Protein–RNA interactions for Protein: O43175

PHGDH, D-3-phosphoglycerate dehydrogenase, humanhuman

Known RBP Predictions only

Length 533 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDHO43175 KCNK12-201ENST00000327876 6227 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
PHGDHO43175 CD55-205ENST00000367067 1843 ntAPPRIS ALT2 TSL 5 BASIC20.95■□□□□ 0.94
PHGDHO43175 MAPRE3-203ENST00000405074 1801 ntTSL 3 BASIC20.95■□□□□ 0.94
PHGDHO43175 TEAD2-208ENST00000598810 2191 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
PHGDHO43175 SSBP3-216ENST00000610401 3168 ntTSL 5 BASIC20.95■□□□□ 0.94
PHGDHO43175 CCDC107-203ENST00000378407 899 ntAPPRIS ALT2 TSL 2 BASIC20.95■□□□□ 0.94
PHGDHO43175 AL355987.3-201ENST00000456614 735 ntAPPRIS P1 TSL 4 BASIC20.95■□□□□ 0.94
PHGDHO43175 TUSC3-209ENST00000509380 1266 ntTSL 5 BASIC20.95■□□□□ 0.94
PHGDHO43175 CHTF8-208ENST00000522091 863 ntTSL 2 BASIC20.95■□□□□ 0.94
PHGDHO43175 TRAPPC6A-205ENST00000592647 514 ntTSL 2 BASIC20.95■□□□□ 0.94
PHGDHO43175 BAG1-212ENST00000641048 1038 ntAPPRIS P3 BASIC20.95■□□□□ 0.94
PHGDHO43175 SERBP1-202ENST00000370990 1621 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.94
PHGDHO43175 CEBPA-201ENST00000498907 2631 ntAPPRIS P1 BASIC20.95■□□□□ 0.94
PHGDHO43175 HSD11B1L-218ENST00000581773 1687 ntAPPRIS P3 TSL 1 (best) BASIC20.95■□□□□ 0.94
PHGDHO43175 AC008406.3-201ENST00000620001 1374 ntBASIC20.95■□□□□ 0.94
PHGDHO43175 CELF2-213ENST00000633077 1733 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
PHGDHO43175 AC010616.1-201ENST00000597630 2078 ntAPPRIS P1 TSL 5 BASIC20.95■□□□□ 0.94
PHGDHO43175 TTC39C-202ENST00000317571 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.94
PHGDHO43175 HFE2-202ENST00000357836 2123 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
PHGDHO43175 C12orf76-203ENST00000546651 1755 ntTSL 2 BASIC20.95■□□□□ 0.94
PHGDHO43175 BRSK2-208ENST00000528841 3586 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.94
PHGDHO43175 RABL2B-206ENST00000395598 2169 ntAPPRIS P3 TSL 1 (best) BASIC20.95■□□□□ 0.94
PHGDHO43175 DACH1-201ENST00000611519 4789 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
PHGDHO43175 PROSER2-205ENST00000622831 1646 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
PHGDHO43175 SCN1B-206ENST00000638536 1600 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
PHGDHO43175 FNDC10-201ENST00000422725 2085 ntAPPRIS P1 BASIC20.94■□□□□ 0.94
PHGDHO43175 ZNF688-201ENST00000223459 2506 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
PHGDHO43175 C16orf86-201ENST00000403458 1267 ntAPPRIS P2 TSL 1 (best) BASIC20.94■□□□□ 0.94
PHGDHO43175 AC099791.1-201ENST00000416440 715 ntBASIC20.94■□□□□ 0.94
PHGDHO43175 CAMTA1-208ENST00000473578 567 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
PHGDHO43175 MCRIP1-204ENST00000570507 765 ntTSL 2 BASIC20.94■□□□□ 0.94
PHGDHO43175 ACAP1-206ENST00000571471 320 ntTSL 2 BASIC20.94■□□□□ 0.94
