Protein–RNA interactions for Protein: A0A1B0GX49

TRBV6-4, T-cell receptor beta variable 6-4 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV6-4A0A1B0GX49 ZDHHC14-203ENST00000359775 7380 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
TRBV6-4A0A1B0GX49 RAB24-201ENST00000303251 1311 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
TRBV6-4A0A1B0GX49 CELF2-213ENST00000633077 1733 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
TRBV6-4A0A1B0GX49 UBE2K-201ENST00000261427 5245 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
TRBV6-4A0A1B0GX49 MTX2-201ENST00000249442 1364 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
TRBV6-4A0A1B0GX49 LTK-201ENST00000263800 3046 ntAPPRIS P4 TSL 1 (best) BASIC14.88□□□□□ -0.03
TRBV6-4A0A1B0GX49 UBE2J2-201ENST00000347370 2387 ntTSL 3 BASIC14.88□□□□□ -0.03
TRBV6-4A0A1B0GX49 NAPEPLD-208ENST00000427257 1822 ntAPPRIS P1 TSL 2 BASIC14.88□□□□□ -0.03
TRBV6-4A0A1B0GX49 STOML2-201ENST00000356493 1278 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
TRBV6-4A0A1B0GX49 RORB-AS1-201ENST00000417576 1178 ntTSL 5 BASIC14.88□□□□□ -0.03
TRBV6-4A0A1B0GX49 SIRT3-215ENST00000532956 1235 ntTSL 2 BASIC14.88□□□□□ -0.03
TRBV6-4A0A1B0GX49 NKX2-2-AS1-201ENST00000549659 638 ntTSL 5 BASIC14.88□□□□□ -0.03
TRBV6-4A0A1B0GX49 TRAF4-217ENST00000618771 543 ntTSL 5 BASIC14.88□□□□□ -0.03
TRBV6-4A0A1B0GX49 AL358852.1-201ENST00000623174 1268 ntBASIC14.88□□□□□ -0.03
TRBV6-4A0A1B0GX49 STX5-203ENST00000394690 1568 ntTSL 5 BASIC14.88□□□□□ -0.03
TRBV6-4A0A1B0GX49 MALT1-201ENST00000345724 2866 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
TRBV6-4A0A1B0GX49 PMPCA-201ENST00000371717 2174 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
TRBV6-4A0A1B0GX49 AC005229.4-201ENST00000610085 2198 ntBASIC14.88□□□□□ -0.03
TRBV6-4A0A1B0GX49 HSD11B1L-201ENST00000301382 1457 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
TRBV6-4A0A1B0GX49 HMCES-203ENST00000417226 1490 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
TRBV6-4A0A1B0GX49 ZNF510-203ENST00000375231 5616 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
TRBV6-4A0A1B0GX49 YBX1-201ENST00000321358 1514 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
TRBV6-4A0A1B0GX49 KBTBD13-201ENST00000432196 1377 ntAPPRIS P1 BASIC14.87□□□□□ -0.03
TRBV6-4A0A1B0GX49 OLIG3-201ENST00000367734 2049 ntAPPRIS P1 BASIC14.87□□□□□ -0.03
TRBV6-4A0A1B0GX49 UBE2H-201ENST00000355621 5151 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
TRBV6-4A0A1B0GX49 MAP1LC3A-201ENST00000360668 1574 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
TRBV6-4A0A1B0GX49 UBALD1-201ENST00000283474 1413 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
TRBV6-4A0A1B0GX49 RASGEF1C-201ENST00000361132 2243 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
TRBV6-4A0A1B0GX49 C1QL1-201ENST00000253407 1295 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
TRBV6-4A0A1B0GX49 PARD6B-202ENST00000396039 522 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
TRBV6-4A0A1B0GX49 TPT1-AS1-211ENST00000520622 604 ntTSL 4 BASIC14.87□□□□□ -0.03
TRBV6-4A0A1B0GX49 AC127029.2-201ENST00000577329 502 ntTSL 3 BASIC14.87□□□□□ -0.03
