Protein–RNA interactions for Protein: Q9Y6M4

CSNK1G3, Casein kinase I isoform gamma-3, humanhuman

Predictions only

Length 447 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1G3Q9Y6M4 LIMD2-202ENST00000578061 756 ntAPPRIS P1 TSL 2 BASIC20.72■□□□□ 0.91
CSNK1G3Q9Y6M4 OR10C1-204ENST00000622521 1039 ntBASIC20.72■□□□□ 0.91
CSNK1G3Q9Y6M4 TMEM191A-211ENST00000637163 1067 ntBASIC20.72■□□□□ 0.91
CSNK1G3Q9Y6M4 AC080112.2-201ENST00000578774 2094 ntTSL 4 BASIC20.72■□□□□ 0.91
CSNK1G3Q9Y6M4 PEX10-204ENST00000507596 1941 ntAPPRIS ALT1 TSL 5 BASIC20.72■□□□□ 0.91
CSNK1G3Q9Y6M4 SMAGP-205ENST00000603864 1518 ntAPPRIS P1 TSL 2 BASIC20.72■□□□□ 0.91
CSNK1G3Q9Y6M4 WDR86-207ENST00000621812 1542 ntTSL 5 BASIC20.72■□□□□ 0.91
CSNK1G3Q9Y6M4 CACNG2-201ENST00000300105 2384 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
CSNK1G3Q9Y6M4 FASTK-212ENST00000482571 1764 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
CSNK1G3Q9Y6M4 ZNF784-201ENST00000325351 2021 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
CSNK1G3Q9Y6M4 MAGED2-206ENST00000375068 2189 ntAPPRIS P2 TSL 1 (best) BASIC20.71■□□□□ 0.91
CSNK1G3Q9Y6M4 MGST3-205ENST00000367889 1015 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
CSNK1G3Q9Y6M4 DHRS4L2-204ENST00000537912 918 ntTSL 2 BASIC20.71■□□□□ 0.91
CSNK1G3Q9Y6M4 KLF13-207ENST00000560473 489 ntTSL 3 BASIC20.71■□□□□ 0.91
CSNK1G3Q9Y6M4 DTNB-210ENST00000407186 2275 ntTSL 5 BASIC20.71■□□□□ 0.91
CSNK1G3Q9Y6M4 KLHDC9-201ENST00000368011 1314 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
CSNK1G3Q9Y6M4 MRGBP-201ENST00000370487 2781 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
CSNK1G3Q9Y6M4 HLA-DPB1-211ENST00000418931 1560 ntAPPRIS P2 BASIC20.71■□□□□ 0.91
CSNK1G3Q9Y6M4 SLC25A47-202ENST00000557052 1552 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
CSNK1G3Q9Y6M4 FHL3-201ENST00000373016 1647 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
CSNK1G3Q9Y6M4 GRTP1-203ENST00000375431 1384 ntAPPRIS P3 TSL 1 (best) BASIC20.71■□□□□ 0.91
CSNK1G3Q9Y6M4 GPR6-202ENST00000414000 1945 ntTSL 2 BASIC20.7■□□□□ 0.91
CSNK1G3Q9Y6M4 PNRC1-201ENST00000336032 2065 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
CSNK1G3Q9Y6M4 RBMS1-205ENST00000409972 1815 ntTSL 5 BASIC20.7■□□□□ 0.9
CSNK1G3Q9Y6M4 TRAPPC5-201ENST00000317378 790 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
CSNK1G3Q9Y6M4 ZNF644-203ENST00000361321 1253 ntTSL 2 BASIC20.7■□□□□ 0.9
CSNK1G3Q9Y6M4 CYP2T1P-201ENST00000432607 1285 ntBASIC20.7■□□□□ 0.9
CSNK1G3Q9Y6M4 AC008443.6-201ENST00000512508 500 ntTSL 4 BASIC20.7■□□□□ 0.9
CSNK1G3Q9Y6M4 MIR4758-201ENST00000577688 71 ntBASIC20.7■□□□□ 0.9
CSNK1G3Q9Y6M4 CIRBP-214ENST00000587896 1081 ntTSL 2 BASIC20.7■□□□□ 0.9
CSNK1G3Q9Y6M4 ABHD1-207ENST00000621324 1078 ntTSL 5 BASIC20.7■□□□□ 0.9
CSNK1G3Q9Y6M4 NPTXR-201ENST00000333039 5784 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
CSNK1G3Q9Y6M4 BST1-202ENST00000382346 1993 ntAPPRIS ALT2 TSL 5 BASIC20.7■□□□□ 0.9