PHGDHO43175 MCRIP1-208ENST00000575061 618 ntTSL 5 BASIC20.94■□□□□ 0.94
PHGDHO43175 PPP1R14A-204ENST00000591291 433 ntTSL 5 BASIC20.94■□□□□ 0.94
PHGDHO43175 TEX22-201ENST00000451127 2571 ntAPPRIS P1 TSL 2 BASIC20.94■□□□□ 0.94
PHGDHO43175 S1PR5-202ENST00000439028 2191 ntAPPRIS P1 TSL 2 BASIC20.94■□□□□ 0.94
PHGDHO43175 UQCR11-203ENST00000591899 1324 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
PHGDHO43175 TMEM17-201ENST00000335390 1797 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
PHGDHO43175 ZNF584-201ENST00000306910 2332 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
PHGDHO43175 MED17-221ENST00000639724 2317 ntTSL 5 BASIC20.94■□□□□ 0.94
PHGDHO43175 MGAT4B-201ENST00000292591 2446 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
PHGDHO43175 PARN-205ENST00000539279 1557 ntTSL 2 BASIC20.93■□□□□ 0.94
PHGDHO43175 TMEM129-201ENST00000303277 2678 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
PHGDHO43175 EED-201ENST00000263360 2223 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
PHGDHO43175 CBWD3-202ENST00000377342 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
PHGDHO43175 SMTNL2-202ENST00000389313 2280 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
PHGDHO43175 ZC3HAV1L-201ENST00000275766 1753 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
PHGDHO43175 FAM3A-208ENST00000419205 1763 ntTSL 2 BASIC20.93■□□□□ 0.94
PHGDHO43175 ANKRD63-201ENST00000434396 1143 ntAPPRIS P1 BASIC20.93■□□□□ 0.94
PHGDHO43175 PBX2P1-201ENST00000493219 1291 ntBASIC20.93■□□□□ 0.94
PHGDHO43175 SCO2-204ENST00000543927 1051 ntAPPRIS P1 TSL 2 BASIC20.93■□□□□ 0.94
PHGDHO43175 DNAAF4-201ENST00000321149 1993 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
PHGDHO43175 RNF38-205ENST00000377877 1974 ntTSL 2 BASIC20.93■□□□□ 0.94
PHGDHO43175 RAB24-201ENST00000303251 1311 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
PHGDHO43175 CLPB-202ENST00000340729 2071 ntTSL 2 BASIC20.93■□□□□ 0.94
PHGDHO43175 ATP9A-202ENST00000338821 8106 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
PHGDHO43175 PAXIP1-AS1-201ENST00000608317 2256 ntBASIC20.93■□□□□ 0.94
PHGDHO43175 POFUT1-201ENST00000375730 1507 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
PHGDHO43175 GNB1-209ENST00000610897 3145 ntAPPRIS P1 TSL 5 BASIC20.93■□□□□ 0.94
PHGDHO43175 SLC2A11-202ENST00000316185 1555 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
PHGDHO43175 AOC1-202ENST00000416793 2453 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
PHGDHO43175 GNB1L-202ENST00000403325 1699 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
PHGDHO43175 CXCL16-203ENST00000574412 1668 ntAPPRIS P2 TSL 1 (best) BASIC20.93■□□□□ 0.94
PHGDHO43175 POMGNT2-201ENST00000344697 2544 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
PHGDHO43175 MAPK9-203ENST00000393360 4326 ntTSL 5 BASIC20.92■□□□□ 0.94
