Protein–RNA interactions for Protein: Q9NSU2

TREX1, Three-prime repair exonuclease 1, humanhuman

Predictions only

Length 369 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TREX1Q9NSU2 DCTN3-205ENST00000378916 773 ntTSL 2 BASIC21.15■□□□□ 0.98
TREX1Q9NSU2 FAIM-203ENST00000393034 927 ntAPPRIS P3 TSL 2 BASIC21.15■□□□□ 0.98
TREX1Q9NSU2 AC105265.2-201ENST00000467189 838 ntBASIC21.15■□□□□ 0.98
TREX1Q9NSU2 SLC39A3-203ENST00000545664 1219 ntTSL 2 BASIC21.15■□□□□ 0.98
TREX1Q9NSU2 AC127029.2-201ENST00000577329 502 ntTSL 3 BASIC21.15■□□□□ 0.98
TREX1Q9NSU2 FIP1L1-201ENST00000306932 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC21.15■□□□□ 0.98
TREX1Q9NSU2 TMEM17-201ENST00000335390 1797 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
TREX1Q9NSU2 ORAI3-201ENST00000318663 2206 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
TREX1Q9NSU2 CEBPE-201ENST00000206513 1554 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
TREX1Q9NSU2 TMEM129-206ENST00000536901 2172 ntAPPRIS P1 TSL 5 BASIC21.14■□□□□ 0.98
TREX1Q9NSU2 HSD11B1L-201ENST00000301382 1457 ntTSL 1 (best) BASIC21.14■□□□□ 0.98
TREX1Q9NSU2 DMRT2-203ENST00000358146 1965 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
TREX1Q9NSU2 EPHX3-201ENST00000221730 1822 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
TREX1Q9NSU2 HBM-201ENST00000356815 506 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
TREX1Q9NSU2 C16orf72-201ENST00000327827 5953 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
TREX1Q9NSU2 FOXP4-203ENST00000373060 5948 ntTSL 5 BASIC21.14■□□□□ 0.97
TREX1Q9NSU2 FOXP4-204ENST00000373063 5910 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
TREX1Q9NSU2 RASL12-202ENST00000421977 1523 ntTSL 2 BASIC21.14■□□□□ 0.97
TREX1Q9NSU2 VKORC1L1-202ENST00000434382 1541 ntTSL 2 BASIC21.14■□□□□ 0.97
TREX1Q9NSU2 CCNYL1-202ENST00000339882 2619 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
TREX1Q9NSU2 FNDC11-204ENST00000615526 2954 ntAPPRIS P1 BASIC21.13■□□□□ 0.97
TREX1Q9NSU2 EIPR1-206ENST00000443925 1771 ntTSL 3 BASIC21.13■□□□□ 0.97
TREX1Q9NSU2 ZNF622-201ENST00000308683 1699 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
TREX1Q9NSU2 EEF1D-204ENST00000423316 2378 ntAPPRIS P4 TSL 5 BASIC21.13■□□□□ 0.97
TREX1Q9NSU2 NT5C3AP1-201ENST00000394500 1012 ntBASIC21.13■□□□□ 0.97
TREX1Q9NSU2 PARD6B-202ENST00000396039 522 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
TREX1Q9NSU2 PRKCQ-AS1-202ENST00000445427 1133 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
TREX1Q9NSU2 HERC2P4-206ENST00000568097 1062 ntTSL 5 BASIC21.13■□□□□ 0.97
TREX1Q9NSU2 NAE1-203ENST00000379463 1909 ntTSL 2 BASIC21.13■□□□□ 0.97
TREX1Q9NSU2 TPM1-208ENST00000404484 1568 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
TREX1Q9NSU2 ASCL2-201ENST00000331289 1852 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
