Protein–RNA interactions for Protein: O60232

SSSCA1, Sjoegren syndrome/scleroderma autoantigen 1, humanhuman

Predictions only

Length 199 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1O60232 RBM42-206ENST00000592202 1469 ntTSL 5 BASIC17.16■□□□□ 0.34
SSSCA1O60232 ADM-207ENST00000530439 1839 ntTSL 2 BASIC17.16■□□□□ 0.34
SSSCA1O60232 NUDT16L1-202ENST00000405142 2040 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
SSSCA1O60232 CAMKK2-208ENST00000412367 2006 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
SSSCA1O60232 PDXDC1-205ENST00000535621 2048 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
SSSCA1O60232 NAT8L-201ENST00000331662 5571 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
SSSCA1O60232 AC021242.3-201ENST00000607598 1377 ntBASIC17.15■□□□□ 0.34
SSSCA1O60232 SPAST-203ENST00000615843 5212 ntAPPRIS P4 TSL 1 (best) BASIC17.15■□□□□ 0.34
SSSCA1O60232 PEX5-204ENST00000412720 2105 ntTSL 2 BASIC17.15■□□□□ 0.34
SSSCA1O60232 IRS2-201ENST00000375856 8138 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
SSSCA1O60232 HPCAL1-201ENST00000307845 1751 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
SSSCA1O60232 TMEM17-201ENST00000335390 1797 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
SSSCA1O60232 FAM129C-212ENST00000601861 2180 ntAPPRIS ALT2 TSL 2 BASIC17.15■□□□□ 0.34
SSSCA1O60232 NBPF9-209ENST00000621645 5632 ntAPPRIS ALT2 TSL 2 BASIC17.15■□□□□ 0.34
SSSCA1O60232 SDHAP1-204ENST00000427415 559 ntTSL 4 BASIC17.15■□□□□ 0.34
SSSCA1O60232 IGFBP7-203ENST00000514062 1251 ntAPPRIS ALT2 TSL 2 BASIC17.15■□□□□ 0.34
SSSCA1O60232 LSM7-204ENST00000587502 575 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
SSSCA1O60232 HNRNPUL1-222ENST00000617774 451 ntTSL 5 BASIC17.15■□□□□ 0.34
SSSCA1O60232 GABARAPL3-202ENST00000624044 1851 ntBASIC17.15■□□□□ 0.34
SSSCA1O60232 CRHR1-203ENST00000339069 2490 ntTSL 2 BASIC17.15■□□□□ 0.34
SSSCA1O60232 C18orf25-204ENST00000615553 2329 ntTSL 5 BASIC17.15■□□□□ 0.34
SSSCA1O60232 WDSUB1-202ENST00000359774 1912 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
SSSCA1O60232 WWTR1-AS1-202ENST00000479752 1700 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
SSSCA1O60232 JMJD1C-AS1-201ENST00000609436 1335 ntBASIC17.15■□□□□ 0.34
SSSCA1O60232 DLG3-202ENST00000374355 5074 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
SSSCA1O60232 TEAD2-208ENST00000598810 2191 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
SSSCA1O60232 HOXB7-201ENST00000239165 1371 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
SSSCA1O60232 ALDH6A1-201ENST00000350259 1869 ntAPPRIS ALT2 TSL 2 BASIC17.14■□□□□ 0.33
SSSCA1O60232 FBXO31-207ENST00000618298 1871 ntTSL 5 BASIC17.14■□□□□ 0.33
SSSCA1O60232 GAL3ST3-201ENST00000312006 2133 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
SSSCA1O60232 TMEM5-201ENST00000261234 1918 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
SSSCA1O60232 NR2F2-204ENST00000453270 1712 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
SSSCA1O60232 GUK1-208ENST00000366728 842 ntTSL 2 BASIC17.14■□□□□ 0.33
SSSCA1O60232 LRRK1-208ENST00000532029 1241 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
SSSCA1O60232 ACYP1-205ENST00000555463 789 ntTSL 2 BASIC17.14■□□□□ 0.33
SSSCA1O60232 SCUBE1-208ENST00000615096 1119 ntTSL 2 BASIC17.14■□□□□ 0.33
SSSCA1O60232 CYP21A1P-201ENST00000342991 1971 ntTSL 3 BASIC17.14■□□□□ 0.33
SSSCA1O60232 GMPPB-202ENST00000308388 1582 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
SSSCA1O60232 MESP2-201ENST00000341735 1552 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
SSSCA1O60232 NR1D2-201ENST00000312521 5258 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
SSSCA1O60232 CRTC1-203ENST00000594658 2384 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
SSSCA1O60232 GNA14-201ENST00000341700 2482 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
SSSCA1O60232 DCBLD2-201ENST00000326840 6122 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
SSSCA1O60232 APBB3-203ENST00000357560 2218 ntAPPRIS P3 TSL 5 BASIC17.13■□□□□ 0.33
SSSCA1O60232 AP005212.1-201ENST00000581547 1997 ntBASIC17.13■□□□□ 0.33
SSSCA1O60232 LYN-202ENST00000519728 2297 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
SSSCA1O60232 LSM11-201ENST00000286307 6584 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
SSSCA1O60232 EOMES-202ENST00000449599 2829 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
SSSCA1O60232 SDHAF3-202ENST00000432641 2060 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
