Protein–RNA interactions for Protein: P04436

T-cell receptor alpha chain V region HPB-MLT (Fragment), humanhuman

Predictions only

Length 131 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P04436 Metazoa_SRP.201-201ENST00000622034 282 ntBASIC10□□□□□ -0.81
P04436 AC005858.2-201ENST00000624721 426 ntBASIC10□□□□□ -0.81
P04436 TEX2-201ENST00000258991 5232 ntAPPRIS P3 TSL 1 (best) BASIC10□□□□□ -0.81
P04436 LY6G5B-207ENST00000375864 2654 ntAPPRIS P2 TSL 1 (best) BASIC10□□□□□ -0.81
P04436 CUL2-202ENST00000374748 4312 ntAPPRIS P1 TSL 5 BASIC10□□□□□ -0.81
P04436 SIRPB1-202ENST00000279477 2207 ntAPPRIS ALT2 TSL 1 (best) BASIC10□□□□□ -0.81
P04436 UTY-204ENST00000382893 1539 ntTSL 2 BASIC10□□□□□ -0.81
P04436 SEC22B-201ENST00000578049 6922 ntAPPRIS P1 TSL 1 (best) BASIC10□□□□□ -0.81
P04436 Z97192.1-201ENST00000391625 3894 ntTSL 2 BASIC10□□□□□ -0.81
P04436 CLN3-238ENST00000569430 3867 ntAPPRIS P1 TSL 5 BASIC10□□□□□ -0.81
P04436 DNAI2-205ENST00000579490 2475 ntAPPRIS ALT2 TSL 1 (best) BASIC10□□□□□ -0.81
P04436 PCID2-201ENST00000246505 1786 ntTSL 2 BASIC10□□□□□ -0.81
P04436 LIMK2-202ENST00000333611 3462 ntAPPRIS ALT1 TSL 1 (best) BASIC10□□□□□ -0.81
P04436 KIAA0895-202ENST00000317020 4241 ntTSL 1 (best) BASIC10□□□□□ -0.81
P04436 FSD2-201ENST00000334574 6418 ntAPPRIS P1 TSL 1 (best) BASIC10□□□□□ -0.81
P04436 PRKCQ-201ENST00000263125 3285 ntAPPRIS P1 TSL 1 (best) BASIC10□□□□□ -0.81
P04436 RBFOX1-208ENST00000547372 3524 ntTSL 5 BASIC10□□□□□ -0.81
P04436 ZNF100-206ENST00000608416 1840 ntAPPRIS P1 TSL 5 BASIC10□□□□□ -0.81
P04436 BRCC3-204ENST00000369462 2846 ntTSL 1 (best) BASIC10□□□□□ -0.81
P04436 EGF-201ENST00000265171 4880 ntAPPRIS P1 TSL 1 (best) BASIC10□□□□□ -0.81
P04436 SH2D4A-201ENST00000265807 3352 ntAPPRIS P3 TSL 2 BASIC10□□□□□ -0.81
P04436 ULK4-201ENST00000301831 4613 ntAPPRIS P1 TSL 2 BASIC10□□□□□ -0.81
P04436 DDR1-239ENST00000452441 3857 ntAPPRIS ALT2 TSL 1 (best) BASIC10□□□□□ -0.81
P04436 CHRNB1-202ENST00000536404 1623 ntTSL 2 BASIC10□□□□□ -0.81
P04436 EPC1-201ENST00000263062 2913 ntTSL 1 (best) BASIC10□□□□□ -0.81
P04436 IDH1-203ENST00000415913 2441 ntAPPRIS P1 TSL 1 (best) BASIC9.99□□□□□ -0.81
P04436 NSUN4-204ENST00000474844 2150 ntAPPRIS P1 TSL 1 (best) BASIC9.99□□□□□ -0.81
P04436 AC005324.4-204ENST00000413242 4262 ntAPPRIS P5 TSL 2 BASIC9.99□□□□□ -0.81
P04436 SEPT10-203ENST00000397714 2719 ntAPPRIS P1 TSL 2 BASIC9.99□□□□□ -0.81
P04436 PYGL-205ENST00000532462 2711 ntTSL 1 (best) BASIC9.99□□□□□ -0.81
P04436 BNC2-210ENST00000545497 3750 ntTSL 1 (best) BASIC9.99□□□□□ -0.81