CSNK1G3Q9Y6M4 AC139530.1-201ENST00000575312 1977 ntBASIC20.7■□□□□ 0.9
CSNK1G3Q9Y6M4 RWDD4-206ENST00000512740 1393 ntTSL 5 BASIC20.7■□□□□ 0.9
CSNK1G3Q9Y6M4 SLC52A2-211ENST00000532887 2147 ntAPPRIS P1 TSL 5 BASIC20.69■□□□□ 0.9
CSNK1G3Q9Y6M4 CHODL-201ENST00000299295 2548 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
CSNK1G3Q9Y6M4 AC079834.2-201ENST00000609776 1949 ntBASIC20.69■□□□□ 0.9
CSNK1G3Q9Y6M4 DONSON-210ENST00000453626 2332 ntTSL 5 BASIC20.69■□□□□ 0.9
CSNK1G3Q9Y6M4 HAUS4-201ENST00000206474 1642 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
CSNK1G3Q9Y6M4 RARRES2-201ENST00000223271 740 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
CSNK1G3Q9Y6M4 TM4SF5-201ENST00000270560 708 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
CSNK1G3Q9Y6M4 C4orf48-201ENST00000409248 433 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
CSNK1G3Q9Y6M4 AL512625.2-201ENST00000417533 625 ntBASIC20.69■□□□□ 0.9
CSNK1G3Q9Y6M4 Z92544.1-201ENST00000567091 730 ntTSL 3 BASIC20.69■□□□□ 0.9
CSNK1G3Q9Y6M4 DCTPP1-205ENST00000568973 878 ntTSL 2 BASIC20.69■□□□□ 0.9
CSNK1G3Q9Y6M4 MAGIX-202ENST00000595224 1238 ntAPPRIS P2 TSL 5 BASIC20.69■□□□□ 0.9
CSNK1G3Q9Y6M4 GPX1-204ENST00000620890 897 ntAPPRIS ALT2 TSL 5 BASIC20.69■□□□□ 0.9
CSNK1G3Q9Y6M4 ABHD6-201ENST00000295962 2393 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
CSNK1G3Q9Y6M4 SEPT5-210ENST00000455784 2070 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
CSNK1G3Q9Y6M4 UBE2E3-201ENST00000392415 1347 ntAPPRIS P1 TSL 3 BASIC20.69■□□□□ 0.9
CSNK1G3Q9Y6M4 GPIHBP1-201ENST00000622500 2282 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
CSNK1G3Q9Y6M4 ASCL2-201ENST00000331289 1852 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
CSNK1G3Q9Y6M4 SPR-201ENST00000234454 1480 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
CSNK1G3Q9Y6M4 HTATSF1-201ENST00000218364 2775 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
CSNK1G3Q9Y6M4 IKBKG-212ENST00000617207 1949 ntAPPRIS ALT1 TSL 3 BASIC20.68■□□□□ 0.9
CSNK1G3Q9Y6M4 TANGO2-202ENST00000398042 2011 ntTSL 2 BASIC20.68■□□□□ 0.9
CSNK1G3Q9Y6M4 UBE2S-201ENST00000264552 2548 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
CSNK1G3Q9Y6M4 KPTN-201ENST00000338134 1691 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
CSNK1G3Q9Y6M4 DHRS2-202ENST00000344777 1678 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
CSNK1G3Q9Y6M4 FITM1-201ENST00000267426 1194 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
CSNK1G3Q9Y6M4 UMAD1-202ENST00000463725 559 ntTSL 4 BASIC20.68■□□□□ 0.9
CSNK1G3Q9Y6M4 ZNF148-203ENST00000468369 1025 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
CSNK1G3Q9Y6M4 AC008694.1-202ENST00000636953 945 ntBASIC20.68■□□□□ 0.9
CSNK1G3Q9Y6M4 SOX18-201ENST00000340356 1864 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
CSNK1G3Q9Y6M4 RGS7-204ENST00000366565 2494 ntAPPRIS P3 TSL 1 (best) BASIC20.68■□□□□ 0.9
CSNK1G3Q9Y6M4 DENND1A-201ENST00000373618 3003 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
