Protein–RNA interactions for Protein: O43623

SNAI2, Zinc finger protein SNAI2, humanhuman

Predictions only

Length 268 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNAI2O43623 NOM1-201ENST00000275820 6077 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
SNAI2O43623 ENGASE-205ENST00000579016 2579 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
SNAI2O43623 EVX2-201ENST00000308618 4203 ntAPPRIS P1 TSL 5 BASIC15.67■□□□□ 0.1
SNAI2O43623 ZFAND5-202ENST00000343431 1073 ntAPPRIS P1 TSL 5 BASIC15.67■□□□□ 0.1
SNAI2O43623 AC005540.1-201ENST00000413911 919 ntTSL 3 BASIC15.67■□□□□ 0.1
SNAI2O43623 AC092028.1-203ENST00000608262 953 ntBASIC15.67■□□□□ 0.1
SNAI2O43623 GADD45A-205ENST00000617962 1142 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
SNAI2O43623 MARK1-202ENST00000366918 5169 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
SNAI2O43623 RETREG2-203ENST00000430297 4618 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
SNAI2O43623 TDRP-203ENST00000523656 2622 ntTSL 5 BASIC15.67■□□□□ 0.1
SNAI2O43623 RITA1-201ENST00000548278 2053 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
SNAI2O43623 AC138696.1-201ENST00000522452 2897 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
SNAI2O43623 EI24-211ENST00000534546 1544 ntTSL 2 BASIC15.67■□□□□ 0.1
SNAI2O43623 B3GNT2-201ENST00000301998 2763 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
SNAI2O43623 PFKFB3-219ENST00000640683 2311 ntTSL 5 BASIC15.67■□□□□ 0.1
SNAI2O43623 SPOP-206ENST00000504102 1865 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
SNAI2O43623 MBD3-201ENST00000156825 5518 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
SNAI2O43623 THOC6-202ENST00000326266 1419 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
SNAI2O43623 RASGEF1C-201ENST00000361132 2243 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
SNAI2O43623 SEPT5-209ENST00000438754 2241 ntTSL 2 BASIC15.67■□□□□ 0.1
SNAI2O43623 BTBD11-201ENST00000280758 5767 ntAPPRIS P3 TSL 5 BASIC15.67■□□□□ 0.1
SNAI2O43623 FAM43B-201ENST00000332947 2572 ntAPPRIS P1 BASIC15.67■□□□□ 0.1
SNAI2O43623 FAM3A-208ENST00000419205 1763 ntTSL 2 BASIC15.67■□□□□ 0.1
SNAI2O43623 XBP1-207ENST00000611155 1794 ntTSL 5 BASIC15.67■□□□□ 0.1
SNAI2O43623 INPP1-201ENST00000322522 1919 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
SNAI2O43623 SHKBP1-225ENST00000600733 2284 ntTSL 5 BASIC15.66■□□□□ 0.1
SNAI2O43623 AC026471.6-201ENST00000622954 1905 ntBASIC15.66■□□□□ 0.1
SNAI2O43623 SOCS2-201ENST00000340600 2761 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
SNAI2O43623 ESR2-212ENST00000556275 2695 ntTSL 2 BASIC15.66■□□□□ 0.1
SNAI2O43623 QKI-205ENST00000392127 7911 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
SNAI2O43623 MAPK8IP3-202ENST00000356010 4456 ntTSL 5 BASIC15.66■□□□□ 0.1
SNAI2O43623 CAMK2N2-201ENST00000296238 1362 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
SNAI2O43623 DECR2-201ENST00000219481 1615 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
SNAI2O43623 USP45-205ENST00000472914 1617 ntTSL 5 BASIC15.66■□□□□ 0.1
SNAI2O43623 POLD2-218ENST00000610533 1619 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
SNAI2O43623 NDUFV2-201ENST00000318388 930 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
SNAI2O43623 EBPL-205ENST00000378284 967 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
SNAI2O43623 HMGA2-202ENST00000393577 611 ntTSL 3 BASIC15.66■□□□□ 0.1
SNAI2O43623 PRELID1-203ENST00000503216 1171 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
SNAI2O43623 LRRK1-208ENST00000532029 1241 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
SNAI2O43623 ACYP1-205ENST00000555463 789 ntTSL 2 BASIC15.66■□□□□ 0.1
SNAI2O43623 OIP5-AS1-208ENST00000560706 473 ntTSL 5 BASIC15.66■□□□□ 0.1
SNAI2O43623 LINC01925-201ENST00000579492 500 ntTSL 5 BASIC15.66■□□□□ 0.1
SNAI2O43623 AC018755.3-201ENST00000598755 664 ntTSL 2 BASIC15.66■□□□□ 0.1
SNAI2O43623 CASR-204ENST00000638421 5088 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
SNAI2O43623 SLC39A4-201ENST00000276833 2297 ntTSL 2 BASIC15.66■□□□□ 0.1
SNAI2O43623 OR7E47P-201ENST00000546390 1422 ntBASIC15.66■□□□□ 0.1
SNAI2O43623 WDR86-203ENST00000469830 1691 ntTSL 2 BASIC15.66■□□□□ 0.1
SNAI2O43623 SLMAP-201ENST00000295951 5433 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
SNAI2O43623 PCDH8-202ENST00000377942 5088 ntAPPRIS P4 TSL 1 (best) BASIC15.66■□□□□ 0.1
SNAI2O43623 MESP2-201ENST00000341735 1552 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
