Protein–RNA interactions for Protein: O43325

LYRM1, LYR motif-containing protein 1, humanhuman

Predictions only

Length 122 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LYRM1O43325 IL17RC-203ENST00000403601 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
LYRM1O43325 ITPKB-203ENST00000429204 6162 ntAPPRIS P1 TSL 5 BASIC18.14■□□□□ 0.49
LYRM1O43325 AC104581.1-201ENST00000324348 2852 ntAPPRIS P1 TSL 2 BASIC18.14■□□□□ 0.49
LYRM1O43325 ZGPAT-206ENST00000448100 1881 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
LYRM1O43325 RIPPLY3-201ENST00000329553 2235 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
LYRM1O43325 FAM129C-201ENST00000332386 2222 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
LYRM1O43325 S1PR5-201ENST00000333430 2341 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
LYRM1O43325 AC098818.2-201ENST00000564925 2320 ntBASIC18.14■□□□□ 0.49
LYRM1O43325 UBE2E3-213ENST00000602959 909 ntAPPRIS P1 TSL 5 BASIC18.14■□□□□ 0.49
LYRM1O43325 PACSIN3-211ENST00000539589 2009 ntAPPRIS P1 TSL 2 BASIC18.14■□□□□ 0.49
LYRM1O43325 VSTM2A-203ENST00000404951 2521 ntTSL 5 BASIC18.14■□□□□ 0.49
LYRM1O43325 PHF11-202ENST00000378319 1359 ntAPPRIS P3 TSL 1 (best) BASIC18.14■□□□□ 0.49
LYRM1O43325 NXN-201ENST00000336868 3036 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
LYRM1O43325 PIK3R1-201ENST00000320694 2625 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
LYRM1O43325 NOTCH2NL-204ENST00000579793 1954 ntAPPRIS ALT2 TSL 2 BASIC18.13■□□□□ 0.49
LYRM1O43325 LRFN4-201ENST00000309602 2431 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
LYRM1O43325 AF131216.4-201ENST00000638924 1588 ntBASIC18.13■□□□□ 0.49
LYRM1O43325 CBWD3-213ENST00000618217 1611 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
LYRM1O43325 BCL7A-201ENST00000261822 2581 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
LYRM1O43325 MYH14-206ENST00000596571 5988 ntAPPRIS ALT2 TSL 5 BASIC18.13■□□□□ 0.49
LYRM1O43325 CMTM3-201ENST00000361909 2159 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
LYRM1O43325 CDAN1-201ENST00000356231 4637 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
LYRM1O43325 ZNF692-202ENST00000366471 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
LYRM1O43325 SLC35C1-202ENST00000442528 1756 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
LYRM1O43325 AC092807.3-205ENST00000467666 531 ntTSL 3 BASIC18.13■□□□□ 0.49
LYRM1O43325 C11orf96-203ENST00000617612 1294 ntAPPRIS P1 BASIC18.13■□□□□ 0.49
LYRM1O43325 AC013394.1-201ENST00000629685 808 ntAPPRIS P1 TSL 5 BASIC18.13■□□□□ 0.49
LYRM1O43325 UGP2-201ENST00000337130 2338 ntAPPRIS P2 TSL 1 (best) BASIC18.13■□□□□ 0.49
LYRM1O43325 ZNF12-201ENST00000342651 2921 ntAPPRIS ALT2 TSL 2 BASIC18.13■□□□□ 0.49
LYRM1O43325 CDK13-202ENST00000340829 5066 ntAPPRIS ALT1 TSL 1 (best) BASIC18.13■□□□□ 0.49
LYRM1O43325 KCNS2-201ENST00000287042 5219 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
LYRM1O43325 C5orf47-201ENST00000340147 2522 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
LYRM1O43325 CEP55-201ENST00000371485 2638 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
LYRM1O43325 KRT18-201ENST00000388835 1562 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
LYRM1O43325 SPOPL-201ENST00000280098 6025 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
LYRM1O43325 PHF2-202ENST00000375376 3045 ntTSL 5 BASIC18.12■□□□□ 0.49
LYRM1O43325 C7orf49-213ENST00000617987 1727 ntTSL 5 BASIC18.12■□□□□ 0.49
LYRM1O43325 GAS6-201ENST00000327773 2490 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
LYRM1O43325 MAF1-205ENST00000534585 1754 ntTSL 5 BASIC18.12■□□□□ 0.49
LYRM1O43325 FOXC1-201ENST00000380874 3926 ntAPPRIS P1 BASIC18.12■□□□□ 0.49
LYRM1O43325 ACTR5-201ENST00000243903 2565 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
LYRM1O43325 UBE2N-201ENST00000318066 5186 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
LYRM1O43325 HDAC11-211ENST00000433119 2043 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
LYRM1O43325 TINCR-201ENST00000448587 3733 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
LYRM1O43325 RETREG2-203ENST00000430297 4618 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
LYRM1O43325 SPCS2P3-201ENST00000500401 656 ntBASIC18.12■□□□□ 0.49
LYRM1O43325 DUX4L4-201ENST00000566884 1269 ntBASIC18.12■□□□□ 0.49
LYRM1O43325 AGTR1-209ENST00000497524 2359 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