P04436 AL662899.3-201ENST00000375880 2487 ntAPPRIS P1 TSL 3 BASIC9.99□□□□□ -0.81
P04436 CSE1L-201ENST00000262982 3553 ntAPPRIS P1 TSL 1 (best) BASIC9.99□□□□□ -0.81
P04436 CR2-203ENST00000367059 3877 ntTSL 1 (best) BASIC9.99□□□□□ -0.81
P04436 MST1R-202ENST00000344206 4198 ntAPPRIS ALT2 TSL 5 BASIC9.99□□□□□ -0.81
P04436 PRKN-206ENST00000366898 4180 ntAPPRIS P1 TSL 1 (best) BASIC9.99□□□□□ -0.81
P04436 SLC38A1-210ENST00000552197 2599 ntTSL 1 (best) BASIC9.99□□□□□ -0.81
P04436 ALDH7A1-228ENST00000636886 2321 ntTSL 5 BASIC9.99□□□□□ -0.81
P04436 TIA1-205ENST00000433529 4647 ntTSL 2 BASIC9.99□□□□□ -0.81
P04436 ABI1-204ENST00000376138 3503 ntTSL 1 (best) BASIC9.99□□□□□ -0.81
P04436 EDA2R-201ENST00000253392 957 ntAPPRIS ALT2 TSL 1 (best) BASIC9.99□□□□□ -0.81
P04436 PAEP-202ENST00000371766 851 ntAPPRIS P1 TSL 1 (best) BASIC9.99□□□□□ -0.81
P04436 PAGE3-201ENST00000374951 745 ntAPPRIS P1 TSL 1 (best) BASIC9.99□□□□□ -0.81
P04436 TAS2R40-201ENST00000408947 1043 ntAPPRIS P1 BASIC9.99□□□□□ -0.81
P04436 ZDHHC20P4-201ENST00000411421 1007 ntBASIC9.99□□□□□ -0.81
P04436 AC073464.2-201ENST00000412994 343 ntBASIC9.99□□□□□ -0.81
P04436 CHCHD2P4-201ENST00000418701 434 ntBASIC9.99□□□□□ -0.81
P04436 LINC01251-202ENST00000444956 486 ntTSL 2 BASIC9.99□□□□□ -0.81
P04436 AC069155.1-201ENST00000452736 575 ntTSL 2 BASIC9.99□□□□□ -0.81
P04436 AL357055.1-201ENST00000457967 410 ntBASIC9.99□□□□□ -0.81
P04436 RN7SL40P-201ENST00000474689 342 ntBASIC9.99□□□□□ -0.81
P04436 AC127070.1-201ENST00000488441 484 ntBASIC9.99□□□□□ -0.81
P04436 CRYZP2-201ENST00000504217 1049 ntBASIC9.99□□□□□ -0.81
P04436 AC118282.3-201ENST00000512142 556 ntBASIC9.99□□□□□ -0.81
P04436 ARHGEF38-IT1-201ENST00000512262 456 ntTSL 3 BASIC9.99□□□□□ -0.81
P04436 CTD-2270F17.1-201ENST00000518387 1215 ntTSL 1 (best) BASIC9.99□□□□□ -0.81
P04436 NDUFA12-206ENST00000547986 487 ntTSL 2 BASIC9.99□□□□□ -0.81
P04436 GPATCH2L-209ENST00000556663 2112 ntTSL 2 BASIC9.99□□□□□ -0.81
P04436 LINC02169-201ENST00000561336 540 ntTSL 2 BASIC9.99□□□□□ -0.81
P04436 AC134312.5-202ENST00000562705 756 ntTSL 3 BASIC9.99□□□□□ -0.81
P04436 AC018552.4-201ENST00000563251 556 ntTSL 4 BASIC9.99□□□□□ -0.81
P04436 RRN3-206ENST00000564131 1001 ntTSL 1 (best) BASIC9.99□□□□□ -0.81
P04436 C17orf62-215ENST00000578913 563 ntTSL 2 BASIC9.99□□□□□ -0.81
P04436 IGFL1P1-201ENST00000599950 360 ntBASIC9.99□□□□□ -0.81
P04436 AC009061.2-204ENST00000602476 524 ntTSL 3 BASIC9.99□□□□□ -0.81
P04436 KIZ-210ENST00000619189 2130 ntAPPRIS P4 TSL 1 (best) BASIC9.99□□□□□ -0.81
P04436 AKT3-204ENST00000366540 1575 ntTSL 1 (best) BASIC9.99□□□□□ -0.81