TREX1Q9NSU2 TEAD2-208ENST00000598810 2191 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
TREX1Q9NSU2 SOX3-201ENST00000370536 2132 ntAPPRIS P1 BASIC21.13■□□□□ 0.97
TREX1Q9NSU2 AL049796.1-201ENST00000565336 1766 ntBASIC21.13■□□□□ 0.97
TREX1Q9NSU2 NABP2-202ENST00000341463 1411 ntAPPRIS P1 TSL 3 BASIC21.12■□□□□ 0.97
TREX1Q9NSU2 RAB1A-202ENST00000409751 1333 ntTSL 5 BASIC21.12■□□□□ 0.97
TREX1Q9NSU2 ACADVL-202ENST00000350303 2191 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
TREX1Q9NSU2 IRS3P-201ENST00000223076 1006 ntBASIC21.12■□□□□ 0.97
TREX1Q9NSU2 EIF6-201ENST00000374436 1252 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
TREX1Q9NSU2 TPT1-AS1-211ENST00000520622 604 ntTSL 4 BASIC21.12■□□□□ 0.97
TREX1Q9NSU2 AC010999.2-201ENST00000621974 596 ntTSL 2 BASIC21.12■□□□□ 0.97
TREX1Q9NSU2 MIR6084-201ENST00000622012 110 ntBASIC21.12■□□□□ 0.97
TREX1Q9NSU2 CPT2-209ENST00000636935 803 ntTSL 5 BASIC21.12■□□□□ 0.97
TREX1Q9NSU2 MAF1-205ENST00000534585 1754 ntTSL 5 BASIC21.12■□□□□ 0.97
TREX1Q9NSU2 AP004608.1-201ENST00000531319 1402 ntTSL 2 BASIC21.12■□□□□ 0.97
TREX1Q9NSU2 ALKAL2-204ENST00000403610 1389 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
TREX1Q9NSU2 FNDC10-201ENST00000422725 2085 ntAPPRIS P1 BASIC21.11■□□□□ 0.97
TREX1Q9NSU2 MOSPD3-202ENST00000379527 1016 ntAPPRIS P1 TSL 5 BASIC21.11■□□□□ 0.97
TREX1Q9NSU2 LTC4S-202ENST00000401985 486 ntTSL 3 BASIC21.11■□□□□ 0.97
TREX1Q9NSU2 MTURN-203ENST00000409688 843 ntTSL 2 BASIC21.11■□□□□ 0.97
TREX1Q9NSU2 TUNAR-203ENST00000554321 767 ntAPPRIS P1 TSL 4 BASIC21.11■□□□□ 0.97
TREX1Q9NSU2 MRM1-203ENST00000612760 1284 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
TREX1Q9NSU2 RSPO1-201ENST00000356545 2621 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
TREX1Q9NSU2 CCDC88B-203ENST00000359902 2326 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
TREX1Q9NSU2 NOC4L-201ENST00000330579 1632 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
TREX1Q9NSU2 NGLY1-204ENST00000396649 2024 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
TREX1Q9NSU2 CSNK1G3-206ENST00000511130 1356 ntTSL 2 BASIC21.1■□□□□ 0.97
TREX1Q9NSU2 SLC25A27-202ENST00000411689 2526 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
TREX1Q9NSU2 TUBA1A-201ENST00000295766 1887 ntAPPRIS P1 TSL 2 BASIC21.1■□□□□ 0.97
TREX1Q9NSU2 NME4-201ENST00000219479 995 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
TREX1Q9NSU2 NME4-202ENST00000382940 766 ntTSL 3 BASIC21.1■□□□□ 0.97
TREX1Q9NSU2 AC092675.2-201ENST00000413274 541 ntTSL 4 BASIC21.1■□□□□ 0.97
TREX1Q9NSU2 RNF146-206ENST00000480444 843 ntTSL 2 BASIC21.1■□□□□ 0.97
TREX1Q9NSU2 EEF1DP3-203ENST00000566025 782 ntBASIC21.1■□□□□ 0.97
TREX1Q9NSU2 NME4-211ENST00000620944 1193 ntTSL 2 BASIC21.1■□□□□ 0.97
TREX1Q9NSU2 RARG-204ENST00000543726 1779 ntTSL 2 BASIC21.1■□□□□ 0.97
TREX1Q9NSU2 ARL6IP4-220ENST00000543566 1591 ntAPPRIS ALT2 TSL 1 (best) BASIC21.1■□□□□ 0.97
