Protein–RNA interactions for Protein: Q9Y333

LSM2, U6 snRNA-associated Sm-like protein LSm2, humanhuman

Known RBP Predictions only

Length 95 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LSM2Q9Y333 FAM120B-204ENST00000625626 1794 ntAPPRIS ALT2 TSL 2 BASIC18.81■□□□□ 0.6
LSM2Q9Y333 TPM1-208ENST00000404484 1568 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
LSM2Q9Y333 TMED4-203ENST00000457408 2322 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
LSM2Q9Y333 PTPRJ-201ENST00000418331 5122 ntAPPRIS P2 TSL 1 (best) BASIC18.8■□□□□ 0.6
LSM2Q9Y333 HSPB2-201ENST00000304298 1335 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
LSM2Q9Y333 BACE2-201ENST00000328735 2824 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
LSM2Q9Y333 RXFP3-201ENST00000330120 1852 ntAPPRIS P1 BASIC18.8■□□□□ 0.6
LSM2Q9Y333 MRFAP1-201ENST00000320912 2049 ntAPPRIS P1 TSL 2 BASIC18.8■□□□□ 0.6
LSM2Q9Y333 AL590094.1-201ENST00000635581 706 ntTSL 2 BASIC18.8■□□□□ 0.6
LSM2Q9Y333 TPM1-204ENST00000334895 1637 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
LSM2Q9Y333 POLE2-202ENST00000539565 1792 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
LSM2Q9Y333 CCSAP-201ENST00000284617 5121 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
LSM2Q9Y333 MAGI2-212ENST00000626691 4599 ntTSL 5 BASIC18.79■□□□□ 0.6
LSM2Q9Y333 CXCL16-203ENST00000574412 1668 ntAPPRIS P2 TSL 1 (best) BASIC18.79■□□□□ 0.6
LSM2Q9Y333 SYNC-201ENST00000373484 1824 ntAPPRIS ALT2 TSL 2 BASIC18.79■□□□□ 0.6
LSM2Q9Y333 GTPBP3-222ENST00000600625 2493 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
LSM2Q9Y333 WDR4-202ENST00000398208 2122 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
LSM2Q9Y333 TRIM7-202ENST00000334421 1228 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
LSM2Q9Y333 POMGNT2-201ENST00000344697 2544 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
LSM2Q9Y333 ARL6IP4-220ENST00000543566 1591 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
LSM2Q9Y333 ADAP2-204ENST00000580525 1598 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
LSM2Q9Y333 NR5A1-202ENST00000373588 3104 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
LSM2Q9Y333 ZDHHC20-203ENST00000400590 1869 ntAPPRIS ALT2 TSL 5 BASIC18.79■□□□□ 0.6
LSM2Q9Y333 UBE2F-201ENST00000272930 2009 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
LSM2Q9Y333 AC008105.1-201ENST00000587534 2003 ntTSL 2 BASIC18.79■□□□□ 0.6
LSM2Q9Y333 PQLC2-201ENST00000375153 2153 ntAPPRIS P1 TSL 2 BASIC18.79■□□□□ 0.6
LSM2Q9Y333 RASL12-201ENST00000220062 2640 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
LSM2Q9Y333 CAMK2N2-201ENST00000296238 1362 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
LSM2Q9Y333 AC133637.1-201ENST00000624115 1537 ntBASIC18.79■□□□□ 0.6
LSM2Q9Y333 MAPK9-206ENST00000425491 2266 ntTSL 5 BASIC18.79■□□□□ 0.6
LSM2Q9Y333 SUMO3-204ENST00000411651 1921 ntTSL 2 BASIC18.78■□□□□ 0.6
LSM2Q9Y333 MBD1-216ENST00000587605 1945 ntTSL 2 BASIC18.78■□□□□ 0.6
LSM2Q9Y333 AC009506.1-201ENST00000418474 1494 ntTSL 2 BASIC18.78■□□□□ 0.6
LSM2Q9Y333 WT1-210ENST00000639563 1494 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
LSM2Q9Y333 CBLN2-201ENST00000269503 2945 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
LSM2Q9Y333 TUBA4A-202ENST00000392088 2499 ntTSL 2 BASIC18.78■□□□□ 0.6
LSM2Q9Y333 SNX32-201ENST00000308342 2003 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
LSM2Q9Y333 TMEM163-201ENST00000281924 1892 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
LSM2Q9Y333 PCDHAC2-203ENST00000615316 3011 ntBASIC18.78■□□□□ 0.6
LSM2Q9Y333 NR2F1-AS1-210ENST00000606739 1431 ntTSL 2 BASIC18.78■□□□□ 0.6
LSM2Q9Y333 HOMEZ-201ENST00000357460 4971 ntAPPRIS P2 TSL 1 (best) BASIC18.78■□□□□ 0.6
LSM2Q9Y333 GUK1-208ENST00000366728 842 ntTSL 2 BASIC18.78■□□□□ 0.6
LSM2Q9Y333 IPO9-AS1-201ENST00000413035 839 ntTSL 3 BASIC18.78■□□□□ 0.6
LSM2Q9Y333 PRELID1-203ENST00000503216 1171 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
LSM2Q9Y333 AC026785.2-201ENST00000511821 867 ntTSL 2 BASIC18.78■□□□□ 0.6
LSM2Q9Y333 Z92544.1-202ENST00000571933 1220 ntBASIC18.78■□□□□ 0.6
LSM2Q9Y333 C16orf95-206ENST00000618367 974 ntAPPRIS ALT2 TSL 2 BASIC18.78■□□□□ 0.6
LSM2Q9Y333 TPST2-202ENST00000398110 1968 ntAPPRIS P1 TSL 2 BASIC18.78■□□□□ 0.6
LSM2Q9Y333 NRXN1-226ENST00000626899 2543 ntTSL 2 BASIC18.78■□□□□ 0.6
