Protein–RNA interactions for Protein: O14579

COPE, Coatomer subunit epsilon, humanhuman

Predictions only

Length 308 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COPEO14579 CCDC189-211ENST00000545825 1046 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
COPEO14579 ZNRF1-205ENST00000566250 1069 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
COPEO14579 ZNRF1-206ENST00000567962 1234 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
COPEO14579 PRSS21-201ENST00000005995 1101 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
COPEO14579 SNUPN-205ENST00000564644 1931 ntAPPRIS P1 TSL 2 BASIC21.05■□□□□ 0.96
COPEO14579 CEBPE-201ENST00000206513 1554 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
COPEO14579 TMEM178A-201ENST00000281961 1662 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
COPEO14579 NEUROG1-201ENST00000314744 1668 ntAPPRIS P1 BASIC21.05■□□□□ 0.96
COPEO14579 SNX27-204ENST00000458013 6403 ntAPPRIS ALT1 TSL 5 BASIC21.05■□□□□ 0.96
COPEO14579 BCAM-201ENST00000270233 2402 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
COPEO14579 PCSK6-214ENST00000611716 4409 ntAPPRIS P4 TSL 1 (best) BASIC21.05■□□□□ 0.96
COPEO14579 PXYLP1-203ENST00000502783 2066 ntTSL 2 BASIC21.05■□□□□ 0.96
COPEO14579 RPUSD1-202ENST00000561734 2159 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
COPEO14579 GRINA-202ENST00000395068 1814 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
COPEO14579 NR1H2-204ENST00000593926 1828 ntAPPRIS P2 TSL 5 BASIC21.04■□□□□ 0.96
COPEO14579 C17orf67-201ENST00000397861 2013 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
COPEO14579 MGAT5B-201ENST00000301618 4486 ntAPPRIS P3 TSL 5 BASIC21.04■□□□□ 0.96
COPEO14579 FDX2-202ENST00000393708 1012 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
COPEO14579 CXCR3-201ENST00000373691 1861 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
COPEO14579 NUDT11-201ENST00000375992 2385 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
COPEO14579 PPP1R3F-201ENST00000055335 3421 ntAPPRIS P1 TSL 2 BASIC21.04■□□□□ 0.96
COPEO14579 GRK4-203ENST00000398052 2202 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
COPEO14579 SPNS1-203ENST00000334536 2027 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
COPEO14579 IRF7-204ENST00000397570 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC21.04■□□□□ 0.96
COPEO14579 SYF2-201ENST00000236273 1345 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
COPEO14579 TUBGCP3-204ENST00000464139 2461 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
COPEO14579 FADS6-203ENST00000612771 2154 ntAPPRIS P2 TSL 1 (best) BASIC21.03■□□□□ 0.96
COPEO14579 CAMK2B-207ENST00000358707 1895 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
COPEO14579 SMUG1-215ENST00000508394 1697 ntAPPRIS P1 TSL 2 BASIC21.03■□□□□ 0.96
COPEO14579 LEF1-AS1-207ENST00000512637 1675 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
COPEO14579 FAM102B-202ENST00000405454 1585 ntAPPRIS ALT2 TSL 5 BASIC21.03■□□□□ 0.96
COPEO14579 COMMD5-207ENST00000543949 1571 ntAPPRIS P1 TSL 3 BASIC21.03■□□□□ 0.96
COPEO14579 DLEU2-208ENST00000621282 3068 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
COPEO14579 UBE2E2-203ENST00000425792 1248 ntAPPRIS P1 TSL 2 BASIC21.03■□□□□ 0.96
COPEO14579 AL356740.2-201ENST00000601559 647 ntBASIC21.03■□□□□ 0.96
COPEO14579 ZNF800-208ENST00000619291 2099 ntTSL 5 BASIC21.03■□□□□ 0.96
COPEO14579 PALM-207ENST00000590161 2137 ntTSL 4 BASIC21.02■□□□□ 0.96
COPEO14579 MAML1-201ENST00000292599 5723 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
COPEO14579 SNX8-201ENST00000222990 4727 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
COPEO14579 TPM1-208ENST00000404484 1568 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
COPEO14579 CYP27A1-201ENST00000258415 2286 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
COPEO14579 SERP2-201ENST00000379179 784 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
COPEO14579 MIR17HG-201ENST00000400282 931 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
COPEO14579 AC092171.4-201ENST00000609130 632 ntBASIC21.02■□□□□ 0.96
COPEO14579 ME2-216ENST00000639850 2331 ntTSL 5 BASIC21.02■□□□□ 0.96
COPEO14579 C19orf35-201ENST00000342063 2574 ntAPPRIS P1 TSL 2 BASIC21.02■□□□□ 0.96
COPEO14579 AC025164.2-201ENST00000501008 1898 ntTSL 5 BASIC21.02■□□□□ 0.96
