Protein–RNA interactions for Protein: P01906

HLA-DQA2, HLA class II histocompatibility antigen, DQ alpha 2 chain, humanhuman

Predictions only

Length 255 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQA2P01906 PLCB2-204ENST00000557821 4517 ntAPPRIS ALT1 TSL 1 (best) BASIC18.89■□□□□ 0.61
HLA-DQA2P01906 DNAJA4-202ENST00000394852 3116 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
HLA-DQA2P01906 BCL11B-203ENST00000443726 2599 ntAPPRIS ALT2 TSL 5 BASIC18.88■□□□□ 0.61
HLA-DQA2P01906 PPP3CC-203ENST00000397775 2094 ntTSL 2 BASIC18.88■□□□□ 0.61
HLA-DQA2P01906 RGS20-202ENST00000297313 2104 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
HLA-DQA2P01906 PTPRE-201ENST00000254667 5331 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
HLA-DQA2P01906 LYPD2-201ENST00000359228 594 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
HLA-DQA2P01906 CKLF-205ENST00000417030 628 ntAPPRIS ALT2 TSL 4 BASIC18.88■□□□□ 0.61
HLA-DQA2P01906 AP006621.3-202ENST00000530083 765 ntTSL 3 BASIC18.88■□□□□ 0.61
HLA-DQA2P01906 AC024257.2-201ENST00000549699 147 ntBASIC18.88■□□□□ 0.61
HLA-DQA2P01906 UNC5B-201ENST00000335350 6841 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
HLA-DQA2P01906 CENPS-CORT-201ENST00000400900 1469 ntTSL 2 BASIC18.88■□□□□ 0.61
HLA-DQA2P01906 POU3F2-201ENST00000328345 4879 ntAPPRIS P1 BASIC18.88■□□□□ 0.61
HLA-DQA2P01906 SETD6-202ENST00000310682 2042 ntAPPRIS P3 TSL 2 BASIC18.88■□□□□ 0.61
HLA-DQA2P01906 C1QL4-201ENST00000334221 2071 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
HLA-DQA2P01906 SLC1A6-203ENST00000544886 2420 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
HLA-DQA2P01906 PCSK6-214ENST00000611716 4409 ntAPPRIS P4 TSL 1 (best) BASIC18.87■□□□□ 0.61
HLA-DQA2P01906 RAB3A-201ENST00000222256 1528 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
HLA-DQA2P01906 PHPT1-201ENST00000247665 890 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
HLA-DQA2P01906 VRK2-201ENST00000340157 1888 ntAPPRIS P3 TSL 1 (best) BASIC18.87■□□□□ 0.61
HLA-DQA2P01906 S100A6-201ENST00000368719 665 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
HLA-DQA2P01906 FPGS-202ENST00000373228 1383 ntTSL 5 BASIC18.87■□□□□ 0.61
HLA-DQA2P01906 CCDC107-203ENST00000378407 899 ntAPPRIS ALT2 TSL 2 BASIC18.87■□□□□ 0.61
HLA-DQA2P01906 KRTAP5-1-201ENST00000382171 942 ntAPPRIS P1 BASIC18.87■□□□□ 0.61
HLA-DQA2P01906 POLR2F-203ENST00000407936 582 ntTSL 3 BASIC18.87■□□□□ 0.61
HLA-DQA2P01906 TMEM121-202ENST00000431372 1519 ntAPPRIS P1 TSL 5 BASIC18.87■□□□□ 0.61
HLA-DQA2P01906 POLR2F-207ENST00000460648 518 ntTSL 4 BASIC18.87■□□□□ 0.61
HLA-DQA2P01906 CFAP97-205ENST00000514798 2895 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
HLA-DQA2P01906 GJD3-201ENST00000578689 885 ntAPPRIS P1 BASIC18.87■□□□□ 0.61
HLA-DQA2P01906 IKBKG-206ENST00000594239 2299 ntAPPRIS P3 TSL 1 (best) BASIC18.87■□□□□ 0.61
HLA-DQA2P01906 ZNF584-205ENST00000596281 575 ntTSL 2 BASIC18.87■□□□□ 0.61
HLA-DQA2P01906 AC233992.3-201ENST00000607491 485 ntBASIC18.87■□□□□ 0.61
