Protein–RNA interactions for Protein: P04085

PDGFA, Platelet-derived growth factor subunit A, humanhuman

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFAP04085 ZNF784-201ENST00000325351 2021 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
PDGFAP04085 TMEM9B-205ENST00000534025 2083 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
PDGFAP04085 MIPEPP3-201ENST00000412105 444 ntBASIC19.65■□□□□ 0.74
PDGFAP04085 LINC01816-201ENST00000414141 662 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
PDGFAP04085 TERF1P5-201ENST00000477545 1207 ntBASIC19.65■□□□□ 0.74
PDGFAP04085 COL19A1-203ENST00000478620 589 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
PDGFAP04085 C17orf107-202ENST00000521575 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
PDGFAP04085 GGTLC3-201ENST00000619998 968 ntAPPRIS P1 TSL 5 BASIC19.65■□□□□ 0.74
PDGFAP04085 MYO19-221ENST00000620640 1186 ntTSL 2 BASIC19.65■□□□□ 0.74
PDGFAP04085 UBE2E3-201ENST00000392415 1347 ntAPPRIS P1 TSL 3 BASIC19.65■□□□□ 0.74
PDGFAP04085 IRX4-206ENST00000513692 2391 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
PDGFAP04085 ECHDC2-221ENST00000536120 1446 ntTSL 3 BASIC19.65■□□□□ 0.74
PDGFAP04085 ARPP19-201ENST00000249822 5301 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
PDGFAP04085 AC233992.2-201ENST00000531225 1596 ntAPPRIS P1 TSL 2 BASIC19.65■□□□□ 0.74
PDGFAP04085 CBWD6-201ENST00000377391 1792 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
PDGFAP04085 BST1-202ENST00000382346 1993 ntAPPRIS ALT2 TSL 5 BASIC19.64■□□□□ 0.74
PDGFAP04085 ZNF837-202ENST00000597582 1969 ntAPPRIS P1 TSL 2 BASIC19.64■□□□□ 0.74
PDGFAP04085 HAS1-202ENST00000540069 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.74
PDGFAP04085 RABEP2-201ENST00000357573 2175 ntTSL 1 (best) BASIC19.64■□□□□ 0.74
PDGFAP04085 NAA20-201ENST00000310450 920 ntTSL 2 BASIC19.64■□□□□ 0.73
PDGFAP04085 MGST3-205ENST00000367889 1015 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
PDGFAP04085 FNDC11-201ENST00000370097 1119 ntAPPRIS P1 TSL 2 BASIC19.64■□□□□ 0.73
PDGFAP04085 WIPF1-207ENST00000410117 777 ntTSL 3 BASIC19.64■□□□□ 0.73
PDGFAP04085 PHB2-213ENST00000546111 858 ntTSL 2 BASIC19.64■□□□□ 0.73
PDGFAP04085 MIR4758-201ENST00000577688 71 ntBASIC19.64■□□□□ 0.73
PDGFAP04085 ITM2C-210ENST00000620962 501 ntBASIC19.64■□□□□ 0.73
PDGFAP04085 AC013268.1-206ENST00000638368 961 ntBASIC19.64■□□□□ 0.73
PDGFAP04085 AC112229.1-201ENST00000639295 961 ntBASIC19.64■□□□□ 0.73
PDGFAP04085 NAA10-208ENST00000464845 1772 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
PDGFAP04085 HSD11B2-201ENST00000326152 1900 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
PDGFAP04085 NKX2-1-201ENST00000354822 2191 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
PDGFAP04085 UPF3A-201ENST00000351487 2235 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
PDGFAP04085 KLC2-207ENST00000421552 2721 ntTSL 5 BASIC19.64■□□□□ 0.73
PDGFAP04085 DACT3-202ENST00000391916 2834 ntAPPRIS P1 TSL 5 BASIC19.64■□□□□ 0.73
PDGFAP04085 LRRC4B-201ENST00000389201 2958 ntAPPRIS P1 TSL 2 BASIC19.64■□□□□ 0.73
PDGFAP04085 DNAJB11-202ENST00000439351 2398 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
PDGFAP04085 RANBP10-202ENST00000448631 2232 ntTSL 2 BASIC19.63■□□□□ 0.73
PDGFAP04085 SPINT2-202ENST00000454580 1367 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
PDGFAP04085 KLHDC9-201ENST00000368011 1314 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
PDGFAP04085 MED10-201ENST00000255764 1141 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
PDGFAP04085 PRORSD1P-201ENST00000295112 541 ntBASIC19.63■□□□□ 0.73
PDGFAP04085 ZNF644-203ENST00000361321 1253 ntTSL 2 BASIC19.63■□□□□ 0.73
PDGFAP04085 AL390816.2-201ENST00000554252 737 ntTSL 3 BASIC19.63■□□□□ 0.73
PDGFAP04085 PRORSD1P-203ENST00000579162 626 ntTSL 5 BASIC19.63■□□□□ 0.73
PDGFAP04085 UBXN2B-206ENST00000638450 591 ntTSL 5 BASIC19.63■□□□□ 0.73
PDGFAP04085 INAFM2-202ENST00000638170 3052 ntAPPRIS P1 BASIC19.63■□□□□ 0.73
PDGFAP04085 FAM72A-202ENST00000367128 2398 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
PDGFAP04085 FAM72D-201ENST00000400889 2397 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
PDGFAP04085 DIXDC1-205ENST00000529225 1945 ntTSL 5 BASIC19.63■□□□□ 0.73