PHGDHO43175 HES4-201ENST00000304952 899 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
PHGDHO43175 HM13-AS1-201ENST00000412178 489 ntTSL 3 BASIC20.92■□□□□ 0.94
PHGDHO43175 PEMT-206ENST00000435340 960 ntTSL 5 BASIC20.92■□□□□ 0.94
PHGDHO43175 CALM1-202ENST00000447653 1104 ntAPPRIS ALT1 TSL 2 BASIC20.92■□□□□ 0.94
PHGDHO43175 NDUFS3-206ENST00000528192 561 ntTSL 5 BASIC20.92■□□□□ 0.94
PHGDHO43175 OTUB1-212ENST00000543988 1259 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
PHGDHO43175 MTCL1-201ENST00000306329 5718 ntAPPRIS ALT2 TSL 5 BASIC20.92■□□□□ 0.94
PHGDHO43175 COL13A1-202ENST00000357811 2991 ntAPPRIS ALT2 TSL 5 BASIC20.92■□□□□ 0.94
PHGDHO43175 AC110285.2-201ENST00000571724 1565 ntTSL 2 BASIC20.92■□□□□ 0.94
PHGDHO43175 NDUFB2-212ENST00000476279 1666 ntAPPRIS P1 TSL 5 BASIC20.92■□□□□ 0.94
PHGDHO43175 METTL1-202ENST00000324871 2066 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
PHGDHO43175 PRSS22-201ENST00000161006 1386 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
PHGDHO43175 DTX4-201ENST00000227451 5642 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
PHGDHO43175 TCP11-202ENST00000311875 2166 ntAPPRIS ALT2 TSL 1 (best) BASIC20.91■□□□□ 0.94
PHGDHO43175 ING1-201ENST00000333219 5119 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
PHGDHO43175 GJC2-201ENST00000366714 2243 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
PHGDHO43175 OLFM1-204ENST00000371793 2444 ntAPPRIS P1 TSL 3 BASIC20.91■□□□□ 0.94
PHGDHO43175 MANEAL-202ENST00000373045 2685 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
PHGDHO43175 CDKN2B-202ENST00000380142 859 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
PHGDHO43175 JADE2-204ENST00000402835 2797 ntTSL 5 BASIC20.91■□□□□ 0.94
PHGDHO43175 OLA1-204ENST00000409546 2071 ntTSL 5 BASIC20.91■□□□□ 0.94
PHGDHO43175 GRAMD4P2-201ENST00000423297 1097 ntBASIC20.91■□□□□ 0.94
PHGDHO43175 ZEB1-AS1-201ENST00000423714 456 ntTSL 3 BASIC20.91■□□□□ 0.94
PHGDHO43175 TRMT2A-204ENST00000439169 2473 ntTSL 5 BASIC20.91■□□□□ 0.94
PHGDHO43175 TSPY26P-201ENST00000476365 1326 ntBASIC20.91■□□□□ 0.94
PHGDHO43175 UBA5-211ENST00000493720 2058 ntTSL 5 BASIC20.91■□□□□ 0.94
PHGDHO43175 ZNF696-205ENST00000521537 705 ntTSL 2 BASIC20.91■□□□□ 0.94
PHGDHO43175 AL359317.1-201ENST00000556316 578 ntTSL 4 BASIC20.91■□□□□ 0.94
PHGDHO43175 Z97653.1-201ENST00000567096 446 ntTSL 3 BASIC20.91■□□□□ 0.94
PHGDHO43175 GRAMD4P4-201ENST00000613563 1115 ntBASIC20.91■□□□□ 0.94
PHGDHO43175 SLC25A24-204ENST00000569674 2357 ntBASIC20.9■□□□□ 0.94
PHGDHO43175 CENPU-201ENST00000281453 1998 ntAPPRIS P2 TSL 1 (best) BASIC20.9■□□□□ 0.94
PHGDHO43175 DDIT4-201ENST00000307365 1748 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
PHGDHO43175 ATAD3A-202ENST00000378755 2612 ntTSL 2 BASIC20.9■□□□□ 0.94
PHGDHO43175 AICDA-202ENST00000537228 667 ntTSL 5 BASIC20.9■□□□□ 0.94
Retrieved 100 of 98,524 protein–RNA pairs in 22 ms