TRBV6-4A0A1B0GX49 MRM1-203ENST00000612760 1284 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
TRBV6-4A0A1B0GX49 HIC1-207ENST00000619757 6711 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
TRBV6-4A0A1B0GX49 AL024507.2-201ENST00000606070 2574 ntBASIC14.87□□□□□ -0.03
TRBV6-4A0A1B0GX49 PTPN18-202ENST00000347849 2472 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
TRBV6-4A0A1B0GX49 CCDC107-205ENST00000421582 1324 ntAPPRIS ALT2 TSL 2 BASIC14.87□□□□□ -0.03
TRBV6-4A0A1B0GX49 FAHD1-202ENST00000382668 1845 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
TRBV6-4A0A1B0GX49 ANKRD53-204ENST00000457410 1671 ntTSL 5 BASIC14.87□□□□□ -0.03
TRBV6-4A0A1B0GX49 ADRM1-204ENST00000491935 1530 ntAPPRIS P1 TSL 5 BASIC14.87□□□□□ -0.03
TRBV6-4A0A1B0GX49 LYPD1-202ENST00000397463 1891 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
TRBV6-4A0A1B0GX49 CLN8-213ENST00000637156 1897 ntAPPRIS P1 TSL 5 BASIC14.86□□□□□ -0.03
TRBV6-4A0A1B0GX49 MEF2A-202ENST00000354410 5824 ntAPPRIS P3 TSL 1 (best) BASIC14.86□□□□□ -0.03
TRBV6-4A0A1B0GX49 CPNE9-203ENST00000383832 2068 ntAPPRIS P1 TSL 5 BASIC14.86□□□□□ -0.03
TRBV6-4A0A1B0GX49 EFHD1-201ENST00000264059 2259 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
TRBV6-4A0A1B0GX49 AMER2-202ENST00000515384 3197 ntAPPRIS P1 BASIC14.86□□□□□ -0.03
TRBV6-4A0A1B0GX49 SOX12-201ENST00000342665 4630 ntAPPRIS P1 BASIC14.86□□□□□ -0.03
TRBV6-4A0A1B0GX49 TMEM179B-205ENST00000533861 797 ntTSL 5 BASIC14.86□□□□□ -0.03
TRBV6-4A0A1B0GX49 MAPRE3-203ENST00000405074 1801 ntTSL 3 BASIC14.86□□□□□ -0.03
TRBV6-4A0A1B0GX49 SETD6-202ENST00000310682 2042 ntAPPRIS P3 TSL 2 BASIC14.86□□□□□ -0.03
TRBV6-4A0A1B0GX49 CHST8-202ENST00000434302 2225 ntAPPRIS P1 TSL 2 BASIC14.86□□□□□ -0.03
TRBV6-4A0A1B0GX49 ARPC5L-201ENST00000259477 1325 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
TRBV6-4A0A1B0GX49 EML2-201ENST00000245925 2264 ntAPPRIS P3 TSL 1 (best) BASIC14.86□□□□□ -0.03
TRBV6-4A0A1B0GX49 SLC35A3-210ENST00000638371 2298 ntTSL 5 BASIC14.86□□□□□ -0.03
TRBV6-4A0A1B0GX49 KCNH6-203ENST00000580652 1703 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
TRBV6-4A0A1B0GX49 RASSF1-203ENST00000359365 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC14.86□□□□□ -0.03
TRBV6-4A0A1B0GX49 CECR2-202ENST00000342247 6178 ntAPPRIS ALT2 TSL 5 BASIC14.86□□□□□ -0.03
TRBV6-4A0A1B0GX49 RAB24-202ENST00000303270 1385 ntTSL 2 BASIC14.85□□□□□ -0.03
TRBV6-4A0A1B0GX49 ZFAND2B-202ENST00000409097 1765 ntTSL 2 BASIC14.85□□□□□ -0.03
TRBV6-4A0A1B0GX49 COCH-205ENST00000475087 1997 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
TRBV6-4A0A1B0GX49 FBXO17-201ENST00000292852 2386 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
TRBV6-4A0A1B0GX49 KCNMB4-201ENST00000258111 4731 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
TRBV6-4A0A1B0GX49 RITA1-201ENST00000548278 2053 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
TRBV6-4A0A1B0GX49 AFDN-202ENST00000351017 5823 ntTSL 5 BASIC14.85□□□□□ -0.03
TRBV6-4A0A1B0GX49 TMEM125-201ENST00000432792 1850 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
TRBV6-4A0A1B0GX49 CXCL16-203ENST00000574412 1668 ntAPPRIS P2 TSL 1 (best) BASIC14.85□□□□□ -0.03