COPEO14579 SQLE-206ENST00000523430 1879 ntTSL 2 BASIC21.02■□□□□ 0.96
COPEO14579 HMGA2-205ENST00000425208 1444 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
COPEO14579 SHKBP1-225ENST00000600733 2284 ntTSL 5 BASIC21.02■□□□□ 0.95
COPEO14579 EPHA10-202ENST00000373048 5425 ntAPPRIS P2 TSL 5 BASIC21.02■□□□□ 0.95
COPEO14579 MAP1LC3A-201ENST00000360668 1574 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.95
COPEO14579 JAKMIP1-203ENST00000409371 2420 ntTSL 1 (best) BASIC21.02■□□□□ 0.95
COPEO14579 GRINA-201ENST00000313269 1968 ntAPPRIS P1 TSL 5 BASIC21.01■□□□□ 0.95
COPEO14579 ZFP64-206ENST00000371523 2234 ntTSL 2 BASIC21.01■□□□□ 0.95
COPEO14579 BCR-202ENST00000359540 4708 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
COPEO14579 FAM129C-203ENST00000449408 2004 ntAPPRIS ALT2 TSL 2 BASIC21.01■□□□□ 0.95
COPEO14579 MAF1-205ENST00000534585 1754 ntTSL 5 BASIC21.01■□□□□ 0.95
COPEO14579 UBE2C-202ENST00000335046 737 ntTSL 2 BASIC21.01■□□□□ 0.95
COPEO14579 PABPN1-207ENST00000556821 1220 ntTSL 2 BASIC21.01■□□□□ 0.95
COPEO14579 TMEM80-207ENST00000608174 800 ntTSL 5 BASIC21.01■□□□□ 0.95
COPEO14579 LY6H-205ENST00000615409 980 ntAPPRIS P3 TSL 1 (best) BASIC21.01■□□□□ 0.95
COPEO14579 AC026362.1-201ENST00000540866 5618 ntTSL 2 BASIC21.01■□□□□ 0.95
COPEO14579 ARFRP1-210ENST00000614942 2554 ntTSL 5 BASIC21.01■□□□□ 0.95
COPEO14579 MARCH9-201ENST00000266643 2982 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
COPEO14579 IRX4-208ENST00000622814 2398 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
COPEO14579 C7orf26-201ENST00000344417 2182 ntAPPRIS P1 TSL 2 BASIC21■□□□□ 0.95
COPEO14579 SLC35A3-205ENST00000465289 5696 ntAPPRIS P1 TSL 5 BASIC21■□□□□ 0.95
COPEO14579 FOXP1-201ENST00000318779 843 ntTSL 1 (best) BASIC21■□□□□ 0.95
COPEO14579 POLR3GL-201ENST00000369313 818 ntTSL 2 BASIC21■□□□□ 0.95
COPEO14579 SRD5A1P1-201ENST00000442297 786 ntBASIC21■□□□□ 0.95
COPEO14579 ARPC4-208ENST00000498623 942 ntTSL 2 BASIC21■□□□□ 0.95
COPEO14579 AL121603.2-201ENST00000557373 2117 ntBASIC21■□□□□ 0.95
COPEO14579 HCG18-235ENST00000426882 4862 ntTSL 1 (best) BASIC21■□□□□ 0.95
COPEO14579 MLST8-202ENST00000382450 1861 ntAPPRIS ALT1 TSL 2 BASIC21■□□□□ 0.95
COPEO14579 MLST8-215ENST00000564088 1861 ntAPPRIS P3 TSL 2 BASIC21■□□□□ 0.95
COPEO14579 SMIM11B-205ENST00000624304 1863 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
COPEO14579 SACM1L-202ENST00000418611 2164 ntTSL 2 BASIC21■□□□□ 0.95
COPEO14579 GMPPA-205ENST00000373917 1630 ntTSL 5 BASIC21■□□□□ 0.95
COPEO14579 WDSUB1-202ENST00000359774 1912 ntAPPRIS P1 TSL 5 BASIC21■□□□□ 0.95
COPEO14579 TMEM204-202ENST00000566264 1938 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
COPEO14579 B3GAT3-202ENST00000531383 2056 ntTSL 2 BASIC21■□□□□ 0.95
COPEO14579 TMPO-204ENST00000393053 2374 ntTSL 1 (best) BASIC21■□□□□ 0.95
COPEO14579 SUSD1-202ENST00000374263 2973 ntAPPRIS ALT2 TSL 2 BASIC21■□□□□ 0.95
COPEO14579 OSR2-203ENST00000457907 2126 ntTSL 2 BASIC20.99■□□□□ 0.95
COPEO14579 SCOC-207ENST00000506597 1838 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
COPEO14579 AC006128.1-201ENST00000624704 1661 ntBASIC20.99■□□□□ 0.95
COPEO14579 VKORC1L1-202ENST00000434382 1541 ntTSL 2 BASIC20.99■□□□□ 0.95
COPEO14579 NR6A1-202ENST00000373584 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC20.99■□□□□ 0.95
COPEO14579 PITPNB-205ENST00000455418 2963 ntAPPRIS ALT1 TSL 5 BASIC20.99■□□□□ 0.95
COPEO14579 FAM151B-201ENST00000282226 1717 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
COPEO14579 GGA2-211ENST00000567468 1713 ntTSL 2 BASIC20.99■□□□□ 0.95
COPEO14579 ZIM2-206ENST00000599935 2226 ntAPPRIS P1 TSL 5 BASIC20.99■□□□□ 0.95
COPEO14579 CENPX-202ENST00000392359 805 ntAPPRIS P1 TSL 2 BASIC20.99■□□□□ 0.95
COPEO14579 DPP10-AS1-201ENST00000432658 730 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
COPEO14579 ARHGDIA-217ENST00000584461 886 ntTSL 2 BASIC20.99■□□□□ 0.95
COPEO14579 TUBBP5-204ENST00000635438 565 ntTSL 4 BASIC20.99■□□□□ 0.95
COPEO14579 SUMF2-208ENST00000434526 2052 ntAPPRIS P3 TSL 1 (best) BASIC20.99■□□□□ 0.95
COPEO14579 WISP2-203ENST00000372868 1600 ntAPPRIS P1 TSL 3 BASIC20.99■□□□□ 0.95
COPEO14579 IL17RC-205ENST00000413608 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC20.99■□□□□ 0.95
Retrieved 100 of 98,524 protein–RNA pairs in 41.8 ms