Protein–RNA interactions for Protein: P09326

CD48, CD48 antigen, humanhuman

Predictions only

Length 243 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD48P09326 CCDC88B-203ENST00000359902 2326 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
CD48P09326 FAM3A-202ENST00000359889 1712 ntAPPRIS P1 TSL 2 BASIC21.89■■□□□ 1.09
CD48P09326 CSNK1G3-206ENST00000511130 1356 ntTSL 2 BASIC21.88■■□□□ 1.09
CD48P09326 NAPEPLD-208ENST00000427257 1822 ntAPPRIS P1 TSL 2 BASIC21.88■■□□□ 1.09
CD48P09326 PPCS-202ENST00000372560 793 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
CD48P09326 TSPY4-201ENST00000383008 1143 ntAPPRIS ALT2 TSL 5 BASIC21.88■■□□□ 1.09
CD48P09326 AC127029.2-201ENST00000577329 502 ntTSL 3 BASIC21.88■■□□□ 1.09
CD48P09326 POMGNT2-201ENST00000344697 2544 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
CD48P09326 LRRC3B-201ENST00000396641 1696 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
CD48P09326 FNDC10-201ENST00000422725 2085 ntAPPRIS P1 BASIC21.87■■□□□ 1.09
CD48P09326 PGAM5-204ENST00000543955 1773 ntTSL 2 BASIC21.87■■□□□ 1.09
CD48P09326 DUSP7-202ENST00000495880 3340 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
CD48P09326 MYH7B-209ENST00000618182 6197 ntAPPRIS ALT2 TSL 5 BASIC21.87■■□□□ 1.09
CD48P09326 COCH-205ENST00000475087 1997 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
CD48P09326 TEAD2-208ENST00000598810 2191 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
CD48P09326 NPTXR-201ENST00000333039 5784 ntAPPRIS ALT2 TSL 1 (best) BASIC21.87■■□□□ 1.09
CD48P09326 RPL8-201ENST00000262584 1041 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
CD48P09326 MOSPD3-203ENST00000393950 1191 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
CD48P09326 CROT-202ENST00000412227 1213 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
CD48P09326 CDKN2A-210ENST00000530628 748 ntAPPRIS P1 TSL 5 BASIC21.87■■□□□ 1.09
CD48P09326 MRM1-203ENST00000612760 1284 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
CD48P09326 SH3BP2-204ENST00000452765 2265 ntAPPRIS P3 TSL 1 (best) BASIC21.87■■□□□ 1.09
CD48P09326 NOC4L-201ENST00000330579 1632 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
CD48P09326 ILKAP-211ENST00000612675 1335 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
CD48P09326 FAM118B-209ENST00000533050 2402 ntAPPRIS P3 TSL 1 (best) BASIC21.86■■□□□ 1.09
CD48P09326 HHIPL1-202ENST00000357223 2241 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
CD48P09326 HBM-201ENST00000356815 506 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
CD48P09326 PRMT1-221ENST00000610806 1192 ntTSL 3 BASIC21.86■■□□□ 1.09
CD48P09326 VPS13B-204ENST00000441350 1626 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
CD48P09326 ZNF584-201ENST00000306910 2332 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
CD48P09326 MAF1-205ENST00000534585 1754 ntTSL 5 BASIC21.86■■□□□ 1.09
CD48P09326 NUDT10-201ENST00000356450 1917 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
CD48P09326 STX5-203ENST00000394690 1568 ntTSL 5 BASIC21.86■■□□□ 1.09
CD48P09326 TM7SF2-201ENST00000279263 1722 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
CD48P09326 TMC7-205ENST00000569532 2738 ntTSL 2 BASIC21.86■■□□□ 1.09
CD48P09326 VPS29-206ENST00000549578 1523 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
CD48P09326 EPHX3-201ENST00000221730 1822 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
CD48P09326 EPHX3-204ENST00000602233 1805 ntAPPRIS P1 TSL 5 BASIC21.85■■□□□ 1.09
CD48P09326 HSD11B1L-201ENST00000301382 1457 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
CD48P09326 DAPK3-201ENST00000301264 2105 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
CD48P09326 NAE1-203ENST00000379463 1909 ntTSL 2 BASIC21.85■■□□□ 1.09
CD48P09326 FXN-202ENST00000396364 980 ntTSL 5 BASIC21.85■■□□□ 1.09
CD48P09326 LTC4S-202ENST00000401985 486 ntTSL 3 BASIC21.85■■□□□ 1.09
CD48P09326 PRSS22-203ENST00000571228 1037 ntTSL 2 BASIC21.85■■□□□ 1.09
CD48P09326 MAP1LC3A-201ENST00000360668 1574 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
CD48P09326 PAX1-202ENST00000444366 1850 ntAPPRIS ALT2 TSL 2 BASIC21.85■■□□□ 1.09
CD48P09326 OIP5-AS1-202ENST00000501665 1384 ntTSL 2 BASIC21.85■■□□□ 1.09
CD48P09326 MRAS-202ENST00000423968 1803 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
CD48P09326 DNAJA4-202ENST00000394852 3116 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