HLA-DQA2P01906 AC135279.3-201ENST00000610945 1311 ntBASIC18.87■□□□□ 0.61
HLA-DQA2P01906 FAM117B-201ENST00000392238 5763 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
HLA-DQA2P01906 RELA-201ENST00000308639 2681 ntAPPRIS ALT1 TSL 1 (best) BASIC18.87■□□□□ 0.61
HLA-DQA2P01906 OSBPL10-204ENST00000438237 2624 ntAPPRIS ALT2 TSL 2 BASIC18.87■□□□□ 0.61
HLA-DQA2P01906 KCNN4-201ENST00000262888 2240 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
HLA-DQA2P01906 LSM14A-202ENST00000540746 2152 ntTSL 2 BASIC18.86■□□□□ 0.61
HLA-DQA2P01906 AC003102.1-202ENST00000563394 1796 ntBASIC18.86■□□□□ 0.61
HLA-DQA2P01906 CADPS2-202ENST00000334010 6045 ntAPPRIS ALT2 TSL 5 BASIC18.86■□□□□ 0.61
HLA-DQA2P01906 CAPG-201ENST00000263867 1442 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
HLA-DQA2P01906 CSPG5-201ENST00000264723 4080 ntAPPRIS P3 TSL 1 (best) BASIC18.86■□□□□ 0.61
HLA-DQA2P01906 RUFY1-201ENST00000319449 2646 ntAPPRIS P3 TSL 1 (best) BASIC18.86■□□□□ 0.61
HLA-DQA2P01906 NAA38-201ENST00000333775 999 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
HLA-DQA2P01906 GADD45G-202ENST00000375769 977 ntTSL 2 BASIC18.86■□□□□ 0.61
HLA-DQA2P01906 IGHV3-20-201ENST00000390606 415 ntAPPRIS P1 BASIC18.86■□□□□ 0.61
HLA-DQA2P01906 PRMT2-204ENST00000397628 954 ntTSL 2 BASIC18.86■□□□□ 0.61
HLA-DQA2P01906 NKX2-5-202ENST00000424406 1124 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
HLA-DQA2P01906 CCER2-201ENST00000571838 1057 ntAPPRIS P2 TSL 5 BASIC18.86■□□□□ 0.61
HLA-DQA2P01906 PLEKHJ1-213ENST00000591099 1092 ntTSL 2 BASIC18.86■□□□□ 0.61
HLA-DQA2P01906 ZNF846-212ENST00000592859 1206 ntTSL 2 BASIC18.86■□□□□ 0.61
HLA-DQA2P01906 SLC26A5-209ENST00000393735 1947 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
HLA-DQA2P01906 ZNF446-208ENST00000622313 1884 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
HLA-DQA2P01906 MEIS2-207ENST00000557796 2666 ntTSL 5 BASIC18.86■□□□□ 0.61
HLA-DQA2P01906 C16orf59-201ENST00000361837 1662 ntAPPRIS P2 TSL 1 (best) BASIC18.85■□□□□ 0.61
HLA-DQA2P01906 ZNF419-203ENST00000354197 1569 ntTSL 5 BASIC18.85■□□□□ 0.61
HLA-DQA2P01906 KDELR1-203ENST00000597017 1594 ntTSL 2 BASIC18.85■□□□□ 0.61
HLA-DQA2P01906 ADARB1-201ENST00000348831 6882 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
HLA-DQA2P01906 DOCK5-208ENST00000481100 2166 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
HLA-DQA2P01906 KLHDC10-201ENST00000335420 6437 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
HLA-DQA2P01906 DYM-203ENST00000442713 2147 ntTSL 2 BASIC18.85■□□□□ 0.61
HLA-DQA2P01906 AL161908.1-203ENST00000425370 506 ntTSL 2 BASIC18.85■□□□□ 0.61
HLA-DQA2P01906 AC068580.1-201ENST00000446489 252 ntTSL 3 BASIC18.85■□□□□ 0.61
HLA-DQA2P01906 AL357078.1-201ENST00000448344 310 ntTSL 4 BASIC18.85■□□□□ 0.61
HLA-DQA2P01906 CDKN2A-206ENST00000494262 989 ntTSL 3 BASIC18.85■□□□□ 0.61
HLA-DQA2P01906 TUSC3-209ENST00000509380 1266 ntTSL 5 BASIC18.85■□□□□ 0.61
HLA-DQA2P01906 NRL-205ENST00000560550 788 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