CSNK1G3Q9Y6M4 KRT16P2-201ENST00000414673 1423 ntBASIC20.68■□□□□ 0.9
CSNK1G3Q9Y6M4 NHLH1-201ENST00000302101 2563 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
CSNK1G3Q9Y6M4 TTC9-201ENST00000256367 5217 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
CSNK1G3Q9Y6M4 SUMF1-201ENST00000272902 2159 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
CSNK1G3Q9Y6M4 CDK5-204ENST00000485972 1758 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
CSNK1G3Q9Y6M4 TOP1MT-201ENST00000329245 1958 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
CSNK1G3Q9Y6M4 MED10-201ENST00000255764 1141 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
CSNK1G3Q9Y6M4 HIST1H2AM-201ENST00000359611 393 ntAPPRIS P1 BASIC20.67■□□□□ 0.9
CSNK1G3Q9Y6M4 WT1-204ENST00000448076 2114 ntAPPRIS ALT2 TSL 2 BASIC20.67■□□□□ 0.9
CSNK1G3Q9Y6M4 ATPIF1-203ENST00000468425 539 ntTSL 2 BASIC20.67■□□□□ 0.9
CSNK1G3Q9Y6M4 AC105001.1-201ENST00000506149 821 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
CSNK1G3Q9Y6M4 FAM47E-204ENST00000510328 1002 ntAPPRIS ALT2 TSL 2 BASIC20.67■□□□□ 0.9
CSNK1G3Q9Y6M4 CIRBP-211ENST00000586773 942 ntAPPRIS ALT1 TSL 2 BASIC20.67■□□□□ 0.9
CSNK1G3Q9Y6M4 AC069236.1-201ENST00000604339 616 ntBASIC20.67■□□□□ 0.9
CSNK1G3Q9Y6M4 SLC35A3-218ENST00000639994 1114 ntTSL 5 BASIC20.67■□□□□ 0.9
CSNK1G3Q9Y6M4 NKX2-1-201ENST00000354822 2191 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
CSNK1G3Q9Y6M4 STEAP1-201ENST00000297205 1313 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
CSNK1G3Q9Y6M4 AFDN-AS1-201ENST00000359760 2238 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
CSNK1G3Q9Y6M4 HOMER1-202ENST00000334082 5881 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
CSNK1G3Q9Y6M4 ATG101-201ENST00000336854 1439 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
CSNK1G3Q9Y6M4 SNX24-211ENST00000513881 1563 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
CSNK1G3Q9Y6M4 GGA2-211ENST00000567468 1713 ntTSL 2 BASIC20.67■□□□□ 0.9
CSNK1G3Q9Y6M4 TMEM51-203ENST00000400796 1842 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
CSNK1G3Q9Y6M4 CBWD6-213ENST00000613716 1820 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
CSNK1G3Q9Y6M4 GALC-202ENST00000393568 2054 ntTSL 2 BASIC20.66■□□□□ 0.9
CSNK1G3Q9Y6M4 BHLHA15-201ENST00000314018 706 ntAPPRIS P1 BASIC20.66■□□□□ 0.9
CSNK1G3Q9Y6M4 COA6-202ENST00000366613 641 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
CSNK1G3Q9Y6M4 HSD17B10-202ENST00000375298 823 ntTSL 3 BASIC20.66■□□□□ 0.9
CSNK1G3Q9Y6M4 AC099522.1-201ENST00000505955 881 ntTSL 3 BASIC20.66■□□□□ 0.9
CSNK1G3Q9Y6M4 LINC02199-202ENST00000510067 1008 ntTSL 2 BASIC20.66■□□□□ 0.9
CSNK1G3Q9Y6M4 SEC23A-213ENST00000557280 561 ntTSL 4 BASIC20.66■□□□□ 0.9
CSNK1G3Q9Y6M4 AL162412.1-201ENST00000567129 965 ntBASIC20.66■□□□□ 0.9
CSNK1G3Q9Y6M4 PLLP-204ENST00000569059 665 ntTSL 3 BASIC20.66■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 22.8 ms