LSM2Q9Y333 SRSF4-201ENST00000373795 2387 ntAPPRIS P2 TSL 1 (best) BASIC18.78■□□□□ 0.6
LSM2Q9Y333 PDLIM3-212ENST00000620787 2352 ntTSL 4 BASIC18.78■□□□□ 0.6
LSM2Q9Y333 ST3GAL5-222ENST00000638572 4431 ntAPPRIS P2 TSL 1 (best) BASIC18.78■□□□□ 0.6
LSM2Q9Y333 HMOX2-218ENST00000619913 1908 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
LSM2Q9Y333 RBM45-207ENST00000616198 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC18.78■□□□□ 0.6
LSM2Q9Y333 PAN3-201ENST00000380958 2833 ntAPPRIS P2 TSL 5 BASIC18.78■□□□□ 0.6
LSM2Q9Y333 PAX1-202ENST00000444366 1850 ntAPPRIS ALT2 TSL 2 BASIC18.77■□□□□ 0.6
LSM2Q9Y333 SLC39A4-201ENST00000276833 2297 ntTSL 2 BASIC18.77■□□□□ 0.6
LSM2Q9Y333 CELF2-213ENST00000633077 1733 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
LSM2Q9Y333 SOCS2-201ENST00000340600 2761 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
LSM2Q9Y333 TRIM15-210ENST00000619857 2217 ntTSL 5 BASIC18.77■□□□□ 0.6
LSM2Q9Y333 FXYD3-201ENST00000344013 1404 ntTSL 5 BASIC18.77■□□□□ 0.6
LSM2Q9Y333 AR-204ENST00000504326 3615 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
LSM2Q9Y333 ERI3-201ENST00000372257 1684 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
LSM2Q9Y333 OSCAR-206ENST00000391760 629 ntTSL 2 BASIC18.77■□□□□ 0.6
LSM2Q9Y333 ILDR2-208ENST00000529387 1238 ntTSL 5 BASIC18.77■□□□□ 0.6
LSM2Q9Y333 SNX5-219ENST00000606602 885 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
LSM2Q9Y333 VKORC1L1-202ENST00000434382 1541 ntTSL 2 BASIC18.77■□□□□ 0.6
LSM2Q9Y333 AL121749.1-201ENST00000635993 1768 ntTSL 5 BASIC18.77■□□□□ 0.6
LSM2Q9Y333 HNRNPAB-201ENST00000355836 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
LSM2Q9Y333 SLC43A3-225ENST00000533524 1879 ntAPPRIS ALT2 TSL 2 BASIC18.77■□□□□ 0.6
LSM2Q9Y333 EYA2-210ENST00000611592 2612 ntTSL 5 BASIC18.77■□□□□ 0.6
LSM2Q9Y333 MAP3K14-AS1-203ENST00000585780 2475 ntTSL 2 BASIC18.77■□□□□ 0.59
LSM2Q9Y333 UBTD2-201ENST00000393792 3301 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
LSM2Q9Y333 NFKBIL1-203ENST00000376148 1478 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
LSM2Q9Y333 PRR20B-201ENST00000377930 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
LSM2Q9Y333 PRR20A-201ENST00000377931 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
LSM2Q9Y333 PRR20E-201ENST00000434815 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
LSM2Q9Y333 PRR20D-201ENST00000452123 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
LSM2Q9Y333 PRR20C-201ENST00000544357 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
LSM2Q9Y333 PRR20C-202ENST00000614894 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
LSM2Q9Y333 C14orf79-207ENST00000550614 1912 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
LSM2Q9Y333 CTU2-210ENST00000567949 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
LSM2Q9Y333 BRD4-202ENST00000360016 3240 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
LSM2Q9Y333 NAB2-201ENST00000300131 2711 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
LSM2Q9Y333 ARSB-201ENST00000264914 5327 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
LSM2Q9Y333 COPS7A-222ENST00000626119 1768 ntTSL 3 BASIC18.76■□□□□ 0.59
LSM2Q9Y333 KANK4-202ENST00000354381 2103 ntTSL 2 BASIC18.76■□□□□ 0.59
LSM2Q9Y333 CHD1L-201ENST00000361293 2484 ntTSL 2 BASIC18.76■□□□□ 0.59
LSM2Q9Y333 PGAM5-203ENST00000498926 2834 ntAPPRIS P1 TSL 2 BASIC18.76■□□□□ 0.59
LSM2Q9Y333 CDO1-201ENST00000250535 1860 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
LSM2Q9Y333 SOX8-201ENST00000293894 3049 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
LSM2Q9Y333 ZFAND5-202ENST00000343431 1073 ntAPPRIS P1 TSL 5 BASIC18.76■□□□□ 0.59
LSM2Q9Y333 PTRH1-208ENST00000543175 814 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
LSM2Q9Y333 AP003356.1-202ENST00000517910 2770 ntTSL 2 BASIC18.76■□□□□ 0.59
LSM2Q9Y333 AC009041.2-204ENST00000568394 3343 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
LSM2Q9Y333 NGEF-202ENST00000373552 2286 ntAPPRIS P1 TSL 2 BASIC18.76■□□□□ 0.59
LSM2Q9Y333 GRB14-201ENST00000263915 2382 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
LSM2Q9Y333 FGF14-IT1-202ENST00000607251 2123 ntTSL 2 BASIC18.76■□□□□ 0.59
LSM2Q9Y333 NKX2-1-202ENST00000498187 2338 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
LSM2Q9Y333 CLN8-213ENST00000637156 1897 ntAPPRIS P1 TSL 5 BASIC18.75■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 23.4 ms