PDGFAP04085 MFSD7-203ENST00000404286 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
PDGFAP04085 CCDC47-204ENST00000582252 1719 ntTSL 2 BASIC19.62■□□□□ 0.73
PDGFAP04085 MKRN4P-201ENST00000444706 1521 ntBASIC19.62■□□□□ 0.73
PDGFAP04085 GRTP1-203ENST00000375431 1384 ntAPPRIS P3 TSL 1 (best) BASIC19.62■□□□□ 0.73
PDGFAP04085 MAPK9-206ENST00000425491 2266 ntTSL 5 BASIC19.62■□□□□ 0.73
PDGFAP04085 DBP-201ENST00000222122 2229 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
PDGFAP04085 PICK1-202ENST00000404072 2164 ntAPPRIS P1 TSL 2 BASIC19.62■□□□□ 0.73
PDGFAP04085 PRSS56-201ENST00000449534 2157 ntAPPRIS ALT2 TSL 5 BASIC19.62■□□□□ 0.73
PDGFAP04085 PRSS56-203ENST00000617714 2158 ntAPPRIS P2 TSL 5 BASIC19.62■□□□□ 0.73
PDGFAP04085 ACOT8-201ENST00000217455 1168 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
PDGFAP04085 FAM207A-201ENST00000291634 927 ntAPPRIS P3 TSL 1 (best) BASIC19.62■□□□□ 0.73
PDGFAP04085 NAA60-204ENST00000421765 1045 ntTSL 2 BASIC19.62■□□□□ 0.73
PDGFAP04085 PPP1R14BP2-201ENST00000426284 444 ntBASIC19.62■□□□□ 0.73
PDGFAP04085 AC093787.1-201ENST00000450396 207 ntBASIC19.62■□□□□ 0.73
PDGFAP04085 ALKBH6-212ENST00000485128 959 ntTSL 5 BASIC19.62■□□□□ 0.73
PDGFAP04085 AC027451.1-201ENST00000530667 553 ntTSL 4 BASIC19.62■□□□□ 0.73
PDGFAP04085 PLLP-204ENST00000569059 665 ntTSL 3 BASIC19.62■□□□□ 0.73
PDGFAP04085 SIX3-201ENST00000260653 2523 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
PDGFAP04085 TMEM268-202ENST00000374049 4578 ntAPPRIS ALT1 TSL 5 BASIC19.62■□□□□ 0.73
PDGFAP04085 NOC4L-201ENST00000330579 1632 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
PDGFAP04085 P4HA3-202ENST00000427714 2248 ntTSL 2 BASIC19.61■□□□□ 0.73
PDGFAP04085 GPR137-201ENST00000313074 1485 ntTSL 5 BASIC19.61■□□□□ 0.73
PDGFAP04085 GPR137-203ENST00000411458 1495 ntTSL 2 BASIC19.61■□□□□ 0.73
PDGFAP04085 AC137767.1-201ENST00000602918 1920 ntBASIC19.61■□□□□ 0.73
PDGFAP04085 LINC01960-201ENST00000563759 1884 ntBASIC19.61■□□□□ 0.73
PDGFAP04085 CTGF-201ENST00000367976 2339 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
PDGFAP04085 DTYMK-201ENST00000305784 1232 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
PDGFAP04085 ANKRD10-202ENST00000310847 1193 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
PDGFAP04085 KRT18P29-201ENST00000397031 1267 ntBASIC19.61■□□□□ 0.73
PDGFAP04085 RAMP1-202ENST00000403885 650 ntTSL 3 BASIC19.61■□□□□ 0.73
PDGFAP04085 EIF4E3-203ENST00000421769 777 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
PDGFAP04085 AL136982.7-201ENST00000609363 465 ntTSL 4 BASIC19.61■□□□□ 0.73
PDGFAP04085 GDF6-203ENST00000621429 1179 ntTSL 5 BASIC19.61■□□□□ 0.73
PDGFAP04085 ZNF354A-201ENST00000335815 2484 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
PDGFAP04085 APBB3-204ENST00000358580 2020 ntTSL 5 BASIC19.61■□□□□ 0.73
PDGFAP04085 B3GALNT2-202ENST00000366600 2015 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
PDGFAP04085 ACSF2-207ENST00000504392 1881 ntTSL 2 BASIC19.6■□□□□ 0.73
PDGFAP04085 NCK2-201ENST00000233154 2683 ntAPPRIS P1 TSL 5 BASIC19.6■□□□□ 0.73
PDGFAP04085 MTAP-204ENST00000460874 1434 ntTSL 2 BASIC19.6■□□□□ 0.73
PDGFAP04085 RSPO1-201ENST00000356545 2621 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
PDGFAP04085 ANKRD28-201ENST00000399451 6564 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
PDGFAP04085 SLC52A2-211ENST00000532887 2147 ntAPPRIS P1 TSL 5 BASIC19.6■□□□□ 0.73
PDGFAP04085 ZYX-201ENST00000322764 2493 ntAPPRIS P2 TSL 1 (best) BASIC19.6■□□□□ 0.73
PDGFAP04085 TSPAN17-207ENST00000508164 2457 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
PDGFAP04085 SEPT5-210ENST00000455784 2070 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
PDGFAP04085 CTSF-201ENST00000310325 2035 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
PDGFAP04085 MRPL12-201ENST00000333676 1028 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
PDGFAP04085 SDHC-201ENST00000342751 1127 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
PDGFAP04085 CUEDC2-201ENST00000369937 1191 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
PDGFAP04085 FXN-202ENST00000396364 980 ntTSL 5 BASIC19.6■□□□□ 0.73
PDGFAP04085 DHRS4-202ENST00000397074 785 ntTSL 5 BASIC19.6■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 20.5 ms