HLA-DQA2P01906 TRIM3-202ENST00000359518 3042 ntAPPRIS P1 TSL 5 BASIC18.85■□□□□ 0.61
HLA-DQA2P01906 EEF1D-204ENST00000423316 2378 ntAPPRIS P4 TSL 5 BASIC18.85■□□□□ 0.61
HLA-DQA2P01906 ANKRD13D-202ENST00000447274 2881 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
HLA-DQA2P01906 TMEM255B-202ENST00000375353 6100 ntAPPRIS P2 TSL 1 (best) BASIC18.85■□□□□ 0.61
HLA-DQA2P01906 IMPAD1-201ENST00000262644 7199 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
HLA-DQA2P01906 PEX5-204ENST00000412720 2105 ntTSL 2 BASIC18.85■□□□□ 0.61
HLA-DQA2P01906 CDC14A-203ENST00000370124 1883 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
HLA-DQA2P01906 EPHX3-204ENST00000602233 1805 ntAPPRIS P1 TSL 5 BASIC18.84■□□□□ 0.61
HLA-DQA2P01906 AC243965.2-201ENST00000612576 2671 ntTSL 5 BASIC18.84■□□□□ 0.61
HLA-DQA2P01906 RASGEF1C-201ENST00000361132 2243 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
HLA-DQA2P01906 ACADVL-202ENST00000350303 2191 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
HLA-DQA2P01906 GGA2-211ENST00000567468 1713 ntTSL 2 BASIC18.84■□□□□ 0.61
HLA-DQA2P01906 AL024507.2-201ENST00000606070 2574 ntBASIC18.84■□□□□ 0.61
HLA-DQA2P01906 BCKDK-201ENST00000219794 2128 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
HLA-DQA2P01906 MGAT5B-207ENST00000565675 872 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
HLA-DQA2P01906 DLG3-202ENST00000374355 5074 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
HLA-DQA2P01906 FBXO25-203ENST00000352684 2360 ntTSL 5 BASIC18.84■□□□□ 0.61
HLA-DQA2P01906 NEU4-204ENST00000405370 1907 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
HLA-DQA2P01906 SPOP-206ENST00000504102 1865 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
HLA-DQA2P01906 FARSA-201ENST00000314606 1814 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
HLA-DQA2P01906 TTYH1-203ENST00000376531 1763 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
HLA-DQA2P01906 CHN1-203ENST00000409156 1761 ntTSL 2 BASIC18.83■□□□□ 0.61
HLA-DQA2P01906 FAM3A-202ENST00000359889 1712 ntAPPRIS P1 TSL 2 BASIC18.83■□□□□ 0.61
HLA-DQA2P01906 CCKBR-206ENST00000532715 1734 ntTSL 3 BASIC18.83■□□□□ 0.61
HLA-DQA2P01906 ZNHIT2-201ENST00000310597 1306 ntAPPRIS P1 BASIC18.83■□□□□ 0.61
HLA-DQA2P01906 GCH1-202ENST00000395514 1977 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
HLA-DQA2P01906 PMPCA-203ENST00000399219 1987 ntTSL 2 BASIC18.83■□□□□ 0.61
HLA-DQA2P01906 MBD3-201ENST00000156825 5518 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
HLA-DQA2P01906 C20orf144-201ENST00000375222 571 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
HLA-DQA2P01906 CREB3L2-203ENST00000452463 1105 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
HLA-DQA2P01906 NRIP3-203ENST00000531090 980 ntTSL 2 BASIC18.83■□□□□ 0.6
HLA-DQA2P01906 CTAG1A-201ENST00000593606 993 ntTSL 5 BASIC18.83■□□□□ 0.6
HLA-DQA2P01906 AC008764.7-201ENST00000593779 1081 ntBASIC18.83■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 34.6 ms