Protein–RNA interactions for Protein: A0A0B4J246

TRAV8-4, T-cell receptor alpha variable 8-4 (Fragment), humanhuman

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV8-4A0A0B4J246 DLX2-201ENST00000234198 2453 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
TRAV8-4A0A0B4J246 KAZN-208ENST00000636203 6874 ntTSL 5 BASIC14.7□□□□□ -0.06
TRAV8-4A0A0B4J246 KBTBD11-201ENST00000320248 6710 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
TRAV8-4A0A0B4J246 NOMO2-201ENST00000330537 4352 ntAPPRIS ALT2 TSL 5 BASIC14.7□□□□□ -0.06
TRAV8-4A0A0B4J246 CDK5-204ENST00000485972 1758 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
TRAV8-4A0A0B4J246 MEF2A-207ENST00000558812 2186 ntTSL 2 BASIC14.7□□□□□ -0.06
TRAV8-4A0A0B4J246 VGF-201ENST00000249330 2575 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
TRAV8-4A0A0B4J246 SSUH2-217ENST00000544814 1636 ntAPPRIS ALT2 TSL 2 BASIC14.7□□□□□ -0.06
TRAV8-4A0A0B4J246 NUDT4-202ENST00000415493 4839 ntAPPRIS ALT1 TSL 1 (best) BASIC14.69□□□□□ -0.06
TRAV8-4A0A0B4J246 SMIM11B-205ENST00000624304 1863 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
TRAV8-4A0A0B4J246 ST3GAL4-209ENST00000526727 1967 ntAPPRIS ALT1 TSL 1 (best) BASIC14.69□□□□□ -0.06
TRAV8-4A0A0B4J246 SYT6-210ENST00000641643 1587 ntBASIC14.69□□□□□ -0.06
TRAV8-4A0A0B4J246 CLN6-201ENST00000249806 2243 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
TRAV8-4A0A0B4J246 MCC-208ENST00000514701 2855 ntTSL 2 BASIC14.69□□□□□ -0.06
TRAV8-4A0A0B4J246 TRADD-202ENST00000486556 1833 ntTSL 2 BASIC14.69□□□□□ -0.06
TRAV8-4A0A0B4J246 PILRB-207ENST00000448382 2314 ntTSL 2 BASIC14.69□□□□□ -0.06
TRAV8-4A0A0B4J246 CERS6-201ENST00000305747 7217 ntAPPRIS P3 TSL 2 BASIC14.69□□□□□ -0.06
TRAV8-4A0A0B4J246 EMC9-201ENST00000216799 835 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
TRAV8-4A0A0B4J246 UBE2C-202ENST00000335046 737 ntTSL 2 BASIC14.69□□□□□ -0.06
TRAV8-4A0A0B4J246 AC006455.2-201ENST00000429931 906 ntBASIC14.69□□□□□ -0.06
TRAV8-4A0A0B4J246 OR2I1P-207ENST00000453522 948 ntBASIC14.69□□□□□ -0.06
TRAV8-4A0A0B4J246 FAM66C-205ENST00000456135 1216 ntTSL 5 BASIC14.69□□□□□ -0.06
TRAV8-4A0A0B4J246 AC084116.4-201ENST00000524320 484 ntTSL 2 BASIC14.69□□□□□ -0.06
TRAV8-4A0A0B4J246 AC010336.5-201ENST00000594308 317 ntTSL 3 BASIC14.69□□□□□ -0.06
TRAV8-4A0A0B4J246 TIMM50-201ENST00000314349 1612 ntAPPRIS P2 TSL 1 (best) BASIC14.69□□□□□ -0.06
TRAV8-4A0A0B4J246 WISP2-203ENST00000372868 1600 ntAPPRIS P1 TSL 3 BASIC14.69□□□□□ -0.06
TRAV8-4A0A0B4J246 MYCBPAP-202ENST00000419930 1640 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
TRAV8-4A0A0B4J246 KREMEN2-203ENST00000571007 1877 ntTSL 2 BASIC14.69□□□□□ -0.06
TRAV8-4A0A0B4J246 DAG1-219ENST00000538711 5582 ntAPPRIS P1 TSL 5 BASIC14.69□□□□□ -0.06
TRAV8-4A0A0B4J246 ADCK2-203ENST00000476491 2092 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
TRAV8-4A0A0B4J246 CNTD2-202ENST00000430325 1817 ntAPPRIS P2 TSL 2 BASIC14.69□□□□□ -0.06
TRAV8-4A0A0B4J246 DPP7-201ENST00000371579 1590 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
TRAV8-4A0A0B4J246 TMEM65-201ENST00000297632 9029 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
