Protein–RNA interactions for Protein: O60245

PCDH7, Protocadherin-7, humanhuman

Predictions only

Length 1,069 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH7O60245 STOML2-202ENST00000452248 1296 ntTSL 2 BASIC20.13■□□□□ 0.81
PCDH7O60245 NKX2-2-AS1-201ENST00000549659 638 ntTSL 5 BASIC20.13■□□□□ 0.81
PCDH7O60245 AC012414.1-201ENST00000556676 535 ntBASIC20.13■□□□□ 0.81
PCDH7O60245 TRAF4-217ENST00000618771 543 ntTSL 5 BASIC20.13■□□□□ 0.81
PCDH7O60245 STOML2-205ENST00000619795 1293 ntTSL 3 BASIC20.13■□□□□ 0.81
PCDH7O60245 RITA1-201ENST00000548278 2053 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
PCDH7O60245 AP000662.2-202ENST00000530595 2790 ntTSL 2 BASIC20.13■□□□□ 0.81
PCDH7O60245 RASSF1-203ENST00000359365 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC20.13■□□□□ 0.81
PCDH7O60245 NCKAP1-201ENST00000360982 4989 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
PCDH7O60245 AC243965.2-201ENST00000612576 2671 ntTSL 5 BASIC20.13■□□□□ 0.81
PCDH7O60245 KCNH6-203ENST00000580652 1703 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
PCDH7O60245 C10orf55-202ENST00000412307 2360 ntAPPRIS P1 TSL 5 BASIC20.13■□□□□ 0.81
PCDH7O60245 GNB1L-202ENST00000403325 1699 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
PCDH7O60245 HSD11B1L-218ENST00000581773 1687 ntAPPRIS P3 TSL 1 (best) BASIC20.13■□□□□ 0.81
PCDH7O60245 ADRM1-204ENST00000491935 1530 ntAPPRIS P1 TSL 5 BASIC20.12■□□□□ 0.81
PCDH7O60245 TRIP13-201ENST00000166345 2672 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
PCDH7O60245 UBE2Q1-201ENST00000292211 3210 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
PCDH7O60245 ZNF746-203ENST00000461958 5051 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
PCDH7O60245 FAM66D-201ENST00000434078 918 ntTSL 5 BASIC20.12■□□□□ 0.81
PCDH7O60245 PGAM5-204ENST00000543955 1773 ntTSL 2 BASIC20.12■□□□□ 0.81
PCDH7O60245 ASAP2-202ENST00000315273 5582 ntAPPRIS ALT2 TSL 1 (best) BASIC20.12■□□□□ 0.81
PCDH7O60245 TMEM125-201ENST00000432792 1850 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
PCDH7O60245 CLN8-213ENST00000637156 1897 ntAPPRIS P1 TSL 5 BASIC20.11■□□□□ 0.81
PCDH7O60245 UBALD1-201ENST00000283474 1413 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
PCDH7O60245 NAPEPLD-208ENST00000427257 1822 ntAPPRIS P1 TSL 2 BASIC20.11■□□□□ 0.81
PCDH7O60245 AL606970.3-201ENST00000446811 2246 ntTSL 2 BASIC20.11■□□□□ 0.81
PCDH7O60245 RAB24-202ENST00000303270 1385 ntTSL 2 BASIC20.11■□□□□ 0.81
PCDH7O60245 GSG1L-202ENST00000395724 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC20.11■□□□□ 0.81
PCDH7O60245 RAB1A-202ENST00000409751 1333 ntTSL 5 BASIC20.11■□□□□ 0.81
PCDH7O60245 DHRS2-202ENST00000344777 1678 ntAPPRIS ALT2 TSL 1 (best) BASIC20.11■□□□□ 0.81
PCDH7O60245 P2RX4-202ENST00000337233 2032 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
PCDH7O60245 AL354811.1-201ENST00000610286 706 ntBASIC20.11■□□□□ 0.81
PCDH7O60245 SRRM2-231ENST00000630499 1207 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
PCDH7O60245 RELA-201ENST00000308639 2681 ntAPPRIS ALT1 TSL 1 (best) BASIC20.11■□□□□ 0.81
PCDH7O60245 GRIK4-205ENST00000527524 5861 ntAPPRIS P1 TSL 2 BASIC20.11■□□□□ 0.81
PCDH7O60245 PARN-205ENST00000539279 1557 ntTSL 2 BASIC20.11■□□□□ 0.81
PCDH7O60245 LYPD1-202ENST00000397463 1891 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
PCDH7O60245 GRINA-202ENST00000395068 1814 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
PCDH7O60245 NTNG2-202ENST00000393229 4792 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
PCDH7O60245 CHRNA10-204ENST00000534359 1474 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
PCDH7O60245 NARF-205ENST00000412079 1760 ntTSL 5 BASIC20.11■□□□□ 0.81
PCDH7O60245 PACRGL-227ENST00000513459 1773 ntTSL 5 BASIC20.11■□□□□ 0.81
PCDH7O60245 EEF1D-204ENST00000423316 2378 ntAPPRIS P4 TSL 5 BASIC20.1■□□□□ 0.81
PCDH7O60245 CIZ1-203ENST00000357558 2907 ntAPPRIS ALT2 TSL 5 BASIC20.1■□□□□ 0.81
PCDH7O60245 OIP5-AS1-202ENST00000501665 1384 ntTSL 2 BASIC20.1■□□□□ 0.81
PCDH7O60245 LRRC3B-201ENST00000396641 1696 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
PCDH7O60245 ZFAND6-224ENST00000618205 1659 ntAPPRIS P1 TSL 5 BASIC20.1■□□□□ 0.81
PCDH7O60245 DMRT2-203ENST00000358146 1965 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
PCDH7O60245 DAZAP2-201ENST00000412716 2598 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
PCDH7O60245 ARPC5L-201ENST00000259477 1325 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