LYRM1O43325 AC112907.3-201ENST00000577781 2400 ntBASIC18.12■□□□□ 0.49
LYRM1O43325 HSPD1-202ENST00000388968 2455 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
LYRM1O43325 STAP2-206ENST00000600324 1508 ntAPPRIS P3 TSL 2 BASIC18.12■□□□□ 0.49
LYRM1O43325 TMEM151A-201ENST00000327259 2562 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
LYRM1O43325 STARD10-213ENST00000538536 1678 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
LYRM1O43325 HTATIP2-204ENST00000451739 1748 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
LYRM1O43325 AC027702.1-201ENST00000563810 1770 ntBASIC18.12■□□□□ 0.49
LYRM1O43325 NAGK-229ENST00000613852 1801 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
LYRM1O43325 FBXO24-202ENST00000427939 2087 ntTSL 2 BASIC18.11■□□□□ 0.49
LYRM1O43325 MAFF-202ENST00000407965 2325 ntAPPRIS P1 TSL 2 BASIC18.11■□□□□ 0.49
LYRM1O43325 CLINT1-207ENST00000523908 2346 ntAPPRIS ALT1 TSL 1 (best) BASIC18.11■□□□□ 0.49
LYRM1O43325 ACSS3-201ENST00000261206 2666 ntAPPRIS ALT1 TSL 1 (best) BASIC18.11■□□□□ 0.49
LYRM1O43325 PRPF39-201ENST00000355765 2868 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
LYRM1O43325 GRB10-201ENST00000335866 5032 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
LYRM1O43325 R3HDM4-208ENST00000626716 138 ntTSL 5 BASIC18.11■□□□□ 0.49
LYRM1O43325 PSMG3-202ENST00000288607 1391 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
LYRM1O43325 ABHD16B-201ENST00000369916 1491 ntAPPRIS P1 BASIC18.11■□□□□ 0.49
LYRM1O43325 PKIB-204ENST00000368448 1561 ntAPPRIS P1 TSL 5 BASIC18.11■□□□□ 0.49
LYRM1O43325 LAYN-204ENST00000525126 1763 ntTSL 5 BASIC18.11■□□□□ 0.49
LYRM1O43325 CDC14A-203ENST00000370124 1883 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
LYRM1O43325 NOP14-202ENST00000398071 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
LYRM1O43325 CHRNB1-201ENST00000306071 2557 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
LYRM1O43325 ILDR2-207ENST00000529071 2566 ntAPPRIS ALT2 TSL 5 BASIC18.11■□□□□ 0.49
LYRM1O43325 MTSS1L-201ENST00000338779 4992 ntAPPRIS P2 TSL 1 (best) BASIC18.11■□□□□ 0.49
LYRM1O43325 WNK2-204ENST00000427277 6108 ntTSL 5 BASIC18.11■□□□□ 0.49
LYRM1O43325 RIMBP3B-201ENST00000620804 6105 ntAPPRIS P1 BASIC18.1■□□□□ 0.49
LYRM1O43325 BACE2-202ENST00000330333 2993 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
LYRM1O43325 HOXC6-202ENST00000394331 2943 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
LYRM1O43325 TMTC1-203ENST00000539277 2758 ntAPPRIS P2 TSL 1 (best) BASIC18.1■□□□□ 0.49
LYRM1O43325 RNF212-202ENST00000382968 2335 ntAPPRIS P3 TSL 1 (best) BASIC18.1■□□□□ 0.49
LYRM1O43325 SSH3-202ENST00000308298 2046 ntTSL 2 BASIC18.1■□□□□ 0.49
LYRM1O43325 ARHGDIA-201ENST00000269321 1906 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
LYRM1O43325 SQLE-206ENST00000523430 1879 ntTSL 2 BASIC18.1■□□□□ 0.49
LYRM1O43325 AC009531.1-201ENST00000442323 580 ntTSL 4 BASIC18.1■□□□□ 0.49
LYRM1O43325 CEP120-209ENST00000515110 606 ntTSL 3 BASIC18.1■□□□□ 0.49
LYRM1O43325 AC016595.1-201ENST00000559410 383 ntTSL 3 BASIC18.1■□□□□ 0.49
LYRM1O43325 LINC01233-202ENST00000598832 568 ntTSL 2 BASIC18.1■□□□□ 0.49
LYRM1O43325 AGFG2-201ENST00000300176 4796 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
LYRM1O43325 P4HB-201ENST00000331483 2603 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
LYRM1O43325 TCAIM-203ENST00000396078 2178 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
LYRM1O43325 POLD2-202ENST00000406581 2158 ntAPPRIS P1 TSL 2 BASIC18.1■□□□□ 0.49
LYRM1O43325 ZNF280B-203ENST00000626650 5721 ntAPPRIS P1 TSL 2 BASIC18.1■□□□□ 0.49
LYRM1O43325 FUS-210ENST00000568685 1785 ntAPPRIS ALT2 TSL 5 BASIC18.09■□□□□ 0.49
LYRM1O43325 GIT1-201ENST00000225394 3768 ntAPPRIS P3 TSL 1 (best) BASIC18.09■□□□□ 0.49
LYRM1O43325 MFSD7-202ENST00000347950 1599 ntTSL 2 BASIC18.09■□□□□ 0.49
LYRM1O43325 MFSD3-201ENST00000301327 1548 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
LYRM1O43325 FMN2-201ENST00000319653 6434 ntAPPRIS P1 TSL 5 BASIC18.09■□□□□ 0.49
LYRM1O43325 ARMC6-202ENST00000392335 2383 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
LYRM1O43325 NFKBIE-204ENST00000619360 2327 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
LYRM1O43325 REST-206ENST00000612429 1376 ntTSL 5 BASIC18.09■□□□□ 0.49
LYRM1O43325 REST-207ENST00000616975 1370 ntTSL 5 BASIC18.09■□□□□ 0.49
LYRM1O43325 REST-212ENST00000640343 1352 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 24.6 ms