Protein–RNA interactions for Protein: O00241

SIRPB1, Signal-regulatory protein beta-1, humanhuman

Predictions only

Length 398 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIRPB1O00241 CTCF-202ENST00000401394 2978 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
SIRPB1O00241 PHF7-201ENST00000327906 2130 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
SIRPB1O00241 DYM-203ENST00000442713 2147 ntTSL 2 BASIC17.8■□□□□ 0.44
SIRPB1O00241 COMMD5-207ENST00000543949 1571 ntAPPRIS P1 TSL 3 BASIC17.8■□□□□ 0.44
SIRPB1O00241 FARSA-201ENST00000314606 1814 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
SIRPB1O00241 MGAT4D-208ENST00000515354 1806 ntTSL 3 BASIC17.8■□□□□ 0.44
SIRPB1O00241 MCAT-201ENST00000290429 2056 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
SIRPB1O00241 CDC37L1-202ENST00000381858 1244 ntTSL 5 BASIC17.8■□□□□ 0.44
SIRPB1O00241 MIR572-201ENST00000384983 95 ntBASIC17.8■□□□□ 0.44
SIRPB1O00241 Z97653.1-201ENST00000567096 446 ntTSL 3 BASIC17.8■□□□□ 0.44
SIRPB1O00241 TMEM121B-201ENST00000331437 4954 ntAPPRIS P3 BASIC17.8■□□□□ 0.44
SIRPB1O00241 ZNF668-209ENST00000539836 2469 ntTSL 5 BASIC17.8■□□□□ 0.44
SIRPB1O00241 SLC1A6-203ENST00000544886 2420 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
SIRPB1O00241 TERF1-202ENST00000276603 1677 ntAPPRIS P4 TSL 1 (best) BASIC17.8■□□□□ 0.44
SIRPB1O00241 MPZL1-201ENST00000359523 5010 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
SIRPB1O00241 NDUFB2-212ENST00000476279 1666 ntAPPRIS P1 TSL 5 BASIC17.8■□□□□ 0.44
SIRPB1O00241 AC009237.3-201ENST00000393279 1427 ntBASIC17.8■□□□□ 0.44
SIRPB1O00241 TMC6-212ENST00000589553 2389 ntTSL 2 BASIC17.8■□□□□ 0.44
SIRPB1O00241 SCRT1-201ENST00000569446 3779 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
SIRPB1O00241 SLC35A3-210ENST00000638371 2298 ntTSL 5 BASIC17.79■□□□□ 0.44
SIRPB1O00241 SETD6-202ENST00000310682 2042 ntAPPRIS P3 TSL 2 BASIC17.79■□□□□ 0.44
SIRPB1O00241 TTYH1-203ENST00000376531 1763 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
SIRPB1O00241 KIAA0895-204ENST00000415803 2865 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
SIRPB1O00241 LMO4-202ENST00000370544 5405 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
SIRPB1O00241 NR2F2-204ENST00000453270 1712 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
SIRPB1O00241 CCKBR-206ENST00000532715 1734 ntTSL 3 BASIC17.79■□□□□ 0.44
SIRPB1O00241 AP000662.2-202ENST00000530595 2790 ntTSL 2 BASIC17.79■□□□□ 0.44
SIRPB1O00241 MFF-208ENST00000409616 1247 ntTSL 5 BASIC17.79■□□□□ 0.44
SIRPB1O00241 ITGA9-AS1-210ENST00000457661 738 ntTSL 4 BASIC17.79■□□□□ 0.44
SIRPB1O00241 SUDS3P1-201ENST00000505831 966 ntBASIC17.79■□□□□ 0.44
SIRPB1O00241 OAF-201ENST00000328965 2525 ntAPPRIS P2 TSL 1 (best) BASIC17.79■□□□□ 0.44
SIRPB1O00241 ADGRA2-201ENST00000315215 6270 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
SIRPB1O00241 KMT5B-201ENST00000304363 5837 ntAPPRIS P1 TSL 5 BASIC17.79■□□□□ 0.44
SIRPB1O00241 IKBKG-206ENST00000594239 2299 ntAPPRIS P3 TSL 1 (best) BASIC17.79■□□□□ 0.44
SIRPB1O00241 FAM20C-201ENST00000313766 2751 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
SIRPB1O00241 AOC3-207ENST00000617500 2392 ntTSL 4 BASIC17.79■□□□□ 0.44
SIRPB1O00241 C8orf82-201ENST00000313465 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
SIRPB1O00241 E2F1-201ENST00000343380 2503 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
SIRPB1O00241 BCKDK-201ENST00000219794 2128 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
SIRPB1O00241 RGS20-202ENST00000297313 2104 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
SIRPB1O00241 LINC00454-202ENST00000430978 1327 ntTSL 5 BASIC17.78■□□□□ 0.44
SIRPB1O00241 ATP6V0A2-201ENST00000330342 6542 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
SIRPB1O00241 TBR1-202ENST00000410035 1454 ntTSL 2 BASIC17.78■□□□□ 0.44
SIRPB1O00241 GLTPD2-201ENST00000331264 1023 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
SIRPB1O00241 URAD-201ENST00000332715 931 ntAPPRIS P1 TSL 5 BASIC17.78■□□□□ 0.44
SIRPB1O00241 PROSER2-205ENST00000622831 1646 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
SIRPB1O00241 DCTD-202ENST00000438320 1972 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
SIRPB1O00241 FGFR2-211ENST00000369059 3003 ntTSL 5 BASIC17.78■□□□□ 0.44
SIRPB1O00241 NFIX-202ENST00000360105 5459 ntTSL 5 BASIC17.78■□□□□ 0.44
SIRPB1O00241 ZDHHC5-204ENST00000527985 2817 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
