Protein–RNA interactions for Protein: A0A1B0GVL6

TMEM238L, HCG1800530, isoform CRA_b, humanhuman

Predictions only

Length 79 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM238LA0A1B0GVL6 CRMP1-201ENST00000324989 3146 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
TMEM238LA0A1B0GVL6 MDFIC-201ENST00000257724 4598 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
TMEM238LA0A1B0GVL6 MIR219A2-201ENST00000608502 1504 ntBASIC14.74□□□□□ -0.05
TMEM238LA0A1B0GVL6 ADCY3-201ENST00000260600 5050 ntAPPRIS P3 TSL 1 (best) BASIC14.74□□□□□ -0.05
TMEM238LA0A1B0GVL6 GATA6-AS1-202ENST00000583490 1788 ntTSL 2 BASIC14.74□□□□□ -0.05
TMEM238LA0A1B0GVL6 HDAC11-211ENST00000433119 2043 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
TMEM238LA0A1B0GVL6 SPG7-202ENST00000341316 2288 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
TMEM238LA0A1B0GVL6 RAB5A-201ENST00000273047 2536 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
TMEM238LA0A1B0GVL6 JMJD4-202ENST00000438896 2502 ntTSL 2 BASIC14.74□□□□□ -0.05
TMEM238LA0A1B0GVL6 NUTM2D-201ENST00000381697 3290 ntAPPRIS P5 TSL 1 (best) BASIC14.74□□□□□ -0.05
TMEM238LA0A1B0GVL6 AKAP17A-201ENST00000313871 3204 ntAPPRIS P2 TSL 1 (best) BASIC14.74□□□□□ -0.05
TMEM238LA0A1B0GVL6 MPV17L-201ENST00000287594 5820 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
TMEM238LA0A1B0GVL6 PCDHA13-203ENST00000617769 2427 ntAPPRIS ALT2 BASIC14.74□□□□□ -0.05
TMEM238LA0A1B0GVL6 GPR62-201ENST00000322241 2191 ntAPPRIS P1 BASIC14.74□□□□□ -0.05
TMEM238LA0A1B0GVL6 SPANXA2-OT1-201ENST00000622372 1686 ntTSL 2 BASIC14.74□□□□□ -0.05
TMEM238LA0A1B0GVL6 USP27X-201ENST00000621775 2618 ntAPPRIS P1 BASIC14.74□□□□□ -0.05
TMEM238LA0A1B0GVL6 USP13-201ENST00000263966 8323 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
TMEM238LA0A1B0GVL6 SUMF2-208ENST00000434526 2052 ntAPPRIS P3 TSL 1 (best) BASIC14.73□□□□□ -0.05
TMEM238LA0A1B0GVL6 C17orf67-201ENST00000397861 2013 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
TMEM238LA0A1B0GVL6 FARP1-242ENST00000627049 5103 ntTSL 5 BASIC14.73□□□□□ -0.05
TMEM238LA0A1B0GVL6 TMEM79-203ENST00000405535 2201 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
TMEM238LA0A1B0GVL6 SLC10A4-201ENST00000273861 1790 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
TMEM238LA0A1B0GVL6 TPD52-209ENST00000518937 2856 ntTSL 2 BASIC14.73□□□□□ -0.05
TMEM238LA0A1B0GVL6 PCDHA8-202ENST00000531613 5260 ntAPPRIS P2 TSL 1 (best) BASIC14.73□□□□□ -0.05
TMEM238LA0A1B0GVL6 ITGA9-201ENST00000264741 7889 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
TMEM238LA0A1B0GVL6 SMG5-201ENST00000361813 4559 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
TMEM238LA0A1B0GVL6 CNTNAP3B-212ENST00000617422 2170 ntTSL 2 BASIC14.73□□□□□ -0.05
TMEM238LA0A1B0GVL6 DNAJB5-201ENST00000312316 2391 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
TMEM238LA0A1B0GVL6 CNOT11-201ENST00000289382 2599 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
TMEM238LA0A1B0GVL6 RGS20-202ENST00000297313 2104 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
TMEM238LA0A1B0GVL6 CCDC151-201ENST00000356392 2107 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
TMEM238LA0A1B0GVL6 AC244517.3-201ENST00000616254 1235 ntBASIC14.73□□□□□ -0.05
TMEM238LA0A1B0GVL6 POLR3E-203ENST00000418581 2529 ntTSL 2 BASIC14.73□□□□□ -0.05
TMEM238LA0A1B0GVL6 PDZD8-201ENST00000334464 9699 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
TMEM238LA0A1B0GVL6 CHST1-201ENST00000308064 2718 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
TMEM238LA0A1B0GVL6 TOX2-201ENST00000341197 1880 ntAPPRIS P1 TSL 2 BASIC14.73□□□□□ -0.05
TMEM238LA0A1B0GVL6 NETO2-202ENST00000562435 7481 ntAPPRIS P3 TSL 1 (best) BASIC14.73□□□□□ -0.05
TMEM238LA0A1B0GVL6 WDR86-204ENST00000477459 1428 ntTSL 2 BASIC14.73□□□□□ -0.05
TMEM238LA0A1B0GVL6 AC016065.1-201ENST00000500118 2413 ntTSL 2 BASIC14.73□□□□□ -0.05
TMEM238LA0A1B0GVL6 NFIC-211ENST00000641145 8399 ntBASIC14.73□□□□□ -0.05
TMEM238LA0A1B0GVL6 TNFSF11-203ENST00000398795 2199 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
TMEM238LA0A1B0GVL6 BAZ1B-201ENST00000339594 6102 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
TMEM238LA0A1B0GVL6 NDUFAF6-203ENST00000396124 1798 ntAPPRIS P1 TSL 2 BASIC14.73□□□□□ -0.05
TMEM238LA0A1B0GVL6 AL591684.2-201ENST00000605970 1594 ntTSL 5 BASIC14.73□□□□□ -0.05
TMEM238LA0A1B0GVL6 SYBU-207ENST00000433638 3104 ntAPPRIS ALT2 TSL 5 BASIC14.72□□□□□ -0.05
TMEM238LA0A1B0GVL6 KMT5C-201ENST00000255613 2308 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
TMEM238LA0A1B0GVL6 MBD1-216ENST00000587605 1945 ntTSL 2 BASIC14.72□□□□□ -0.05
TMEM238LA0A1B0GVL6 ITGBL1-202ENST00000376180 2494 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
TMEM238LA0A1B0GVL6 UCHL5-206ENST00000367455 5327 ntAPPRIS P3 TSL 1 (best) BASIC14.72□□□□□ -0.05
TMEM238LA0A1B0GVL6 KRTAP5-AS1-201ENST00000424148 2265 ntTSL 2 BASIC14.72□□□□□ -0.05
TMEM238LA0A1B0GVL6 ENPP1-201ENST00000360971 7442 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
TMEM238LA0A1B0GVL6 NRP2-206ENST00000417189 2386 ntTSL 2 BASIC14.72□□□□□ -0.05
TMEM238LA0A1B0GVL6 LAGE3-201ENST00000357360 949 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
TMEM238LA0A1B0GVL6 TEAD2-208ENST00000598810 2191 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
TMEM238LA0A1B0GVL6 NMI-201ENST00000243346 1623 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
TMEM238LA0A1B0GVL6 VSX1-205ENST00000429762 1977 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
TMEM238LA0A1B0GVL6 PPRC1-201ENST00000278070 5330 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
TMEM238LA0A1B0GVL6 BAALC-203ENST00000309982 2831 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
TMEM238LA0A1B0GVL6 SPSB1-201ENST00000328089 3120 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
TMEM238LA0A1B0GVL6 SNAI3-AS1-202ENST00000563475 2081 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
TMEM238LA0A1B0GVL6 SERTAD3-201ENST00000322354 1734 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
TMEM238LA0A1B0GVL6 LRCH4-201ENST00000310300 2552 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
TMEM238LA0A1B0GVL6 TMEM110-201ENST00000355083 4769 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
TMEM238LA0A1B0GVL6 NRL-202ENST00000396997 1517 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
TMEM238LA0A1B0GVL6 TMEM44-211ENST00000473092 1508 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
TMEM238LA0A1B0GVL6 AC008105.1-201ENST00000587534 2003 ntTSL 2 BASIC14.71□□□□□ -0.05
TMEM238LA0A1B0GVL6 FGD5-201ENST00000285046 5720 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
TMEM238LA0A1B0GVL6 PDIA2-201ENST00000219406 1698 ntAPPRIS P2 TSL 1 (best) BASIC14.71□□□□□ -0.05
TMEM238LA0A1B0GVL6 METTL9-202ENST00000396014 1817 ntAPPRIS ALT1 TSL 1 (best) BASIC14.71□□□□□ -0.05
TMEM238LA0A1B0GVL6 IL6R-202ENST00000368485 5914 ntAPPRIS P4 TSL 1 (best) BASIC14.71□□□□□ -0.05
TMEM238LA0A1B0GVL6 STXBP6-203ENST00000419632 1970 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
TMEM238LA0A1B0GVL6 FAM129C-207ENST00000599124 1918 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.05
TMEM238LA0A1B0GVL6 AP000251.1-201ENST00000433071 822 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
TMEM238LA0A1B0GVL6 CIB2-204ENST00000557846 934 ntTSL 3 BASIC14.71□□□□□ -0.05
TMEM238LA0A1B0GVL6 TFRC-202ENST00000392396 5032 ntAPPRIS P3 TSL 1 (best) BASIC14.71□□□□□ -0.05
TMEM238LA0A1B0GVL6 UBE2Z-201ENST00000360943 3122 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
TMEM238LA0A1B0GVL6 GFRA3-201ENST00000274721 2039 ntAPPRIS P2 TSL 1 (best) BASIC14.71□□□□□ -0.05
TMEM238LA0A1B0GVL6 ZNF710-201ENST00000268154 4617 ntAPPRIS P1 TSL 2 BASIC14.71□□□□□ -0.06
TMEM238LA0A1B0GVL6 SLC9A6-201ENST00000370695 4725 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
TMEM238LA0A1B0GVL6 KCNT1-202ENST00000371757 4717 ntAPPRIS P3 TSL 1 (best) BASIC14.71□□□□□ -0.06
TMEM238LA0A1B0GVL6 RHBDD2-201ENST00000006777 1802 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
TMEM238LA0A1B0GVL6 CYP21A1P-201ENST00000342991 1971 ntTSL 3 BASIC14.71□□□□□ -0.06
TMEM238LA0A1B0GVL6 SPHK2-211ENST00000600537 2136 ntAPPRIS ALT2 TSL 2 BASIC14.71□□□□□ -0.06
TMEM238LA0A1B0GVL6 STMN3-201ENST00000370053 2255 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
TMEM238LA0A1B0GVL6 PDE1C-202ENST00000396182 2420 ntTSL 1 (best) BASIC14.71□□□□□ -0.06
TMEM238LA0A1B0GVL6 IRX6-201ENST00000290552 3128 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
TMEM238LA0A1B0GVL6 CRLF3-201ENST00000324238 2957 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
TMEM238LA0A1B0GVL6 GPR108-201ENST00000264080 2057 ntAPPRIS P2 TSL 1 (best) BASIC14.7□□□□□ -0.06
TMEM238LA0A1B0GVL6 GMDS-202ENST00000380815 1752 ntAPPRIS P3 TSL 1 (best) BASIC14.7□□□□□ -0.06
TMEM238LA0A1B0GVL6 RARRES2-202ENST00000466675 1618 ntAPPRIS P1 TSL 2 BASIC14.7□□□□□ -0.06
TMEM238LA0A1B0GVL6 KIF13A-207ENST00000502704 1330 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
TMEM238LA0A1B0GVL6 UBXN2A-202ENST00000404924 1557 ntAPPRIS P1 TSL 2 BASIC14.7□□□□□ -0.06
TMEM238LA0A1B0GVL6 IRF3-228ENST00000601291 1556 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
TMEM238LA0A1B0GVL6 DISC1-220ENST00000602873 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC14.7□□□□□ -0.06
TMEM238LA0A1B0GVL6 ECHDC1-214ENST00000474289 2443 ntAPPRIS P3 TSL 5 BASIC14.7□□□□□ -0.06
TMEM238LA0A1B0GVL6 TCEA1-211ENST00000522635 1432 ntTSL 2 BASIC14.7□□□□□ -0.06
TMEM238LA0A1B0GVL6 GRB10-206ENST00000402497 2289 ntTSL 5 BASIC14.7□□□□□ -0.06
TMEM238LA0A1B0GVL6 PCMT1-205ENST00000464889 1984 ntAPPRIS P3 TSL 1 (best) BASIC14.7□□□□□ -0.06
TMEM238LA0A1B0GVL6 HECTD1-201ENST00000399332 9134 ntAPPRIS P1 TSL 5 BASIC14.7□□□□□ -0.06
TMEM238LA0A1B0GVL6 FSTL3-201ENST00000166139 2542 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Retrieved 100 of 98,524 protein–RNA pairs in 25.4 ms