Protein–RNA interactions for Protein: P0CG48

UBC, Polyubiquitin-C, humanhuman

Known RBP Predictions only

Length 685 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBCP0CG48 ALX3-201ENST00000369792 1859 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
UBCP0CG48 CEBPE-201ENST00000206513 1554 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
UBCP0CG48 UBALD1-201ENST00000283474 1413 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
UBCP0CG48 SNX3-202ENST00000349379 890 ntTSL 2 BASIC18.44■□□□□ 0.54
UBCP0CG48 RNF208-201ENST00000391553 1077 ntAPPRIS P1 BASIC18.44■□□□□ 0.54
UBCP0CG48 CTAG1A-201ENST00000593606 993 ntTSL 5 BASIC18.44■□□□□ 0.54
UBCP0CG48 HFE2-202ENST00000357836 2123 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
UBCP0CG48 ATP11C-203ENST00000370557 6924 ntAPPRIS ALT2 TSL 5 BASIC18.44■□□□□ 0.54
UBCP0CG48 CDV3-201ENST00000264993 3307 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
UBCP0CG48 VKORC1L1-202ENST00000434382 1541 ntTSL 2 BASIC18.44■□□□□ 0.54
UBCP0CG48 GALNT10-202ENST00000377661 3778 ntTSL 5 BASIC18.43■□□□□ 0.54
UBCP0CG48 CENPH-201ENST00000283006 1389 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
UBCP0CG48 ROCK2-202ENST00000315872 8292 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
UBCP0CG48 TPM1-208ENST00000404484 1568 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
UBCP0CG48 ZNF510-203ENST00000375231 5616 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
UBCP0CG48 SNAP23-202ENST00000349777 2480 ntTSL 2 BASIC18.43■□□□□ 0.54
UBCP0CG48 BRSK2-201ENST00000308219 4089 ntAPPRIS P3 TSL 1 (best) BASIC18.43■□□□□ 0.54
UBCP0CG48 PEMT-201ENST00000255389 1013 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
UBCP0CG48 RAB32-201ENST00000367495 1217 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
UBCP0CG48 C15orf61-202ENST00000557807 769 ntTSL 2 BASIC18.43■□□□□ 0.54
UBCP0CG48 MIR663AHG-233ENST00000609248 830 ntTSL 5 BASIC18.43■□□□□ 0.54
UBCP0CG48 DNAJB5-201ENST00000312316 2391 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
UBCP0CG48 NDUFAF3-202ENST00000326925 2012 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
UBCP0CG48 OLIG3-201ENST00000367734 2049 ntAPPRIS P1 BASIC18.43■□□□□ 0.54
UBCP0CG48 PDXDC1-205ENST00000535621 2048 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
UBCP0CG48 CHRNA10-204ENST00000534359 1474 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
UBCP0CG48 PDCD2-203ENST00000443345 1897 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
UBCP0CG48 PYGO2-201ENST00000368456 1306 ntTSL 2 BASIC18.43■□□□□ 0.54
UBCP0CG48 CCDC88B-202ENST00000356786 4915 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
UBCP0CG48 EXOC3L2-202ENST00000413988 2964 ntAPPRIS P1 TSL 5 BASIC18.42■□□□□ 0.54
UBCP0CG48 TTYH3-201ENST00000258796 4840 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
UBCP0CG48 FAM118B-209ENST00000533050 2402 ntAPPRIS P3 TSL 1 (best) BASIC18.42■□□□□ 0.54
UBCP0CG48 ESR2-204ENST00000353772 2454 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
UBCP0CG48 T-202ENST00000366871 2250 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
UBCP0CG48 ZNF497-202ENST00000425453 2261 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
UBCP0CG48 LYPD1-202ENST00000397463 1891 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
UBCP0CG48 SLC46A3-202ENST00000380814 2121 ntAPPRIS ALT1 TSL 1 (best) BASIC18.42■□□□□ 0.54
UBCP0CG48 PRMT2-204ENST00000397628 954 ntTSL 2 BASIC18.42■□□□□ 0.54
UBCP0CG48 CKLF-205ENST00000417030 628 ntAPPRIS ALT2 TSL 4 BASIC18.42■□□□□ 0.54
UBCP0CG48 AC131281.2-201ENST00000520478 145 ntBASIC18.42■□□□□ 0.54
UBCP0CG48 C12orf43-208ENST00000539736 1033 ntAPPRIS ALT2 TSL 2 BASIC18.42■□□□□ 0.54
UBCP0CG48 NRG2-204ENST00000358522 2559 ntAPPRIS P5 TSL 1 (best) BASIC18.42■□□□□ 0.54
UBCP0CG48 ACP1-201ENST00000272065 1549 ntAPPRIS P5 TSL 1 (best) BASIC18.42■□□□□ 0.54
UBCP0CG48 ROR1-201ENST00000371079 5832 ntAPPRIS P2 TSL 1 (best) BASIC18.42■□□□□ 0.54
UBCP0CG48 ZNF419-203ENST00000354197 1569 ntTSL 5 BASIC18.42■□□□□ 0.54
UBCP0CG48 JPT1-206ENST00000476258 2289 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
UBCP0CG48 KRTAP5-7-201ENST00000398536 1408 ntAPPRIS P1 BASIC18.41■□□□□ 0.54
UBCP0CG48 C10orf55-202ENST00000412307 2360 ntAPPRIS P1 TSL 5 BASIC18.41■□□□□ 0.54
