Protein–RNA interactions for Protein: A0A0B4J271

TRAV12-3, T-cell receptor alpha variable 12-3 (Fragment), humanhuman

Predictions only

Length 114 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV12-3A0A0B4J271 SPRN-201ENST00000414069 3128 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
TRAV12-3A0A0B4J271 RSPO1-201ENST00000356545 2621 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
TRAV12-3A0A0B4J271 CENPS-CORT-201ENST00000400900 1469 ntTSL 2 BASIC15.65■□□□□ 0.1
TRAV12-3A0A0B4J271 HSF2BP-201ENST00000291560 1899 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
TRAV12-3A0A0B4J271 VRK2-201ENST00000340157 1888 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.1
TRAV12-3A0A0B4J271 LLGL2-202ENST00000375227 1374 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
TRAV12-3A0A0B4J271 AC003102.1-202ENST00000563394 1796 ntBASIC15.65■□□□□ 0.1
TRAV12-3A0A0B4J271 ZNF48-201ENST00000320159 3234 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
TRAV12-3A0A0B4J271 SLC26A5-209ENST00000393735 1947 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
TRAV12-3A0A0B4J271 PPP3CC-203ENST00000397775 2094 ntTSL 2 BASIC15.65■□□□□ 0.1
TRAV12-3A0A0B4J271 HES4-201ENST00000304952 899 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
TRAV12-3A0A0B4J271 C20orf144-201ENST00000375222 571 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
TRAV12-3A0A0B4J271 CAMTA1-208ENST00000473578 567 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
TRAV12-3A0A0B4J271 GNA12-201ENST00000275364 4378 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
TRAV12-3A0A0B4J271 CAPG-201ENST00000263867 1442 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
TRAV12-3A0A0B4J271 PLEKHM2-202ENST00000375799 4122 ntAPPRIS P2 TSL 1 (best) BASIC15.65■□□□□ 0.1
TRAV12-3A0A0B4J271 PABPC1L2B-201ENST00000373521 2197 ntAPPRIS P1 BASIC15.65■□□□□ 0.1
TRAV12-3A0A0B4J271 SLC25A39-201ENST00000225308 1607 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.1
TRAV12-3A0A0B4J271 NEU4-204ENST00000405370 1907 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
TRAV12-3A0A0B4J271 RGS20-202ENST00000297313 2104 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
TRAV12-3A0A0B4J271 SLC1A6-203ENST00000544886 2420 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
TRAV12-3A0A0B4J271 LRRC45-201ENST00000306688 2701 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
TRAV12-3A0A0B4J271 PRADC1-201ENST00000258083 1083 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
TRAV12-3A0A0B4J271 SETD6-202ENST00000310682 2042 ntAPPRIS P3 TSL 2 BASIC15.64■□□□□ 0.09
TRAV12-3A0A0B4J271 IL20RA-202ENST00000367746 1244 ntTSL 2 BASIC15.64■□□□□ 0.09
TRAV12-3A0A0B4J271 HM13-AS1-201ENST00000412178 489 ntTSL 3 BASIC15.64■□□□□ 0.09
TRAV12-3A0A0B4J271 TUSC3-209ENST00000509380 1266 ntTSL 5 BASIC15.64■□□□□ 0.09
TRAV12-3A0A0B4J271 RELL2-205ENST00000518856 1419 ntTSL 5 BASIC15.64■□□□□ 0.09
TRAV12-3A0A0B4J271 NDUFS3-206ENST00000528192 561 ntTSL 5 BASIC15.64■□□□□ 0.09
TRAV12-3A0A0B4J271 GGA2-211ENST00000567468 1713 ntTSL 2 BASIC15.64■□□□□ 0.09
TRAV12-3A0A0B4J271 HOMER3-206ENST00000594439 982 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
TRAV12-3A0A0B4J271 DOCK9-206ENST00000427887 4176 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
TRAV12-3A0A0B4J271 PITPNC1-201ENST00000299954 6359 ntAPPRIS ALT2 TSL 5 BASIC15.64■□□□□ 0.09
TRAV12-3A0A0B4J271 THEM6-201ENST00000336138 2259 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
TRAV12-3A0A0B4J271 IKBKG-206ENST00000594239 2299 ntAPPRIS P3 TSL 1 (best) BASIC15.64■□□□□ 0.09
TRAV12-3A0A0B4J271 POLR2F-205ENST00000442738 2106 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
TRAV12-3A0A0B4J271 GCH1-202ENST00000395514 1977 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
TRAV12-3A0A0B4J271 AIRN-201ENST00000601203 4374 ntBASIC15.64■□□□□ 0.09
TRAV12-3A0A0B4J271 DOCK5-208ENST00000481100 2166 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
TRAV12-3A0A0B4J271 CDC14A-203ENST00000370124 1883 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
TRAV12-3A0A0B4J271 VDAC1-203ENST00000395047 1873 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
TRAV12-3A0A0B4J271 PABPC1L-202ENST00000217074 1263 ntTSL 5 BASIC15.63■□□□□ 0.09
TRAV12-3A0A0B4J271 INS-202ENST00000381330 597 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
TRAV12-3A0A0B4J271 LRRC75A-AS1-202ENST00000470491 1057 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
TRAV12-3A0A0B4J271 CHTF8-208ENST00000522091 863 ntTSL 2 BASIC15.63■□□□□ 0.09
TRAV12-3A0A0B4J271 LINC02136-201ENST00000567469 530 ntTSL 4 BASIC15.63■□□□□ 0.09
TRAV12-3A0A0B4J271 SMUG1P1-201ENST00000590640 811 ntBASIC15.63■□□□□ 0.09
TRAV12-3A0A0B4J271 MADCAM1-208ENST00000621286 1203 ntAPPRIS ALT2 TSL 5 BASIC15.63■□□□□ 0.09
TRAV12-3A0A0B4J271 SUDS3-204ENST00000543473 4897 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
TRAV12-3A0A0B4J271 LSM14A-202ENST00000540746 2152 ntTSL 2 BASIC15.63■□□□□ 0.09
TRAV12-3A0A0B4J271 CFAP97-205ENST00000514798 2895 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
TRAV12-3A0A0B4J271 APPL2-201ENST00000258530 3239 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
TRAV12-3A0A0B4J271 BCL7A-203ENST00000538010 6247 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
TRAV12-3A0A0B4J271 FOSL1-201ENST00000312562 1669 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
TRAV12-3A0A0B4J271 C16orf59-201ENST00000361837 1662 ntAPPRIS P2 TSL 1 (best) BASIC15.63■□□□□ 0.09
TRAV12-3A0A0B4J271 FBXL22-201ENST00000360587 1526 ntAPPRIS P2 TSL 1 (best) BASIC15.63■□□□□ 0.09
TRAV12-3A0A0B4J271 RELA-201ENST00000308639 2681 ntAPPRIS ALT1 TSL 1 (best) BASIC15.62■□□□□ 0.09
TRAV12-3A0A0B4J271 ITGB1BP1-203ENST00000359712 2126 ntTSL 2 BASIC15.62■□□□□ 0.09
TRAV12-3A0A0B4J271 PEX5-204ENST00000412720 2105 ntTSL 2 BASIC15.62■□□□□ 0.09
TRAV12-3A0A0B4J271 DYM-203ENST00000442713 2147 ntTSL 2 BASIC15.62■□□□□ 0.09
TRAV12-3A0A0B4J271 DNAJA4-202ENST00000394852 3116 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
TRAV12-3A0A0B4J271 CYHR1-201ENST00000306145 1409 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
TRAV12-3A0A0B4J271 FARSA-201ENST00000314606 1814 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
TRAV12-3A0A0B4J271 KCNN4-201ENST00000262888 2240 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
TRAV12-3A0A0B4J271 CNOT6-201ENST00000261951 6176 ntAPPRIS P1 TSL 5 BASIC15.62■□□□□ 0.09
TRAV12-3A0A0B4J271 SLC26A1-203ENST00000398520 1111 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
