Protein–RNA interactions for Protein: A0A0A6YYK6

TRAV16, T-cell receptor alpha variable 16 (Fragment), humanhuman

Predicted RBP Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV16A0A0A6YYK6 ARHGEF28-203ENST00000426542 6118 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
TRAV16A0A0A6YYK6 PPAN-201ENST00000253107 1657 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
TRAV16A0A0A6YYK6 FAM129C-212ENST00000601861 2180 ntAPPRIS ALT2 TSL 2 BASIC14.64□□□□□ -0.07
TRAV16A0A0A6YYK6 BID-215ENST00000622694 2199 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
TRAV16A0A0A6YYK6 MMP17-201ENST00000360564 2411 ntAPPRIS P2 TSL 1 (best) BASIC14.64□□□□□ -0.07
TRAV16A0A0A6YYK6 VEGFA-204ENST00000372064 2909 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
TRAV16A0A0A6YYK6 GFER-201ENST00000248114 2345 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
TRAV16A0A0A6YYK6 SHCBP1L-201ENST00000367547 2317 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
TRAV16A0A0A6YYK6 AC008878.3-201ENST00000617428 4964 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
TRAV16A0A0A6YYK6 AL591684.2-201ENST00000605970 1594 ntTSL 5 BASIC14.64□□□□□ -0.07
TRAV16A0A0A6YYK6 TRMT2A-204ENST00000439169 2473 ntTSL 5 BASIC14.64□□□□□ -0.07
TRAV16A0A0A6YYK6 KLF16-201ENST00000250916 2890 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
TRAV16A0A0A6YYK6 COMT-206ENST00000407537 1457 ntAPPRIS P3 TSL 5 BASIC14.63□□□□□ -0.07
TRAV16A0A0A6YYK6 DIO3-201ENST00000510508 2102 ntAPPRIS P1 BASIC14.63□□□□□ -0.07
TRAV16A0A0A6YYK6 TMEM206-205ENST00000535273 2119 ntTSL 2 BASIC14.63□□□□□ -0.07
TRAV16A0A0A6YYK6 PGRMC2-201ENST00000296425 2767 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
TRAV16A0A0A6YYK6 CACNB1-201ENST00000344140 1889 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
TRAV16A0A0A6YYK6 ARSA-202ENST00000356098 1895 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
TRAV16A0A0A6YYK6 CXCR3-201ENST00000373691 1861 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
TRAV16A0A0A6YYK6 UBN1-201ENST00000262376 6252 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
TRAV16A0A0A6YYK6 PLEKHG5-212ENST00000537245 4794 ntAPPRIS ALT2 TSL 2 BASIC14.63□□□□□ -0.07
TRAV16A0A0A6YYK6 UTS2R-201ENST00000313135 1357 ntAPPRIS P1 BASIC14.63□□□□□ -0.07
TRAV16A0A0A6YYK6 C1QTNF1-207ENST00000580454 1396 ntAPPRIS P1 TSL 5 BASIC14.63□□□□□ -0.07
TRAV16A0A0A6YYK6 RPUSD1-202ENST00000561734 2159 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
TRAV16A0A0A6YYK6 TBC1D22A-206ENST00000407381 1949 ntTSL 5 BASIC14.63□□□□□ -0.07
TRAV16A0A0A6YYK6 BAD-203ENST00000394532 1157 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
TRAV16A0A0A6YYK6 AC136475.3-202ENST00000534742 812 ntTSL 2 BASIC14.63□□□□□ -0.07
TRAV16A0A0A6YYK6 FAM228B-208ENST00000613899 1238 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
TRAV16A0A0A6YYK6 SBNO2-201ENST00000361757 4923 ntAPPRIS P4 TSL 1 (best) BASIC14.63□□□□□ -0.07
TRAV16A0A0A6YYK6 QSOX2-201ENST00000358701 4530 ntAPPRIS P1 TSL 2 BASIC14.63□□□□□ -0.07
TRAV16A0A0A6YYK6 JAG1-201ENST00000254958 6048 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
