RNA–Protein interactions for RNA: ENST00000611976.1

CDC42EP3-206, Transcript of CDC42 effector protein 3, humanhuman

APPRIS P1 TSL 3 BASIC

Gene CDC42EP3, Length 5,124 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP3-206ENST00000611976 NISCHQ9Y2I1 1504 aa19.31■□□□□ 0.68
CDC42EP3-206ENST00000611976 DCAF8L2P0C7V8 631 aa18.39■□□□□ 0.53
CDC42EP3-206ENST00000611976 SUPT5HO00267 1087 aaKnown RBP18.12■□□□□ 0.49
CDC42EP3-206ENST00000611976 SHROOM4Q9ULL8 1493 aa17.93■□□□□ 0.46
CDC42EP3-206ENST00000611976 PCGF6Q9BYE7 350 aa17.24■□□□□ 0.35
CDC42EP3-206ENST00000611976 EHMT2Q96KQ7 1210 aa17.09■□□□□ 0.33
CDC42EP3-206ENST00000611976 ZEB1P37275 1124 aaPredicted RBP17.04■□□□□ 0.32
CDC42EP3-206ENST00000611976 FAM9AQ8IZU1 332 aaPredicted RBP16.94■□□□□ 0.3
CDC42EP3-206ENST00000611976 PELP1Q8IZL8 1130 aaKnown RBP16.9■□□□□ 0.3
CDC42EP3-206ENST00000611976 TRIM41Q8WV44 630 aa16.87■□□□□ 0.29
CDC42EP3-206ENST00000611976 HRCP23327 699 aa16.84■□□□□ 0.29
CDC42EP3-206ENST00000611976 APLP2Q06481 763 aa16.83■□□□□ 0.29
CDC42EP3-206ENST00000611976 CENPBP07199 599 aaPredicted RBP16.74■□□□□ 0.27
CDC42EP3-206ENST00000611976 CHIC1Q5VXU3 224 aa16.72■□□□□ 0.27
CDC42EP3-206ENST00000611976 TRIM26Q12899 539 aaPredicted RBP16.72■□□□□ 0.27
CDC42EP3-206ENST00000611976 CCER1Q8TC90 406 aaPredicted RBP16.68■□□□□ 0.26
CDC42EP3-206ENST00000611976 TTBK1Q5TCY1 1321 aaPredicted RBP16.6■□□□□ 0.25
CDC42EP3-206ENST00000611976 LOC105371045A0A1W2PR82 267 aa16.46■□□□□ 0.23
CDC42EP3-206ENST00000611976 UBTFP17480 764 aaKnown RBP16.43■□□□□ 0.22
CDC42EP3-206ENST00000611976 MYT1Q01538 1121 aa16.4■□□□□ 0.22
CDC42EP3-206ENST00000611976 PPARGC1BQ86YN6 1023 aaKnown RBP16.33■□□□□ 0.21
CDC42EP3-206ENST00000611976 RANGAP1P46060 587 aaPredicted RBP16.28■□□□□ 0.2
CDC42EP3-206ENST00000611976 YTHDC1Q96MU7 727 aaKnown RBP16.22■□□□□ 0.19
CDC42EP3-206ENST00000611976 ZCCHC6Q5VYS8 1495 aaKnown RBP16.16■□□□□ 0.18
CDC42EP3-206ENST00000611976 NEFLP07196 543 aa16.08■□□□□ 0.16
CDC42EP3-206ENST00000611976 ERICH6Q7L0X2 663 aa16.08■□□□□ 0.16
CDC42EP3-206ENST00000611976 DCAF1Q9Y4B6 1507 aa16.05■□□□□ 0.16
CDC42EP3-206ENST00000611976 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.02■□□□□ 0.16
CDC42EP3-206ENST00000611976 DIEXFQ68CQ4 756 aaKnown RBP16.02■□□□□ 0.15
CDC42EP3-206ENST00000611976 ATP1B4Q9UN42 357 aaPredicted RBP16.02■□□□□ 0.15
CDC42EP3-206ENST00000611976 CCDC180Q9P1Z9 1646 aa15.99■□□□□ 0.15