TRAV12-3A0A0B4J271 AC099791.1-201ENST00000416440 715 ntBASIC15.62■□□□□ 0.09
TRAV12-3A0A0B4J271 GRAMD4P2-201ENST00000423297 1097 ntBASIC15.62■□□□□ 0.09
TRAV12-3A0A0B4J271 IGHV3-19-201ENST00000521488 291 ntBASIC15.62■□□□□ 0.09
TRAV12-3A0A0B4J271 AICDA-202ENST00000537228 667 ntTSL 5 BASIC15.62■□□□□ 0.09
TRAV12-3A0A0B4J271 CTAG1A-201ENST00000593606 993 ntTSL 5 BASIC15.62■□□□□ 0.09
TRAV12-3A0A0B4J271 GRAMD4P4-201ENST00000613563 1115 ntBASIC15.62■□□□□ 0.09
TRAV12-3A0A0B4J271 BAG1-212ENST00000641048 1038 ntAPPRIS P3 BASIC15.62■□□□□ 0.09
TRAV12-3A0A0B4J271 SPOP-206ENST00000504102 1865 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
TRAV12-3A0A0B4J271 C1QL4-201ENST00000334221 2071 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
TRAV12-3A0A0B4J271 SDK1-202ENST00000404826 10397 ntAPPRIS P2 TSL 1 (best) BASIC15.62■□□□□ 0.09
TRAV12-3A0A0B4J271 BBC3-202ENST00000341983 1538 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
TRAV12-3A0A0B4J271 AP006587.3-201ENST00000525742 1516 ntBASIC15.62■□□□□ 0.09
TRAV12-3A0A0B4J271 AVPR2-203ENST00000370049 1307 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
TRAV12-3A0A0B4J271 AL024507.2-201ENST00000606070 2574 ntBASIC15.62■□□□□ 0.09
TRAV12-3A0A0B4J271 ASL-203ENST00000380839 1765 ntTSL 5 BASIC15.62■□□□□ 0.09
TRAV12-3A0A0B4J271 MAP7D1-201ENST00000316156 3456 ntAPPRIS ALT2 TSL 1 (best) BASIC15.62■□□□□ 0.09
TRAV12-3A0A0B4J271 CACNA1B-203ENST00000371355 9647 ntAPPRIS ALT2 TSL 5 BASIC15.62■□□□□ 0.09
TRAV12-3A0A0B4J271 RASGEF1C-201ENST00000361132 2243 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
TRAV12-3A0A0B4J271 GSN-204ENST00000373818 2657 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
TRAV12-3A0A0B4J271 ZNF446-208ENST00000622313 1884 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
TRAV12-3A0A0B4J271 BCKDK-201ENST00000219794 2128 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
TRAV12-3A0A0B4J271 NFKBIL1-203ENST00000376148 1478 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
TRAV12-3A0A0B4J271 C8orf82-201ENST00000313465 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC15.61■□□□□ 0.09
TRAV12-3A0A0B4J271 MAPK8IP3-216ENST00000610761 5626 ntAPPRIS ALT1 TSL 1 (best) BASIC15.61■□□□□ 0.09
TRAV12-3A0A0B4J271 CCKBR-206ENST00000532715 1734 ntTSL 3 BASIC15.61■□□□□ 0.09
TRAV12-3A0A0B4J271 SERTAD4-AS1-202ENST00000475406 591 ntTSL 2 BASIC15.61■□□□□ 0.09
TRAV12-3A0A0B4J271 AL359317.1-201ENST00000556316 578 ntTSL 4 BASIC15.61■□□□□ 0.09
TRAV12-3A0A0B4J271 AC093249.6-202ENST00000568500 1142 ntTSL 2 BASIC15.61■□□□□ 0.09
TRAV12-3A0A0B4J271 ADARB1-201ENST00000348831 6882 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
TRAV12-3A0A0B4J271 SETD9-211ENST00000628593 1306 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
TRAV12-3A0A0B4J271 GAL3ST3-201ENST00000312006 2133 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
TRAV12-3A0A0B4J271 CPAMD8-202ENST00000388925 5355 ntTSL 5 BASIC15.6■□□□□ 0.09
TRAV12-3A0A0B4J271 ABHD12B-201ENST00000337334 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC15.6■□□□□ 0.09
TRAV12-3A0A0B4J271 SEC22C-207ENST00000423701 1458 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
Retrieved 100 of 98,524 protein–RNA pairs in 19.8 ms