TRAV16A0A0A6YYK6 MUS81-201ENST00000308110 2392 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
TRAV16A0A0A6YYK6 GAS2-202ENST00000454584 2286 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
TRAV16A0A0A6YYK6 DVL1-204ENST00000610709 2268 ntTSL 2 BASIC14.63□□□□□ -0.07
TRAV16A0A0A6YYK6 ST3GAL4-202ENST00000356132 1745 ntTSL 5 BASIC14.63□□□□□ -0.07
TRAV16A0A0A6YYK6 SLC35A3-208ENST00000638336 2438 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
TRAV16A0A0A6YYK6 SLC13A3-204ENST00000413164 2008 ntTSL 2 BASIC14.63□□□□□ -0.07
TRAV16A0A0A6YYK6 ILF3-217ENST00000589998 2622 ntTSL 2 BASIC14.62□□□□□ -0.07
TRAV16A0A0A6YYK6 OSR1-201ENST00000272223 1936 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
TRAV16A0A0A6YYK6 CORO1B-202ENST00000393893 1931 ntAPPRIS P1 TSL 5 BASIC14.62□□□□□ -0.07
TRAV16A0A0A6YYK6 RBM38-203ENST00000356208 2382 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
TRAV16A0A0A6YYK6 EHMT1-203ENST00000460843 5137 ntAPPRIS P2 TSL 5 BASIC14.62□□□□□ -0.07
TRAV16A0A0A6YYK6 SLC25A22-228ENST00000628067 2692 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
TRAV16A0A0A6YYK6 PDIA2-201ENST00000219406 1698 ntAPPRIS P2 TSL 1 (best) BASIC14.62□□□□□ -0.07
TRAV16A0A0A6YYK6 DPYS-201ENST00000351513 2127 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
TRAV16A0A0A6YYK6 LYSMD4-210ENST00000545021 2431 ntTSL 4 BASIC14.62□□□□□ -0.07
TRAV16A0A0A6YYK6 LHX6-201ENST00000340587 3457 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
TRAV16A0A0A6YYK6 SRD5A1P1-201ENST00000442297 786 ntBASIC14.62□□□□□ -0.07
TRAV16A0A0A6YYK6 AC087742.1-201ENST00000575880 1738 ntBASIC14.62□□□□□ -0.07
TRAV16A0A0A6YYK6 DISC1-220ENST00000602873 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
TRAV16A0A0A6YYK6 MIR663AHG-233ENST00000609248 830 ntTSL 5 BASIC14.62□□□□□ -0.07
TRAV16A0A0A6YYK6 AC241377.3-202ENST00000626088 1088 ntBASIC14.62□□□□□ -0.07
TRAV16A0A0A6YYK6 AC241585.3-202ENST00000628937 1088 ntBASIC14.62□□□□□ -0.07
TRAV16A0A0A6YYK6 AC245100.8-202ENST00000629247 1058 ntBASIC14.62□□□□□ -0.07
TRAV16A0A0A6YYK6 PFKFB3-219ENST00000640683 2311 ntTSL 5 BASIC14.62□□□□□ -0.07
TRAV16A0A0A6YYK6 CDC14B-203ENST00000375242 2965 ntTSL 2 BASIC14.62□□□□□ -0.07
TRAV16A0A0A6YYK6 MYL5-206ENST00000506838 2956 ntTSL 2 BASIC14.62□□□□□ -0.07
TRAV16A0A0A6YYK6 FAM46B-201ENST00000289166 2368 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
TRAV16A0A0A6YYK6 POLE2-202ENST00000539565 1792 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
TRAV16A0A0A6YYK6 ARL6IP4-201ENST00000315580 1644 ntAPPRIS P3 TSL 1 (best) BASIC14.62□□□□□ -0.07
TRAV16A0A0A6YYK6 PEX7-201ENST00000318471 1464 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
TRAV16A0A0A6YYK6 ARFRP1-214ENST00000622789 2559 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
TRAV16A0A0A6YYK6 ADCY6-202ENST00000357869 5748 ntTSL 2 BASIC14.62□□□□□ -0.07
TRAV16A0A0A6YYK6 LINC01006-201ENST00000333319 2292 ntBASIC14.62□□□□□ -0.07
TRAV16A0A0A6YYK6 TERF2IP-201ENST00000300086 2118 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
TRAV16A0A0A6YYK6 IRF7-201ENST00000330243 1992 ntAPPRIS P4 TSL 5 BASIC14.62□□□□□ -0.07