TREX1Q9NSU2 ITGB1BP1-203ENST00000359712 2126 ntTSL 2 BASIC21.1■□□□□ 0.97
TREX1Q9NSU2 JPT1-206ENST00000476258 2289 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
TREX1Q9NSU2 TM7SF2-201ENST00000279263 1722 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
TREX1Q9NSU2 UBE2I-205ENST00000402301 1708 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
TREX1Q9NSU2 SEPT5-210ENST00000455784 2070 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
TREX1Q9NSU2 ILKAP-211ENST00000612675 1335 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
TREX1Q9NSU2 CLPSL2-201ENST00000360454 488 ntAPPRIS ALT2 TSL 1 (best) BASIC21.09■□□□□ 0.97
TREX1Q9NSU2 TSPY4-201ENST00000383008 1143 ntAPPRIS ALT2 TSL 5 BASIC21.09■□□□□ 0.97
TREX1Q9NSU2 GLI4-210ENST00000523522 1297 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
TREX1Q9NSU2 TMEM179B-205ENST00000533861 797 ntTSL 5 BASIC21.09■□□□□ 0.97
TREX1Q9NSU2 AES-207ENST00000586839 942 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
TREX1Q9NSU2 PALM-207ENST00000590161 2137 ntTSL 4 BASIC21.09■□□□□ 0.97
TREX1Q9NSU2 AC007128.1-201ENST00000424460 1853 ntTSL 5 BASIC21.09■□□□□ 0.97
TREX1Q9NSU2 MEIS2-207ENST00000557796 2666 ntTSL 5 BASIC21.09■□□□□ 0.97
TREX1Q9NSU2 MFF-207ENST00000409565 1548 ntTSL 2 BASIC21.09■□□□□ 0.97
TREX1Q9NSU2 VPS29-206ENST00000549578 1523 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
TREX1Q9NSU2 RAB11FIP3-201ENST00000262305 4831 ntAPPRIS P2 TSL 1 (best) BASIC21.08■□□□□ 0.97
TREX1Q9NSU2 DBX2-201ENST00000332700 2806 ntAPPRIS P1 TSL 2 BASIC21.08■□□□□ 0.97
TREX1Q9NSU2 UNC93B1-201ENST00000227471 2316 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
TREX1Q9NSU2 AC027612.3-201ENST00000413684 1047 ntBASIC21.08■□□□□ 0.97
TREX1Q9NSU2 CHTF8-210ENST00000523421 766 ntTSL 3 BASIC21.08■□□□□ 0.97
TREX1Q9NSU2 PAQR6-213ENST00000612424 2037 ntTSL 2 BASIC21.08■□□□□ 0.97
TREX1Q9NSU2 TTC9-201ENST00000256367 5217 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
TREX1Q9NSU2 TMEM206-205ENST00000535273 2119 ntTSL 2 BASIC21.08■□□□□ 0.96
TREX1Q9NSU2 UCK2-201ENST00000367879 1375 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
TREX1Q9NSU2 SGTA-201ENST00000221566 2330 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
TREX1Q9NSU2 HAND1-201ENST00000231121 1738 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
TREX1Q9NSU2 AC243965.2-201ENST00000612576 2671 ntTSL 5 BASIC21.07■□□□□ 0.96
TREX1Q9NSU2 AC138649.1-201ENST00000619611 1449 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
TREX1Q9NSU2 MRAS-202ENST00000423968 1803 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
TREX1Q9NSU2 HHIPL1-202ENST00000357223 2241 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
TREX1Q9NSU2 PPCS-202ENST00000372560 793 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
TREX1Q9NSU2 AC053503.5-201ENST00000601508 636 ntBASIC21.07■□□□□ 0.96
Retrieved 100 of 98,524 protein–RNA pairs in 28.4 ms