SIRPB1O00241 PTDSS2-201ENST00000308020 2445 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
SIRPB1O00241 CIZ1-203ENST00000357558 2907 ntAPPRIS ALT2 TSL 5 BASIC17.78■□□□□ 0.44
SIRPB1O00241 AL024507.2-201ENST00000606070 2574 ntBASIC17.78■□□□□ 0.44
SIRPB1O00241 PDCD2-203ENST00000443345 1897 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
SIRPB1O00241 LINC01089-202ENST00000429892 1521 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
SIRPB1O00241 BX005040.4-201ENST00000637145 1518 ntBASIC17.77■□□□□ 0.44
SIRPB1O00241 ZNF784-201ENST00000325351 2021 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
SIRPB1O00241 ANAPC4-201ENST00000315368 2685 ntAPPRIS P3 TSL 1 (best) BASIC17.77■□□□□ 0.44
SIRPB1O00241 HABP4-201ENST00000375249 2615 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
SIRPB1O00241 ZDHHC7-203ENST00000564466 1488 ntTSL 5 BASIC17.77■□□□□ 0.44
SIRPB1O00241 HPCAL1-201ENST00000307845 1751 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
SIRPB1O00241 KRTAP17-1-201ENST00000334202 779 ntAPPRIS P1 BASIC17.77■□□□□ 0.44
SIRPB1O00241 CALM1-202ENST00000447653 1104 ntAPPRIS ALT1 TSL 2 BASIC17.77■□□□□ 0.44
SIRPB1O00241 SIRT3-215ENST00000532956 1235 ntTSL 2 BASIC17.77■□□□□ 0.44
SIRPB1O00241 PTGDR-202ENST00000553372 1216 ntTSL 3 BASIC17.77■□□□□ 0.44
SIRPB1O00241 AL355102.2-201ENST00000553811 600 ntAPPRIS P1 TSL 2 BASIC17.77■□□□□ 0.44
SIRPB1O00241 AL390816.2-201ENST00000554252 737 ntTSL 3 BASIC17.77■□□□□ 0.44
SIRPB1O00241 SLC2A11-202ENST00000316185 1555 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
SIRPB1O00241 HLA-DPB1-211ENST00000418931 1560 ntAPPRIS P2 BASIC17.77■□□□□ 0.44
SIRPB1O00241 PBX4-201ENST00000251203 1724 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
SIRPB1O00241 MTX2-201ENST00000249442 1364 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
SIRPB1O00241 SMPD5-201ENST00000528912 1390 ntTSL 5 BASIC17.77■□□□□ 0.43
SIRPB1O00241 MXRA8-201ENST00000309212 2273 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
SIRPB1O00241 DAZAP2-201ENST00000412716 2598 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
SIRPB1O00241 RASGEF1C-201ENST00000361132 2243 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
SIRPB1O00241 PXYLP1-203ENST00000502783 2066 ntTSL 2 BASIC17.76■□□□□ 0.43
SIRPB1O00241 SPTBN4-207ENST00000595535 6105 ntTSL 5 BASIC17.76■□□□□ 0.43
SIRPB1O00241 PCSK1N-201ENST00000218230 1050 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
SIRPB1O00241 FXYD7-201ENST00000270310 712 ntAPPRIS P2 TSL 1 (best) BASIC17.76■□□□□ 0.43
SIRPB1O00241 NKX2-2-AS1-201ENST00000549659 638 ntTSL 5 BASIC17.76■□□□□ 0.43
SIRPB1O00241 C10orf55-202ENST00000412307 2360 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
SIRPB1O00241 DUSP2-201ENST00000288943 1688 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
SIRPB1O00241 AC005224.4-201ENST00000583262 1652 ntBASIC17.76■□□□□ 0.43
SIRPB1O00241 AC009014.1-201ENST00000607574 1667 ntAPPRIS P1 BASIC17.76■□□□□ 0.43
SIRPB1O00241 LRRC75A-203ENST00000470794 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
SIRPB1O00241 PABPC1L2B-201ENST00000373521 2197 ntAPPRIS P1 BASIC17.76■□□□□ 0.43
SIRPB1O00241 DBX2-201ENST00000332700 2806 ntAPPRIS P1 TSL 2 BASIC17.76■□□□□ 0.43
SIRPB1O00241 PRR7-201ENST00000323249 1480 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
SIRPB1O00241 ADGRL1-202ENST00000361434 5610 ntAPPRIS P3 TSL 1 (best) BASIC17.75■□□□□ 0.43
SIRPB1O00241 FAM3A-202ENST00000359889 1712 ntAPPRIS P1 TSL 2 BASIC17.75■□□□□ 0.43
SIRPB1O00241 KCNQ5-201ENST00000342056 6688 ntAPPRIS ALT1 TSL 5 BASIC17.75■□□□□ 0.43
SIRPB1O00241 UBALD1-201ENST00000283474 1413 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
SIRPB1O00241 CBWD3-202ENST00000377342 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
SIRPB1O00241 CXCL16-203ENST00000574412 1668 ntAPPRIS P2 TSL 1 (best) BASIC17.75■□□□□ 0.43
SIRPB1O00241 LSM14A-202ENST00000540746 2152 ntTSL 2 BASIC17.75■□□□□ 0.43
SIRPB1O00241 PDZRN4-202ENST00000402685 3347 ntAPPRIS P1 TSL 2 BASIC17.75■□□□□ 0.43
SIRPB1O00241 HBM-201ENST00000356815 506 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
SIRPB1O00241 FAM219A-202ENST00000379078 770 ntTSL 3 BASIC17.75■□□□□ 0.43
SIRPB1O00241 PRDX4-202ENST00000379341 1005 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
SIRPB1O00241 STOX2-205ENST00000513034 807 ntTSL 3 BASIC17.75■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 32.9 ms