SNAI2O43623 TDRP-202ENST00000427263 2465 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
SNAI2O43623 GRK4-203ENST00000398052 2202 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
SNAI2O43623 SOHLH1-201ENST00000298466 1987 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
SNAI2O43623 FAM47E-201ENST00000424749 1484 ntAPPRIS P3 TSL 5 BASIC15.65■□□□□ 0.1
SNAI2O43623 HFE2-202ENST00000357836 2123 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
SNAI2O43623 OTOP1-201ENST00000296358 1864 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
SNAI2O43623 FIP1L1-201ENST00000306932 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
SNAI2O43623 BASP1-201ENST00000322611 1878 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
SNAI2O43623 DMPK-205ENST00000458663 2548 ntTSL 5 BASIC15.65■□□□□ 0.1
SNAI2O43623 B4GALNT1-203ENST00000449184 1633 ntTSL 2 BASIC15.65■□□□□ 0.1
SNAI2O43623 FRMD3-204ENST00000376438 2198 ntTSL 2 BASIC15.65■□□□□ 0.1
SNAI2O43623 KLHDC10-201ENST00000335420 6437 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
SNAI2O43623 NAB2-201ENST00000300131 2711 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
SNAI2O43623 TMEM235-202ENST00000421688 2490 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
SNAI2O43623 CPNE9-203ENST00000383832 2068 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
SNAI2O43623 CD72-202ENST00000378430 585 ntTSL 3 BASIC15.65■□□□□ 0.1
SNAI2O43623 PRR7-204ENST00000510492 1285 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
SNAI2O43623 PTRH1-208ENST00000543175 814 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
SNAI2O43623 MTDHP2-201ENST00000601468 714 ntBASIC15.65■□□□□ 0.1
SNAI2O43623 PHF2-202ENST00000375376 3045 ntTSL 5 BASIC15.65■□□□□ 0.1
SNAI2O43623 NAT16-201ENST00000300303 2935 ntAPPRIS P2 TSL 2 BASIC15.65■□□□□ 0.1
SNAI2O43623 GPSM1-201ENST00000291775 2114 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
SNAI2O43623 PCDHAC2-201ENST00000289269 5963 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
SNAI2O43623 NAT8L-201ENST00000331662 5571 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
SNAI2O43623 CCKBR-206ENST00000532715 1734 ntTSL 3 BASIC15.65■□□□□ 0.1
SNAI2O43623 DNAJC7-203ENST00000457167 2022 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
SNAI2O43623 TJP1-208ENST00000495972 2890 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
SNAI2O43623 TANGO2-212ENST00000434570 2180 ntTSL 2 BASIC15.65■□□□□ 0.1
SNAI2O43623 AC087289.5-201ENST00000586076 3175 ntBASIC15.65■□□□□ 0.1
SNAI2O43623 PHLDA1-202ENST00000602540 5741 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
SNAI2O43623 AC007040.2-201ENST00000606025 4170 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
SNAI2O43623 RASSF1-203ENST00000359365 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC15.64■□□□□ 0.09
SNAI2O43623 METTL1-202ENST00000324871 2066 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
SNAI2O43623 PTGER2-201ENST00000245457 2383 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
SNAI2O43623 AGPAT5-201ENST00000285518 3685 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
SNAI2O43623 ADCY5-202ENST00000462833 7311 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
SNAI2O43623 HMOX1-201ENST00000216117 1822 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
SNAI2O43623 RBKS-201ENST00000302188 1973 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
SNAI2O43623 NTRK1-206ENST00000524377 2432 ntAPPRIS P3 TSL 1 (best) BASIC15.64■□□□□ 0.09
SNAI2O43623 FAM118B-209ENST00000533050 2402 ntAPPRIS P3 TSL 1 (best) BASIC15.64■□□□□ 0.09
SNAI2O43623 NOMO2-201ENST00000330537 4352 ntAPPRIS ALT2 TSL 5 BASIC15.64■□□□□ 0.09
SNAI2O43623 MAPK8IP1-201ENST00000241014 3050 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
SNAI2O43623 TFPT-201ENST00000391757 774 ntTSL 5 BASIC15.64■□□□□ 0.09
SNAI2O43623 TFPT-202ENST00000391758 804 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
SNAI2O43623 ZDHHC20-203ENST00000400590 1869 ntAPPRIS ALT2 TSL 5 BASIC15.64■□□□□ 0.09
SNAI2O43623 SMUG1-203ENST00000401977 1082 ntAPPRIS P1 TSL 5 BASIC15.64■□□□□ 0.09
SNAI2O43623 LINC01770-201ENST00000417917 634 ntTSL 2 BASIC15.64■□□□□ 0.09
SNAI2O43623 FAM72B-203ENST00000452190 748 ntTSL 3 BASIC15.64■□□□□ 0.09
SNAI2O43623 GDF6-202ENST00000620978 973 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Retrieved 100 of 98,524 protein–RNA pairs in 18.3 ms