UBCP0CG48 AC079328.2-202ENST00000560903 1410 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
UBCP0CG48 FGFR2-224ENST00000613048 4369 ntTSL 5 BASIC18.41■□□□□ 0.54
UBCP0CG48 SUSD1-202ENST00000374263 2973 ntAPPRIS ALT2 TSL 2 BASIC18.41■□□□□ 0.54
UBCP0CG48 PCED1A-202ENST00000360652 2016 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
UBCP0CG48 POFUT1-201ENST00000375730 1507 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
UBCP0CG48 SRM-201ENST00000376957 1266 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
UBCP0CG48 U2AF1-202ENST00000380276 940 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
UBCP0CG48 PRICKLE4-201ENST00000394259 939 ntAPPRIS ALT2 TSL 5 BASIC18.41■□□□□ 0.54
UBCP0CG48 POLR2F-203ENST00000407936 582 ntTSL 3 BASIC18.41■□□□□ 0.54
UBCP0CG48 POLR2F-207ENST00000460648 518 ntTSL 4 BASIC18.41■□□□□ 0.54
UBCP0CG48 TUSC3-209ENST00000509380 1266 ntTSL 5 BASIC18.41■□□□□ 0.54
UBCP0CG48 TGFBR3L-202ENST00000565886 1260 ntAPPRIS P1 TSL 5 BASIC18.41■□□□□ 0.54
UBCP0CG48 NNT-AS1-206ENST00000606697 1945 ntTSL 2 BASIC18.41■□□□□ 0.54
UBCP0CG48 CENPU-201ENST00000281453 1998 ntAPPRIS P2 TSL 1 (best) BASIC18.41■□□□□ 0.54
UBCP0CG48 CFAP97-205ENST00000514798 2895 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
UBCP0CG48 INPP4A-201ENST00000074304 6752 ntTSL 5 BASIC18.4■□□□□ 0.54
UBCP0CG48 MRPL37-202ENST00000360840 1483 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
UBCP0CG48 ACOT2-201ENST00000238651 1774 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
UBCP0CG48 TCP11-202ENST00000311875 2166 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
UBCP0CG48 MAP1LC3A-201ENST00000360668 1574 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
UBCP0CG48 CCDC115-202ENST00000409127 1247 ntTSL 2 BASIC18.4■□□□□ 0.54
UBCP0CG48 PTMA-205ENST00000410064 814 ntTSL 2 BASIC18.4■□□□□ 0.54
UBCP0CG48 UBE2K-201ENST00000261427 5245 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
UBCP0CG48 RAB1B-201ENST00000311481 2007 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
UBCP0CG48 SMPD5-201ENST00000528912 1390 ntTSL 5 BASIC18.4■□□□□ 0.54
UBCP0CG48 GGA2-211ENST00000567468 1713 ntTSL 2 BASIC18.4■□□□□ 0.54
UBCP0CG48 OLA1-204ENST00000409546 2071 ntTSL 5 BASIC18.4■□□□□ 0.54
UBCP0CG48 CAMK2B-216ENST00000440254 2097 ntAPPRIS P4 TSL 1 (best) BASIC18.4■□□□□ 0.54
UBCP0CG48 PXYLP1-203ENST00000502783 2066 ntTSL 2 BASIC18.4■□□□□ 0.54
UBCP0CG48 CYP2A7-201ENST00000291764 2128 ntTSL 5 BASIC18.4■□□□□ 0.54
UBCP0CG48 CD55-205ENST00000367067 1843 ntAPPRIS ALT2 TSL 5 BASIC18.39■□□□□ 0.54
UBCP0CG48 GPC1-202ENST00000420138 1835 ntTSL 5 BASIC18.39■□□□□ 0.54
UBCP0CG48 DCK-201ENST00000286648 2716 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
UBCP0CG48 PELI3-202ENST00000349459 2783 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
UBCP0CG48 E4F1-206ENST00000565090 2028 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
UBCP0CG48 ZNF517-207ENST00000531720 1615 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
UBCP0CG48 TRMT2A-204ENST00000439169 2473 ntTSL 5 BASIC18.39■□□□□ 0.53
UBCP0CG48 MIF-201ENST00000215754 939 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
UBCP0CG48 TAF6L-201ENST00000294168 2116 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
UBCP0CG48 AL161908.1-203ENST00000425370 506 ntTSL 2 BASIC18.39■□□□□ 0.53
UBCP0CG48 AP006621.3-202ENST00000530083 765 ntTSL 3 BASIC18.39■□□□□ 0.53
UBCP0CG48 SSPN-204ENST00000535504 419 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
UBCP0CG48 WWTR1-AS1-202ENST00000479752 1700 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
UBCP0CG48 CELF2-213ENST00000633077 1733 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
UBCP0CG48 RABL2B-206ENST00000395598 2169 ntAPPRIS P3 TSL 1 (best) BASIC18.39■□□□□ 0.53
UBCP0CG48 C12orf76-203ENST00000546651 1755 ntTSL 2 BASIC18.39■□□□□ 0.53
UBCP0CG48 KLC2-207ENST00000421552 2721 ntTSL 5 BASIC18.39■□□□□ 0.53
UBCP0CG48 TPCN2-209ENST00000637504 2736 ntTSL 5 BASIC18.39■□□□□ 0.53
UBCP0CG48 LINC01521-201ENST00000504184 1943 ntBASIC18.39■□□□□ 0.53
UBCP0CG48 AGAP1-205ENST00000409538 6138 ntTSL 5 BASIC18.39■□□□□ 0.53
UBCP0CG48 EPDR1-201ENST00000199448 2599 ntAPPRIS P3 TSL 1 (best) BASIC18.38■□□□□ 0.53
UBCP0CG48 PLD6-201ENST00000321560 2560 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 17.2 ms