P04436 CARMN-209ENST00000602315 2706 ntTSL 5 BASIC9.99□□□□□ -0.81
P04436 ANKLE2-208ENST00000542282 3302 ntTSL 1 (best) BASIC9.99□□□□□ -0.81
P04436 TRAF3IP2-208ENST00000392556 2188 ntTSL 1 (best) BASIC9.99□□□□□ -0.81
P04436 AC096636.1-201ENST00000625140 3618 ntBASIC9.99□□□□□ -0.81
P04436 MPP4-205ENST00000409474 2462 ntAPPRIS P1 TSL 1 (best) BASIC9.99□□□□□ -0.81
P04436 SALL1-201ENST00000251020 5146 ntAPPRIS P1 TSL 1 (best) BASIC9.99□□□□□ -0.81
P04436 CDC42EP3-206ENST00000611976 5124 ntAPPRIS P1 TSL 3 BASIC9.99□□□□□ -0.81
P04436 RBFOX1-224ENST00000641259 3651 ntBASIC9.99□□□□□ -0.81
P04436 DCBLD2-202ENST00000326857 3959 ntTSL 1 (best) BASIC9.99□□□□□ -0.81
P04436 VN1R2-201ENST00000341702 1311 ntAPPRIS P1 BASIC9.99□□□□□ -0.81
P04436 LINC02128-203ENST00000576842 2248 ntTSL 3 BASIC9.99□□□□□ -0.81
P04436 PCDHGA9-202ENST00000616887 2568 ntAPPRIS ALT2 BASIC9.99□□□□□ -0.81
P04436 C3orf52-201ENST00000264848 2277 ntAPPRIS P3 TSL 1 (best) BASIC9.99□□□□□ -0.81
P04436 NXF5-207ENST00000537026 1991 ntAPPRIS ALT2 TSL 5 BASIC9.99□□□□□ -0.81
P04436 ARHGAP36-206ENST00000639280 2685 ntTSL 1 (best) BASIC9.99□□□□□ -0.81
P04436 MBLAC2-201ENST00000316610 4280 ntAPPRIS P1 TSL 1 (best) BASIC9.99□□□□□ -0.81
P04436 PTAR1-201ENST00000340434 1417 ntAPPRIS P1 TSL 1 (best) BASIC9.99□□□□□ -0.81
P04436 SLC45A3-201ENST00000367145 3341 ntAPPRIS P1 TSL 1 (best) BASIC9.99□□□□□ -0.81
P04436 TREML4-201ENST00000341495 2070 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
P04436 VANGL1-203ENST00000369509 2062 ntAPPRIS P3 TSL 1 (best) BASIC9.98□□□□□ -0.81
P04436 ODF2-213ENST00000448249 2059 ntTSL 2 BASIC9.98□□□□□ -0.81
P04436 FP565324.1-201ENST00000636427 3659 ntAPPRIS P1 TSL 5 BASIC9.98□□□□□ -0.81
P04436 PDE2A-201ENST00000334456 4315 ntAPPRIS P3 TSL 1 (best) BASIC9.98□□□□□ -0.81
P04436 MEOX1-201ENST00000318579 2707 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
P04436 KIAA0141-202ENST00000432126 4970 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
P04436 NEK1-206ENST00000510533 5377 ntTSL 1 (best) BASIC9.98□□□□□ -0.81
P04436 GOLGA8DP-201ENST00000314246 2786 ntTSL 2 BASIC9.98□□□□□ -0.81
P04436 NOP2-223ENST00000620535 2791 ntTSL 1 (best) BASIC9.98□□□□□ -0.81
P04436 AP5M1-202ENST00000431972 1815 ntTSL 2 BASIC9.98□□□□□ -0.81
P04436 SEMA3E-201ENST00000307792 6476 ntAPPRIS P3 TSL 1 (best) BASIC9.98□□□□□ -0.81
P04436 KIF26B-201ENST00000366518 12113 ntTSL 5 BASIC9.98□□□□□ -0.81
P04436 PLSCR4-203ENST00000433593 2839 ntTSL 2 BASIC9.98□□□□□ -0.81
P04436 CALCOCO1-201ENST00000262059 5866 ntAPPRIS ALT1 TSL 2 BASIC9.98□□□□□ -0.81
Retrieved 100 of 98,524 protein–RNA pairs in 53.3 ms