PCDH7O60245 PAFAH1B2-205ENST00000529887 1056 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
PCDH7O60245 AC005837.3-201ENST00000612163 286 ntBASIC20.1■□□□□ 0.81
PCDH7O60245 TMEM17-201ENST00000335390 1797 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
PCDH7O60245 SLC13A3-204ENST00000413164 2008 ntTSL 2 BASIC20.1■□□□□ 0.81
PCDH7O60245 PDXDC1-205ENST00000535621 2048 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
PCDH7O60245 YBX3-202ENST00000279550 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC20.1■□□□□ 0.81
PCDH7O60245 ACADVL-202ENST00000350303 2191 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
PCDH7O60245 PNMA2-204ENST00000522362 4965 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
PCDH7O60245 ALX3-201ENST00000369792 1859 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
PCDH7O60245 IRX4-206ENST00000513692 2391 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
PCDH7O60245 DACH1-201ENST00000611519 4789 ntAPPRIS ALT2 TSL 1 (best) BASIC20.09■□□□□ 0.81
PCDH7O60245 CEBPE-201ENST00000206513 1554 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
PCDH7O60245 TPM1-208ENST00000404484 1568 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
PCDH7O60245 ORAI3-201ENST00000318663 2206 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
PCDH7O60245 SEPT5-209ENST00000438754 2241 ntTSL 2 BASIC20.09■□□□□ 0.81
PCDH7O60245 HYI-206ENST00000372434 1025 ntTSL 5 BASIC20.09■□□□□ 0.81
PCDH7O60245 NGEF-203ENST00000409079 1022 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
PCDH7O60245 AL355877.1-204ENST00000451482 1078 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
PCDH7O60245 MED14OS-201ENST00000456333 900 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
PCDH7O60245 RHOF-204ENST00000537265 699 ntTSL 2 BASIC20.09■□□□□ 0.81
PCDH7O60245 FBXO33-202ENST00000554190 534 ntTSL 3 BASIC20.09■□□□□ 0.81
PCDH7O60245 SOX3-201ENST00000370536 2132 ntAPPRIS P1 BASIC20.09■□□□□ 0.81
PCDH7O60245 ANKRD53-204ENST00000457410 1671 ntTSL 5 BASIC20.09■□□□□ 0.81
PCDH7O60245 MTCL1-201ENST00000306329 5718 ntAPPRIS ALT2 TSL 5 BASIC20.09■□□□□ 0.81
PCDH7O60245 GPC1-202ENST00000420138 1835 ntTSL 5 BASIC20.09■□□□□ 0.81
PCDH7O60245 MAP1LC3A-201ENST00000360668 1574 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
PCDH7O60245 STX5-203ENST00000394690 1568 ntTSL 5 BASIC20.08■□□□□ 0.81
PCDH7O60245 CNNM4-201ENST00000377075 4800 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
PCDH7O60245 ARHGEF7-202ENST00000317133 4361 ntAPPRIS ALT2 TSL 1 (best) BASIC20.08■□□□□ 0.81
PCDH7O60245 ANKRD13D-202ENST00000447274 2881 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
PCDH7O60245 FIP1L1-201ENST00000306932 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC20.08■□□□□ 0.81
PCDH7O60245 NOXA1-202ENST00000392815 1464 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
PCDH7O60245 C1QL1-201ENST00000253407 1295 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
PCDH7O60245 STOML2-201ENST00000356493 1278 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
PCDH7O60245 LIN7B-202ENST00000391864 582 ntTSL 3 BASIC20.08■□□□□ 0.81
PCDH7O60245 FAIM-203ENST00000393034 927 ntAPPRIS P3 TSL 2 BASIC20.08■□□□□ 0.81
PCDH7O60245 STOX2-205ENST00000513034 807 ntTSL 3 BASIC20.08■□□□□ 0.81
PCDH7O60245 AC005775.1-201ENST00000592413 850 ntTSL 5 BASIC20.08■□□□□ 0.81
PCDH7O60245 AP2S1-203ENST00000593442 636 ntTSL 2 BASIC20.08■□□□□ 0.81
PCDH7O60245 ZBED3-201ENST00000255198 6172 ntAPPRIS P2 TSL 1 (best) BASIC20.08■□□□□ 0.81
PCDH7O60245 EPHX3-201ENST00000221730 1822 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
PCDH7O60245 LINC00969-219ENST00000453324 1439 ntTSL 1 (best) BASIC20.08■□□□□ 0.8
PCDH7O60245 ECHDC2-221ENST00000536120 1446 ntTSL 3 BASIC20.08■□□□□ 0.8
PCDH7O60245 RNF38-205ENST00000377877 1974 ntTSL 2 BASIC20.08■□□□□ 0.8
PCDH7O60245 PPP4R2-201ENST00000356692 4984 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
PCDH7O60245 TRIB3-201ENST00000217233 2499 ntAPPRIS P3 TSL 1 (best) BASIC20.08■□□□□ 0.8
PCDH7O60245 ASCL2-201ENST00000331289 1852 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
PCDH7O60245 ZNF331-202ENST00000411977 2248 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
PCDH7O60245 NGLY1-204ENST00000396649 2024 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
PCDH7O60245 DISC1-212ENST00000535983 2505 ntAPPRIS ALT2 TSL 1 (best) BASIC20.07■□□□□ 0.8
Retrieved 100 of 98,524 protein–RNA pairs in 19.9 ms