TRAV8-4A0A0B4J246 TMEM161A-202ENST00000450333 1930 ntTSL 2 BASIC14.68□□□□□ -0.06
TRAV8-4A0A0B4J246 Z83844.2-201ENST00000456099 1945 ntTSL 2 BASIC14.68□□□□□ -0.06
TRAV8-4A0A0B4J246 B3GALT4-204ENST00000451237 1694 ntAPPRIS P1 BASIC14.68□□□□□ -0.06
TRAV8-4A0A0B4J246 CCDC130-201ENST00000221554 1792 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
TRAV8-4A0A0B4J246 FNBP1-202ENST00000420781 5410 ntAPPRIS ALT1 TSL 1 (best) BASIC14.68□□□□□ -0.06
TRAV8-4A0A0B4J246 TBX1-203ENST00000359500 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
TRAV8-4A0A0B4J246 ANKRD44-204ENST00000409919 1622 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
TRAV8-4A0A0B4J246 C4orf36-201ENST00000295898 881 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
TRAV8-4A0A0B4J246 AURKAIP1-204ENST00000378853 875 ntAPPRIS P1 TSL 2 BASIC14.68□□□□□ -0.06
TRAV8-4A0A0B4J246 NDUFAF8-201ENST00000431388 615 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
TRAV8-4A0A0B4J246 QDPR-206ENST00000508623 601 ntTSL 3 BASIC14.68□□□□□ -0.06
TRAV8-4A0A0B4J246 SENCR-201ENST00000526269 1298 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
TRAV8-4A0A0B4J246 TRAF7-203ENST00000565383 799 ntTSL 5 BASIC14.68□□□□□ -0.06
TRAV8-4A0A0B4J246 TMC6-218ENST00000591436 1155 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
TRAV8-4A0A0B4J246 RASSF1-AS1-201ENST00000629828 790 ntBASIC14.68□□□□□ -0.06
TRAV8-4A0A0B4J246 AL031602.1-201ENST00000633169 911 ntBASIC14.68□□□□□ -0.06
TRAV8-4A0A0B4J246 GRAMD1B-217ENST00000640939 1212 ntTSL 5 BASIC14.68□□□□□ -0.06
TRAV8-4A0A0B4J246 RDX-204ENST00000528498 2511 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
TRAV8-4A0A0B4J246 PHF12-205ENST00000577226 7679 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
TRAV8-4A0A0B4J246 THOP1-201ENST00000307741 4804 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
TRAV8-4A0A0B4J246 MTCH2-201ENST00000302503 2587 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
TRAV8-4A0A0B4J246 ALG1-201ENST00000262374 2132 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
TRAV8-4A0A0B4J246 DCHS2-201ENST00000339452 5064 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
TRAV8-4A0A0B4J246 AC139530.1-201ENST00000575312 1977 ntBASIC14.67□□□□□ -0.06
TRAV8-4A0A0B4J246 KDM5C-204ENST00000375401 6031 ntAPPRIS P3 TSL 1 (best) BASIC14.67□□□□□ -0.06
TRAV8-4A0A0B4J246 SYNM-204ENST00000594047 6407 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
TRAV8-4A0A0B4J246 PPP3CC-201ENST00000240139 2189 ntAPPRIS P3 TSL 1 (best) BASIC14.67□□□□□ -0.06
TRAV8-4A0A0B4J246 FAM167A-204ENST00000528897 1620 ntAPPRIS P1 TSL 2 BASIC14.67□□□□□ -0.06
TRAV8-4A0A0B4J246 EXTL3-201ENST00000220562 6483 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
TRAV8-4A0A0B4J246 ZNF410-206ENST00000540593 1722 ntTSL 2 BASIC14.67□□□□□ -0.06
TRAV8-4A0A0B4J246 DUX4-203ENST00000565211 1710 ntAPPRIS P2 TSL 1 (best) BASIC14.67□□□□□ -0.06
TRAV8-4A0A0B4J246 ARHGEF28-204ENST00000437974 5792 ntAPPRIS P3 TSL 1 (best) BASIC14.67□□□□□ -0.06
TRAV8-4A0A0B4J246 HSD17B14-201ENST00000263278 1238 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
TRAV8-4A0A0B4J246 NAXE-201ENST00000368233 1012 ntTSL 2 BASIC14.67□□□□□ -0.06