TRAV16A0A0A6YYK6 SPPL2B-212ENST00000618220 2459 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
TRAV16A0A0A6YYK6 LINC01547-202ENST00000397841 2303 ntTSL 2 BASIC14.61□□□□□ -0.07
TRAV16A0A0A6YYK6 FP325331.1-202ENST00000623531 1380 ntBASIC14.61□□□□□ -0.07
TRAV16A0A0A6YYK6 SIGLEC15-201ENST00000389474 1573 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
TRAV16A0A0A6YYK6 GFRA4-201ENST00000290417 1427 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
TRAV16A0A0A6YYK6 SDSL-202ENST00000403593 1449 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
TRAV16A0A0A6YYK6 MALT1-202ENST00000348428 9368 ntAPPRIS P4 TSL 1 (best) BASIC14.61□□□□□ -0.07
TRAV16A0A0A6YYK6 TTYH1-203ENST00000376531 1763 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
TRAV16A0A0A6YYK6 WDTC1-201ENST00000319394 4819 ntAPPRIS ALT1 TSL 1 (best) BASIC14.61□□□□□ -0.07
TRAV16A0A0A6YYK6 C1QTNF1-201ENST00000311661 2624 ntTSL 2 BASIC14.61□□□□□ -0.07
TRAV16A0A0A6YYK6 MARCH9-201ENST00000266643 2982 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
TRAV16A0A0A6YYK6 CTAG1B-202ENST00000359887 998 ntTSL 2 BASIC14.61□□□□□ -0.07
TRAV16A0A0A6YYK6 CHKB-AS1-201ENST00000380711 578 ntTSL 2 BASIC14.61□□□□□ -0.07
TRAV16A0A0A6YYK6 P2RY2-203ENST00000393597 2107 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
TRAV16A0A0A6YYK6 HDHD5-203ENST00000399852 1118 ntTSL 3 BASIC14.61□□□□□ -0.07
TRAV16A0A0A6YYK6 DPP10-AS1-201ENST00000432658 730 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
TRAV16A0A0A6YYK6 RPP21-222ENST00000433076 577 ntTSL 2 BASIC14.61□□□□□ -0.07
TRAV16A0A0A6YYK6 DGKZ-214ENST00000527911 3337 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
TRAV16A0A0A6YYK6 VSX1-205ENST00000429762 1977 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
TRAV16A0A0A6YYK6 CHST2-201ENST00000309575 4582 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
TRAV16A0A0A6YYK6 RALY-203ENST00000375114 6430 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
TRAV16A0A0A6YYK6 TMEM44-211ENST00000473092 1508 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
TRAV16A0A0A6YYK6 HEG1-201ENST00000311127 9156 ntAPPRIS P1 TSL 5 BASIC14.61□□□□□ -0.07
TRAV16A0A0A6YYK6 SHKBP1-225ENST00000600733 2284 ntTSL 5 BASIC14.61□□□□□ -0.07
TRAV16A0A0A6YYK6 MMEL1-206ENST00000502556 1943 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
TRAV16A0A0A6YYK6 PLCG1-202ENST00000373271 7395 ntAPPRIS ALT1 TSL 1 (best) BASIC14.6□□□□□ -0.07
TRAV16A0A0A6YYK6 ACOT2-201ENST00000238651 1774 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
TRAV16A0A0A6YYK6 PAQR6-215ENST00000623241 1961 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
TRAV16A0A0A6YYK6 AVPR2-201ENST00000337474 1622 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
TRAV16A0A0A6YYK6 AC009102.2-201ENST00000606772 1639 ntBASIC14.6□□□□□ -0.07
TRAV16A0A0A6YYK6 AC144652.1-201ENST00000609974 1624 ntBASIC14.6□□□□□ -0.07
TRAV16A0A0A6YYK6 TRADD-202ENST00000486556 1833 ntTSL 2 BASIC14.6□□□□□ -0.07
TRAV16A0A0A6YYK6 GOLGA2P6-201ENST00000340929 2049 ntBASIC14.6□□□□□ -0.07
TRAV16A0A0A6YYK6 INSM2-201ENST00000307169 3013 ntAPPRIS P1 BASIC14.6□□□□□ -0.07
Retrieved 100 of 98,524 protein–RNA pairs in 46.4 ms