CDC42EP3-206ENST00000611976 HNRNPUL2Q1KMD3 747 aaKnown RBP15.95■□□□□ 0.14
CDC42EP3-206ENST00000611976 ABCC9O60706 1549 aa15.85■□□□□ 0.13
CDC42EP3-206ENST00000611976 ITGAEP38570 1179 aa15.79■□□□□ 0.12
CDC42EP3-206ENST00000611976 GTF3C3Q9Y5Q9 886 aa15.76■□□□□ 0.11
CDC42EP3-206ENST00000611976 MYO15BQ96JP2 1530 aa15.76■□□□□ 0.11
CDC42EP3-206ENST00000611976 ACIN1Q9UKV3 1341 aaKnown RBP15.73■□□□□ 0.11
CDC42EP3-206ENST00000611976 ZNF316A6NFI3 1004 aaPredicted RBP15.73■□□□□ 0.11
CDC42EP3-206ENST00000611976 SCRIBQ14160 1630 aa15.7■□□□□ 0.1
CDC42EP3-206ENST00000611976 CSRNP3Q8WYN3 585 aa15.63■□□□□ 0.09
CDC42EP3-206ENST00000611976 PABPN1Q86U42 306 aaKnown RBP eCLIP15.52■□□□□ 0.07
CDC42EP3-206ENST00000611976 FAM50AQ14320 339 aaKnown RBP15.51■□□□□ 0.07
CDC42EP3-206ENST00000611976 CLSPNQ9HAW4 1339 aa15.48■□□□□ 0.07
CDC42EP3-206ENST00000611976 RSF1Q96T23 1441 aaPredicted RBP15.47■□□□□ 0.07
CDC42EP3-206ENST00000611976 NEUROD1Q13562 356 aa15.42■□□□□ 0.06
CDC42EP3-206ENST00000611976 ANP32CO43423 234 aa15.41■□□□□ 0.06
CDC42EP3-206ENST00000611976 POLR3GLQ9BT43 218 aa15.41■□□□□ 0.06
CDC42EP3-206ENST00000611976 SCAF1Q9H7N4 1312 aaKnown RBP15.4■□□□□ 0.06
CDC42EP3-206ENST00000611976 DAXXQ9UER7 740 aaPredicted RBP15.35■□□□□ 0.05
CDC42EP3-206ENST00000611976 BCANQ96GW7 911 aa15.34■□□□□ 0.05
CDC42EP3-206ENST00000611976 EEA1Q15075 1411 aa15.34■□□□□ 0.05
CDC42EP3-206ENST00000611976 RB1CC1Q8TDY2 1594 aa15.33■□□□□ 0.04
CDC42EP3-206ENST00000611976 TRIM52Q96A61 297 aa15.3■□□□□ 0.04
CDC42EP3-206ENST00000611976 CDK11AQ9UQ88 783 aaPredicted RBP15.28■□□□□ 0.04
CDC42EP3-206ENST00000611976 CEP162Q5TB80 1403 aa15.27■□□□□ 0.04
CDC42EP3-206ENST00000611976 RTL5Q5HYW3 569 aaPredicted RBP15.26■□□□□ 0.03
CDC42EP3-206ENST00000611976 GOLGA3Q08378 1498 aa15.25■□□□□ 0.03
CDC42EP3-206ENST00000611976 NACADO15069 1562 aa15.25■□□□□ 0.03
CDC42EP3-206ENST00000611976 CNGB1Q14028 1251 aaPredicted RBP15.24■□□□□ 0.03
CDC42EP3-206ENST00000611976 CLIP1P30622 1438 aa15.23■□□□□ 0.03
CDC42EP3-206ENST00000611976 TNIKQ9UKE5 1360 aa15.2■□□□□ 0.02
CDC42EP3-206ENST00000611976 MIER1Q8N108 512 aa15.17■□□□□ 0.02
CDC42EP3-206ENST00000611976 TONSLQ96HA7 1378 aa15.12■□□□□ 0.01
CDC42EP3-206ENST00000611976 P3H3Q8IVL6 736 aa15.12■□□□□ 0.01
CDC42EP3-206ENST00000611976 FKBP8Q14318 412 aa15.12■□□□□ 0.01
CDC42EP3-206ENST00000611976 BAZ1AQ9NRL2 1556 aaPredicted RBP15.11■□□□□ 0.01