TRBV6-4A0A1B0GX49 GLTPD2-201ENST00000331264 1023 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
TRBV6-4A0A1B0GX49 LTC4S-202ENST00000401985 486 ntTSL 3 BASIC14.85□□□□□ -0.03
TRBV6-4A0A1B0GX49 NGEF-203ENST00000409079 1022 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
TRBV6-4A0A1B0GX49 PRKCQ-AS1-202ENST00000445427 1133 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
TRBV6-4A0A1B0GX49 PRKCQ-AS1-204ENST00000455810 920 ntTSL 2 BASIC14.85□□□□□ -0.03
TRBV6-4A0A1B0GX49 PAFAH1B2-205ENST00000529887 1056 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
TRBV6-4A0A1B0GX49 AP2S1-203ENST00000593442 636 ntTSL 2 BASIC14.85□□□□□ -0.03
TRBV6-4A0A1B0GX49 RAB1A-202ENST00000409751 1333 ntTSL 5 BASIC14.85□□□□□ -0.03
TRBV6-4A0A1B0GX49 AL049796.1-201ENST00000565336 1766 ntBASIC14.85□□□□□ -0.03
TRBV6-4A0A1B0GX49 KCNN4-201ENST00000262888 2240 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
TRBV6-4A0A1B0GX49 IRX2-201ENST00000302057 2456 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
TRBV6-4A0A1B0GX49 PDXDC1-205ENST00000535621 2048 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
TRBV6-4A0A1B0GX49 GRINA-202ENST00000395068 1814 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
TRBV6-4A0A1B0GX49 OAF-201ENST00000328965 2525 ntAPPRIS P2 TSL 1 (best) BASIC14.85□□□□□ -0.03
TRBV6-4A0A1B0GX49 USP48-205ENST00000421625 2818 ntTSL 2 BASIC14.84□□□□□ -0.03
TRBV6-4A0A1B0GX49 UPF3A-202ENST00000375299 2387 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
TRBV6-4A0A1B0GX49 MXRA8-201ENST00000309212 2273 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
TRBV6-4A0A1B0GX49 NME4-201ENST00000219479 995 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
TRBV6-4A0A1B0GX49 CDKN2D-201ENST00000335766 1086 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
TRBV6-4A0A1B0GX49 DCTN3-202ENST00000341694 899 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
TRBV6-4A0A1B0GX49 DCTN3-205ENST00000378916 773 ntTSL 2 BASIC14.84□□□□□ -0.03
TRBV6-4A0A1B0GX49 NME4-202ENST00000382940 766 ntTSL 3 BASIC14.84□□□□□ -0.03
TRBV6-4A0A1B0GX49 AC005775.1-201ENST00000592413 850 ntTSL 5 BASIC14.84□□□□□ -0.03
TRBV6-4A0A1B0GX49 AC005837.3-201ENST00000612163 286 ntBASIC14.84□□□□□ -0.03
TRBV6-4A0A1B0GX49 NME4-211ENST00000620944 1193 ntTSL 2 BASIC14.84□□□□□ -0.03
TRBV6-4A0A1B0GX49 EPHX3-201ENST00000221730 1822 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
TRBV6-4A0A1B0GX49 ARL6IP4-220ENST00000543566 1591 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
TRBV6-4A0A1B0GX49 TUBA1A-201ENST00000295766 1887 ntAPPRIS P1 TSL 2 BASIC14.84□□□□□ -0.03
TRBV6-4A0A1B0GX49 VPS13B-204ENST00000441350 1626 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
TRBV6-4A0A1B0GX49 UCK2-201ENST00000367879 1375 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
TRBV6-4A0A1B0GX49 DNM2-205ENST00000585892 2774 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
TRBV6-4A0A1B0GX49 DMRT2-203ENST00000358146 1965 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
TRBV6-4A0A1B0GX49 NABP2-202ENST00000341463 1411 ntAPPRIS P1 TSL 3 BASIC14.83□□□□□ -0.03
TRBV6-4A0A1B0GX49 ECHDC2-221ENST00000536120 1446 ntTSL 3 BASIC14.83□□□□□ -0.03
Retrieved 100 of 98,524 protein–RNA pairs in 20.7 ms