SSSCA1O60232 MZF1-203ENST00000594234 2385 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
SSSCA1O60232 AL031848.2-201ENST00000607670 837 ntBASIC17.13■□□□□ 0.33
SSSCA1O60232 AC093390.2-201ENST00000638628 1007 ntTSL 5 BASIC17.13■□□□□ 0.33
SSSCA1O60232 SACM1L-202ENST00000418611 2164 ntTSL 2 BASIC17.13■□□□□ 0.33
SSSCA1O60232 BRD9-202ENST00000467963 2156 ntAPPRIS P1 TSL 2 BASIC17.13■□□□□ 0.33
SSSCA1O60232 KLC1-208ENST00000452929 2453 ntTSL 5 BASIC17.13■□□□□ 0.33
SSSCA1O60232 FAM110A-206ENST00000541082 1614 ntAPPRIS P1 TSL 3 BASIC17.13■□□□□ 0.33
SSSCA1O60232 WDR90-201ENST00000293879 5488 ntAPPRIS P2 TSL 5 BASIC17.13■□□□□ 0.33
SSSCA1O60232 HNRNPLL-204ENST00000409328 1908 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
SSSCA1O60232 PIF1-202ENST00000333425 2278 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
SSSCA1O60232 USP21-203ENST00000368002 2342 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
SSSCA1O60232 PRR16-202ENST00000407149 1747 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
SSSCA1O60232 UBALD1-201ENST00000283474 1413 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
SSSCA1O60232 MEIS3-202ENST00000441740 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
SSSCA1O60232 FAM47E-201ENST00000424749 1484 ntAPPRIS P3 TSL 5 BASIC17.12■□□□□ 0.33
SSSCA1O60232 PAN3-201ENST00000380958 2833 ntAPPRIS P2 TSL 5 BASIC17.12■□□□□ 0.33
SSSCA1O60232 E4F1-201ENST00000301727 2573 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
SSSCA1O60232 NDUFV2-201ENST00000318388 930 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
SSSCA1O60232 FAM66C-205ENST00000456135 1216 ntTSL 5 BASIC17.12■□□□□ 0.33
SSSCA1O60232 BRD4-212ENST00000630599 726 ntTSL 2 BASIC17.12■□□□□ 0.33
SSSCA1O60232 PLCD1-201ENST00000334661 2769 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
SSSCA1O60232 PDLIM3-203ENST00000284771 1672 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
SSSCA1O60232 DUSP2-201ENST00000288943 1688 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
SSSCA1O60232 AC073314.1-201ENST00000568729 2216 ntBASIC17.12■□□□□ 0.33
SSSCA1O60232 GPC1-202ENST00000420138 1835 ntTSL 5 BASIC17.12■□□□□ 0.33
SSSCA1O60232 NR1H2-204ENST00000593926 1828 ntAPPRIS P2 TSL 5 BASIC17.12■□□□□ 0.33
SSSCA1O60232 SUSD1-204ENST00000374270 3124 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
SSSCA1O60232 LYPD1-202ENST00000397463 1891 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
SSSCA1O60232 ANKRD16-203ENST00000380094 2738 ntAPPRIS P1 TSL 2 BASIC17.12■□□□□ 0.33
SSSCA1O60232 SAE1-203ENST00000413379 2313 ntTSL 2 BASIC17.12■□□□□ 0.33
SSSCA1O60232 MAPK9-202ENST00000347470 1509 ntTSL 5 BASIC17.11■□□□□ 0.33
SSSCA1O60232 CDAN1-201ENST00000356231 4637 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
SSSCA1O60232 MIS18A-201ENST00000290130 1575 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
SSSCA1O60232 MFSD7-209ENST00000515118 1556 ntTSL 5 BASIC17.11■□□□□ 0.33
SSSCA1O60232 HNRNPAB-201ENST00000355836 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
SSSCA1O60232 FBXL19-207ENST00000565690 2570 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
SSSCA1O60232 HS3ST4-201ENST00000331351 3203 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
SSSCA1O60232 OSCAR-206ENST00000391760 629 ntTSL 2 BASIC17.11■□□□□ 0.33
SSSCA1O60232 WBP1-203ENST00000409737 1110 ntAPPRIS ALT1 TSL 5 BASIC17.11■□□□□ 0.33
SSSCA1O60232 BX664725.1-201ENST00000438252 379 ntBASIC17.11■□□□□ 0.33
SSSCA1O60232 FAM120C-203ENST00000477084 1140 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
SSSCA1O60232 ILDR2-208ENST00000529387 1238 ntTSL 5 BASIC17.11■□□□□ 0.33
SSSCA1O60232 AL590094.1-201ENST00000635581 706 ntTSL 2 BASIC17.11■□□□□ 0.33
SSSCA1O60232 SCOC-207ENST00000506597 1838 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
SSSCA1O60232 SQLE-206ENST00000523430 1879 ntTSL 2 BASIC17.11■□□□□ 0.33
SSSCA1O60232 SENP5-204ENST00000445299 2491 ntTSL 2 BASIC17.11■□□□□ 0.33
SSSCA1O60232 DISC1-202ENST00000317586 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
SSSCA1O60232 TLX3-201ENST00000296921 1493 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
SSSCA1O60232 CSPG5-203ENST00000456150 2089 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
SSSCA1O60232 MFSD3-201ENST00000301327 1548 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
SSSCA1O60232 PPFIA1-201ENST00000253925 5234 ntAPPRIS P4 TSL 1 (best) BASIC17.11■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 19.2 ms