CD48P09326 RARG-204ENST00000543726 1779 ntTSL 2 BASIC21.84■■□□□ 1.09
CD48P09326 UBE2I-205ENST00000402301 1708 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
CD48P09326 KLC2-207ENST00000421552 2721 ntTSL 5 BASIC21.84■■□□□ 1.09
CD48P09326 JTB-203ENST00000368589 1216 ntTSL 2 BASIC21.84■■□□□ 1.09
CD48P09326 NMRAL1-202ENST00000404295 1233 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
CD48P09326 ZNRF2P3-201ENST00000424200 374 ntBASIC21.84■■□□□ 1.09
CD48P09326 TMEM206-205ENST00000535273 2119 ntTSL 2 BASIC21.84■■□□□ 1.09
CD48P09326 SCN1B-203ENST00000595652 814 ntTSL 2 BASIC21.84■■□□□ 1.09
CD48P09326 DLEU2-208ENST00000621282 3068 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
CD48P09326 GSG1L-202ENST00000395724 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC21.84■■□□□ 1.09
CD48P09326 AL049796.1-201ENST00000565336 1766 ntBASIC21.84■■□□□ 1.09
CD48P09326 GNA11-201ENST00000078429 4147 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
CD48P09326 GSPT1-203ENST00000439887 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC21.83■■□□□ 1.09
CD48P09326 AC092675.2-201ENST00000413274 541 ntTSL 4 BASIC21.83■■□□□ 1.09
CD48P09326 AC027612.3-201ENST00000413684 1047 ntBASIC21.83■■□□□ 1.09
CD48P09326 RPUSD3-206ENST00000433535 1178 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
CD48P09326 ARHGAP24-206ENST00000503995 1273 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
CD48P09326 TPT1-AS1-211ENST00000520622 604 ntTSL 4 BASIC21.83■■□□□ 1.09
CD48P09326 CHTF8-210ENST00000523421 766 ntTSL 3 BASIC21.83■■□□□ 1.09
CD48P09326 AC145207.2-202ENST00000576554 565 ntTSL 5 BASIC21.83■■□□□ 1.09
CD48P09326 AL138963.3-201ENST00000610057 588 ntTSL 4 BASIC21.83■■□□□ 1.09
CD48P09326 CPT2-209ENST00000636935 803 ntTSL 5 BASIC21.83■■□□□ 1.09
CD48P09326 TMEM17-201ENST00000335390 1797 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
CD48P09326 PAQR6-213ENST00000612424 2037 ntTSL 2 BASIC21.83■■□□□ 1.09
CD48P09326 AC243965.2-201ENST00000612576 2671 ntTSL 5 BASIC21.83■■□□□ 1.08
CD48P09326 PARN-205ENST00000539279 1557 ntTSL 2 BASIC21.82■■□□□ 1.08
CD48P09326 MFF-207ENST00000409565 1548 ntTSL 2 BASIC21.82■■□□□ 1.08
CD48P09326 TNIP1-205ENST00000518977 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC21.82■■□□□ 1.08
CD48P09326 TRIM3-202ENST00000359518 3042 ntAPPRIS P1 TSL 5 BASIC21.82■■□□□ 1.08
CD48P09326 LPAR1-201ENST00000358883 2687 ntAPPRIS P2 TSL 2 BASIC21.82■■□□□ 1.08
CD48P09326 CCDC28B-201ENST00000373602 1089 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
CD48P09326 LRRC3C-201ENST00000377924 891 ntAPPRIS P1 TSL 3 BASIC21.82■■□□□ 1.08
CD48P09326 RNF146-206ENST00000480444 843 ntTSL 2 BASIC21.82■■□□□ 1.08
CD48P09326 GLI4-210ENST00000523522 1297 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
CD48P09326 AES-207ENST00000586839 942 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
CD48P09326 UCK2-201ENST00000367879 1375 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
CD48P09326 KCNQ1-202ENST00000335475 2159 ntAPPRIS ALT2 TSL 1 (best) BASIC21.82■■□□□ 1.08
CD48P09326 CHRNA10-204ENST00000534359 1474 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
CD48P09326 FBXO25-203ENST00000352684 2360 ntTSL 5 BASIC21.82■■□□□ 1.08
CD48P09326 CEBPE-201ENST00000206513 1554 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
CD48P09326 ZNF622-201ENST00000308683 1699 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
CD48P09326 ZNF331-202ENST00000411977 2248 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
CD48P09326 AL606970.3-201ENST00000446811 2246 ntTSL 2 BASIC21.82■■□□□ 1.08
CD48P09326 SLAIN1-206ENST00000418532 2855 ntAPPRIS ALT2 TSL 5 BASIC21.81■■□□□ 1.08
CD48P09326 GALK1-201ENST00000225614 1445 ntAPPRIS P1 TSL 2 BASIC21.81■■□□□ 1.08
CD48P09326 AC138649.1-201ENST00000619611 1449 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
CD48P09326 DCK-201ENST00000286648 2716 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
CD48P09326 AEBP2-204ENST00000398864 5099 ntAPPRIS P4 TSL 1 (best) BASIC21.81■■□□□ 1.08
CD48P09326 EIF6-201ENST00000374436 1252 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
CD48P09326 EEF1DP3-203ENST00000566025 782 ntBASIC21.81■■□□□ 1.08
CD48P09326 GSX2-205ENST00000611459 1262 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
Retrieved 100 of 98,524 protein–RNA pairs in 33.1 ms