TRAV8-4A0A0B4J246 TMEM80-201ENST00000397510 1094 ntAPPRIS P2 TSL 5 BASIC14.67□□□□□ -0.06
TRAV8-4A0A0B4J246 HES6-206ENST00000409574 738 ntTSL 2 BASIC14.67□□□□□ -0.06
TRAV8-4A0A0B4J246 CNEP1R1-202ENST00000427478 2117 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
TRAV8-4A0A0B4J246 TMEM218-215ENST00000532407 1103 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
TRAV8-4A0A0B4J246 LY6H-205ENST00000615409 980 ntAPPRIS P3 TSL 1 (best) BASIC14.67□□□□□ -0.06
TRAV8-4A0A0B4J246 TCEA1-214ENST00000640382 1234 ntTSL 5 BASIC14.67□□□□□ -0.06
TRAV8-4A0A0B4J246 STX4-202ENST00000394998 1498 ntTSL 2 BASIC14.67□□□□□ -0.06
TRAV8-4A0A0B4J246 NPY4R-201ENST00000374312 1956 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
TRAV8-4A0A0B4J246 FAHD1-201ENST00000382666 1964 ntTSL 2 BASIC14.67□□□□□ -0.06
TRAV8-4A0A0B4J246 AC092490.1-203ENST00000514568 1972 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
TRAV8-4A0A0B4J246 NPY4R2-201ENST00000576178 1956 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
TRAV8-4A0A0B4J246 AC080038.3-201ENST00000623346 1952 ntBASIC14.67□□□□□ -0.06
TRAV8-4A0A0B4J246 FDFT1-201ENST00000220584 2176 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
TRAV8-4A0A0B4J246 ASRGL1-201ENST00000301776 2182 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
TRAV8-4A0A0B4J246 ZNF668-209ENST00000539836 2469 ntTSL 5 BASIC14.67□□□□□ -0.06
TRAV8-4A0A0B4J246 AP1S1-201ENST00000337619 1306 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
TRAV8-4A0A0B4J246 STAP2-206ENST00000600324 1508 ntAPPRIS P3 TSL 2 BASIC14.66□□□□□ -0.06
TRAV8-4A0A0B4J246 WDR86-207ENST00000621812 1542 ntTSL 5 BASIC14.66□□□□□ -0.06
TRAV8-4A0A0B4J246 JUNB-201ENST00000302754 1820 ntAPPRIS P1 BASIC14.66□□□□□ -0.06
TRAV8-4A0A0B4J246 GPR6-202ENST00000414000 1945 ntTSL 2 BASIC14.66□□□□□ -0.06
TRAV8-4A0A0B4J246 SOAT2-201ENST00000301466 2044 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
TRAV8-4A0A0B4J246 DMRTA2-202ENST00000418121 2840 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
TRAV8-4A0A0B4J246 LACTB-202ENST00000413507 2978 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
TRAV8-4A0A0B4J246 PLEKHH3-204ENST00000591022 2983 ntAPPRIS P2 TSL 1 (best) BASIC14.66□□□□□ -0.06
TRAV8-4A0A0B4J246 DAZAP2-201ENST00000412716 2598 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
TRAV8-4A0A0B4J246 RCN1-201ENST00000054950 2572 ntAPPRIS P2 TSL 1 (best) BASIC14.66□□□□□ -0.06
TRAV8-4A0A0B4J246 STRADB-201ENST00000194530 2293 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
TRAV8-4A0A0B4J246 BIN1-209ENST00000393040 2293 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
TRAV8-4A0A0B4J246 STX4-201ENST00000313843 1481 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
TRAV8-4A0A0B4J246 CCNG2-204ENST00000502280 1459 ntAPPRIS P1 TSL 2 BASIC14.66□□□□□ -0.06
TRAV8-4A0A0B4J246 BCR-201ENST00000305877 7082 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
TRAV8-4A0A0B4J246 PLEKHF1-204ENST00000592810 1357 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
TRAV8-4A0A0B4J246 PCMTD2-202ENST00000299468 1049 ntTSL 5 BASIC14.66□□□□□ -0.06
Retrieved 100 of 98,524 protein–RNA pairs in 15.3 ms