CDC42EP3-206ENST00000611976 CEP164Q9UPV0 1460 aa15.1■□□□□ 0.01
CDC42EP3-206ENST00000611976 WRNQ14191 1432 aaPredicted RBP eCLIP15.1■□□□□ 0.01
CDC42EP3-206ENST00000611976 MYT1LQ9UL68 1186 aa15.07■□□□□ 0
CDC42EP3-206ENST00000611976 DDX10Q13206 875 aaKnown RBP15.07■□□□□ 0
CDC42EP3-206ENST00000611976 ZNF326Q5BKZ1 582 aaKnown RBP15.04■□□□□ -0
CDC42EP3-206ENST00000611976 CECR2Q9BXF3 1484 aa15.03■□□□□ -0
CDC42EP3-206ENST00000611976 HNRNPUQ00839 825 aaKnown RBP eCLIP14.99□□□□□ -0.01
CDC42EP3-206ENST00000611976 ANP32AP39687 249 aaKnown RBP14.98□□□□□ -0.01
CDC42EP3-206ENST00000611976 MROH2BQ7Z745 1585 aa14.94□□□□□ -0.02
CDC42EP3-206ENST00000611976 BAZ1BQ9UIG0 1483 aaKnown RBP14.93□□□□□ -0.02
CDC42EP3-206ENST00000611976 SOGA1O94964 1423 aa14.91□□□□□ -0.02
CDC42EP3-206ENST00000611976 KIF27Q86VH2 1401 aa14.89□□□□□ -0.03
CDC42EP3-206ENST00000611976 SLC4A1APQ9BWU0 796 aaKnown RBP14.89□□□□□ -0.03
CDC42EP3-206ENST00000611976 MTUS2Q5JR59 1369 aa14.89□□□□□ -0.03
CDC42EP3-206ENST00000611976 VPS8Q8N3P4 1428 aa14.86□□□□□ -0.03
CDC42EP3-206ENST00000611976 FAM9BQ8IZU0 186 aa14.85□□□□□ -0.03
CDC42EP3-206ENST00000611976 ARID3CA6NKF2 412 aa14.85□□□□□ -0.03
CDC42EP3-206ENST00000611976 CCDC88BA6NC98 1476 aa14.84□□□□□ -0.03
CDC42EP3-206ENST00000611976 ABCC8Q09428 1581 aa14.83□□□□□ -0.03
CDC42EP3-206ENST00000611976 ZNF777Q9ULD5 760 aaPredicted RBP14.81□□□□□ -0.04
CDC42EP3-206ENST00000611976 TOP2AP11388 1531 aaKnown RBP14.8□□□□□ -0.04
CDC42EP3-206ENST00000611976 MRS2Q9HD23 443 aa14.8□□□□□ -0.04
CDC42EP3-206ENST00000611976 CCNB3Q8WWL7 1395 aa14.79□□□□□ -0.04
CDC42EP3-206ENST00000611976 EIF4G2P78344 907 aaKnown RBP eCLIP14.79□□□□□ -0.04
CDC42EP3-206ENST00000611976 FBLN2P98095 1184 aa14.79□□□□□ -0.04
CDC42EP3-206ENST00000611976 WIZO95785 1651 aa14.79□□□□□ -0.04
CDC42EP3-206ENST00000611976 CHIC2Q9UKJ5 165 aa14.79□□□□□ -0.04
CDC42EP3-206ENST00000611976 SUPT16HQ9Y5B9 1047 aaKnown RBP14.78□□□□□ -0.04
CDC42EP3-206ENST00000611976 ANP32EQ9BTT0 268 aa14.77□□□□□ -0.05
CDC42EP3-206ENST00000611976 HIRIP3Q9BW71 556 aaPredicted RBP14.77□□□□□ -0.05
CDC42EP3-206ENST00000611976 CCDC136Q96JN2 1154 aa14.76□□□□□ -0.05
CDC42EP3-206ENST00000611976 CANXP27824 592 aaKnown RBP14.76□□□□□ -0.05
CDC42EP3-206ENST00000611976 NPM2Q86SE8 214 aaKnown RBP14.76□□□□□ -0.05
CDC42EP3-206ENST00000611976 TIMELESSQ9UNS1 1208 aa14.74□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms