ntTSL 3 BASIC19.35■□□□□ 0.69
RPS4Y1P22090 HERC2P4-206ENST00000568097 1062 ntTSL 5 BASIC19.35■□□□□ 0.69
RPS4Y1P22090 AES-207ENST00000586839 942 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
RPS4Y1P22090 PALM-207ENST00000590161 2137 ntTSL 4 BASIC19.35■□□□□ 0.69
RPS4Y1P22090 SCN1B-203ENST00000595652 814 ntTSL 2 BASIC19.35■□□□□ 0.69
RPS4Y1P22090 E4F1-206ENST00000565090 2028 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
RPS4Y1P22090 MEIS2-207ENST00000557796 2666 ntTSL 5 BASIC19.35■□□□□ 0.69
RPS4Y1P22090 ALKAL2-204ENST00000403610 1389 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
RPS4Y1P22090 CADPS-219ENST00000612439 5455 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
RPS4Y1P22090 PCED1A-202ENST00000360652 2016 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
RPS4Y1P22090 ARSA-205ENST00000453344 1650 ntTSL 2 BASIC19.34■□□□□ 0.69
RPS4Y1P22090 SGTA-201ENST00000221566 2330 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
RPS4Y1P22090 HNRNPLL-204ENST00000409328 1908 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
RPS4Y1P22090 NME4-201ENST00000219479 995 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
RPS4Y1P22090 NME4-202ENST00000382940 766 ntTSL 3 BASIC19.34■□□□□ 0.69
RPS4Y1P22090 TSPY4-201ENST00000383008 1143 ntAPPRIS ALT2 TSL 5 BASIC19.34■□□□□ 0.69
RPS4Y1P22090 AC027612.3-201ENST00000413684 1047 ntBASIC19.34■□□□□ 0.69
RPS4Y1P22090 TUNAR-203ENST00000554321 767 ntAPPRIS P1 TSL 4 BASIC19.34■□□□□ 0.69
RPS4Y1P22090 NME4-211ENST00000620944 1193 ntTSL 2 BASIC19.34■□□□□ 0.69
RPS4Y1P22090 UNC93B1-201ENST00000227471 2316 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
RPS4Y1P22090 AC138649.1-201ENST00000619611 1449 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
RPS4Y1P22090 TMEM178A-201ENST00000281961 1662 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
RPS4Y1P22090 PANO1-201ENST00000620120 1680 ntAPPRIS P1 BASIC19.33■□□□□ 0.69
RPS4Y1P22090 NAAA-201ENST00000286733 1900 ntAPPRIS P2 TSL 5 BASIC19.33■□□□□ 0.69
RPS4Y1P22090 AC135048.1-201ENST00000566056 1318 ntTSL 2 BASIC19.33■□□□□ 0.69
RPS4Y1P22090 SEPT5-210ENST00000455784 2070 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
RPS4Y1P22090 RNF114-202ENST00000622920 1284 ntTSL 5 BASIC19.33■□□□□ 0.68
RPS4Y1P22090 ZC3HAV1L-201ENST00000275766 1753 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
RPS4Y1P22090 FAM3A-208ENST00000419205 1763 ntTSL 2 BASIC19.33■□□□□ 0.68
RPS4Y1P22090 RABL2B-206ENST00000395598 2169 ntAPPRIS P3 TSL 1 (best) BASIC19.33■□□□□ 0.68
RPS4Y1P22090 PLSCR3-201ENST00000324822 1689 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
RPS4Y1P22090 DBX2-201ENST00000332700 2806 ntAPPRIS P1 TSL 2 BASIC19.33■□□□□ 0.68
RPS4Y1P22090 HTRA3-202ENST00000382512 2023 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
RPS4Y1P22090 EPO-201ENST00000252723 1330 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
RPS4Y1P22090 CLPSL2-201ENST00000360454 488 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
RPS4Y1P22090 PPCS-202ENST00000372560 793 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
RPS4Y1P22090 LRRC3C-201ENST00000377924 891 ntAPPRIS P1 TSL 3 BASIC19.32■□□□□ 0.68
RPS4Y1P22090 ZGPAT-204ENST00000369967 1890 ntAPPRIS P1 TSL 5 BASIC19.32■□□□□ 0.68
RPS4Y1P22090 SQLE-206ENST00000523430 1879 ntTSL 2 BASIC19.32■□□□□ 0.68
RPS4Y1P22090 AC010616.1-201ENST00000597630 2078 ntAPPRIS P1 TSL 5 BASIC19.32■□□□□ 0.68
RPS4Y1P22090 GPSM1-206ENST00000616132 2270 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
RPS4Y1P22090 ANAPC13-204ENST00000510994 1840 ntAPPRIS P1 TSL 2 BASIC19.32■□□□□ 0.68
RPS4Y1P22090 NUDT16L1-202ENST00000405142 2040 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
RPS4Y1P22090 HFE2-202ENST00000357836 2123 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
RPS4Y1P22090 WWTR1-AS1-202ENST00000479752 1700 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
RPS4Y1P22090 PAX1-202ENST00000444366 1850 ntAPPRIS ALT2 TSL 2 BASIC19.31■□□□□ 0.68
RPS4Y1P22090 HLA-G-204ENST00000376828 1490 ntAPPRIS ALT2 BASIC19.31■□□□□ 0.68
RPS4Y1P22090 EPN1-201ENST00000085079 2355 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
RPS4Y1P22090 ARHGAP24-206ENST00000503995 1273 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
RPS4Y1P22090 AP003071.3-201ENST00000562506 366 ntTSL 3 BASIC19.31■□□□□ 0.68
RPS4Y1P22090 BID-215ENST00000622694 2199 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
RPS4Y1P22090 FAM118B-209ENST00000533050 2402 ntAPPRIS P3 TSL 1 (best) BASIC19.31■□□□□ 0.68
RPS4Y1P22090 RPS6-203ENST00000380384 1355 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
RPS4Y1P22090 HIRA-201ENST00000263208 4053 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
RPS4Y1P22090 HSF4-215ENST00000521374 1515 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
RPS4Y1P22090 SLC12A2-201ENST00000262461 6885 ntAPPRIS P3 TSL 1 (best) BASIC19.3■□□□□ 0.68
RPS4Y1P22090 FAM69B-202ENST00000371692 1668 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
RPS4Y1P22090 TCP11-203ENST00000373974 1689 ntAPPRIS ALT2 TSL 2 BASIC19.3■□□□□ 0.68
RPS4Y1P22090 RAP2C-202ENST00000370874 2333 ntAPPRIS P1 TSL 2 BASIC19.3■□□□□ 0.68
RPS4Y1P22090 CDC14B-202ENST00000375241 5589 ntAPPRIS P2 TSL 1 (best) BASIC19.3■□□□□ 0.68
RPS4Y1P22090 STRADB-201ENST00000194530 2293 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
RPS4Y1P22090 TYMP-202ENST00000395678 1614 ntAPPRIS P3 TSL 1 (best) BASIC19.3■□□□□ 0.68
RPS4Y1P22090 DACT2-203ENST00000607983 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
RPS4Y1P22090 CRB3-202ENST00000356762 733 ntAPPRIS P4 TSL 1 (best) BASIC19.3■□□□□ 0.68
RPS4Y1P22090 NMRAL1-202ENST00000404295 1233 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
RPS4Y1P22090 AC145207.2-202ENST00000576554 565 ntTSL 5 BASIC19.3■□□□□ 0.68
RPS4Y1P22090 ZNF331-202ENST00000411977 2248 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
RPS4Y1P22090 MOK-226ENST00000522874 1890 ntAPPRIS ALT2 TSL 5 BASIC19.3■□□□□ 0.68
RPS4Y1P22090 ZNF584-201ENST00000306910 2332 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
RPS4Y1P22090 FNDC11-204ENST00000615526 2954 ntAPPRIS P1 BASIC19.29■□□□□ 0.68
RPS4Y1P22090 AL606970.3-201ENST00000446811 2246 ntTSL 2 BASIC19.29■□□□□ 0.68
RPS4Y1P22090 MPST-205ENST00000404802 1453 ntAPPRIS P1 TSL 3 BASIC19.29■□□□□ 0.68
RPS4Y1P22090 RASD1-202ENST00000579152 1404 ntTSL 2 BASIC19.29■□□□□ 0.68
RPS4Y1P22090 PAXIP1-AS1-201ENST00000608317 2256 ntBASIC19.29■□□□□ 0.68
RPS4Y1P22090 PHLPP1-201ENST00000262719 6390 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
RPS4Y1P22090 PHLDA3-201ENST00000367309 896 ntAPPRIS P1 TSL 5 BASIC19.29■□□□□ 0.68
RPS4Y1P22090 AL138963.3-201ENST00000610057 588 ntTSL 4 BASIC19.29■□□□□ 0.68
RPS4Y1P22090 EPHA8-202ENST00000374644 1802 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
RPS4Y1P22090 TRIM15-210ENST00000619857 2217 ntTSL 5 BASIC19.29■□□□□ 0.68
RPS4Y1P22090 DAZAP2-201ENST00000412716 2598 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
RPS4Y1P22090 KRT87P-202ENST00000534226 1464 ntBASIC19.28■□□□□ 0.68
RPS4Y1P22090 DEDD2-201ENST00000336034 1882 ntAPPRIS ALT1 TSL 1 (best) BASIC19.28■□□□□ 0.68
RPS4Y1P22090 DAPK3-201ENST00000301264 2105 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
RPS4Y1P22090 D2HGDH-201ENST00000321264 2617 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
RPS4Y1P22090 NR1H2-204ENST00000593926 1828 ntAPPRIS P2 TSL 5 BASIC19.28■□□□□ 0.68
RPS4Y1P22090 FMR1-AS1-202ENST00000596112 1845 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
RPS4Y1P22090 UBE2Q1-201ENST00000292211 3210 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
RPS4Y1P22090 MEIS3-212ENST00000561293 1918 ntAPPRIS P3 TSL 1 (best) BASIC19.28■□□□□ 0.68
RPS4Y1P22090 CLDN23-201ENST00000519106 2169 ntAPPRIS P1 BASIC19.28■□□□□ 0.68
RPS4Y1P22090 CPED1-202ENST00000340646 1056 ntTSL 5 BASIC19.28■□□□□ 0.68
RPS4Y1P22090 CCDC28B-201ENST00000373602 1089 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
RPS4Y1P22090 CDKN2AIPNL-201ENST00000395009 800 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
RPS4Y1P22090 AC079140.4-201ENST00000507448 529 ntBASIC19.28■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 56 ms