Protein–RNA interactions for Protein: Q9HBV1

POPDC3, Popeye domain-containing protein 3, humanhuman

Predictions only

Length 291 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POPDC3Q9HBV1 SKI-201ENST00000378536 5613 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
POPDC3Q9HBV1 C11orf91-201ENST00000379011 811 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
POPDC3Q9HBV1 RORB-AS1-201ENST00000417576 1178 ntTSL 5 BASIC20.81■□□□□ 0.92
POPDC3Q9HBV1 SUDS3P1-201ENST00000505831 966 ntBASIC20.81■□□□□ 0.92
POPDC3Q9HBV1 AC012414.1-201ENST00000556676 535 ntBASIC20.81■□□□□ 0.92
POPDC3Q9HBV1 AC006538.2-201ENST00000586572 543 ntAPPRIS P1 TSL 4 BASIC20.81■□□□□ 0.92
POPDC3Q9HBV1 PRMT1-221ENST00000610806 1192 ntTSL 3 BASIC20.81■□□□□ 0.92
POPDC3Q9HBV1 GPSM1-206ENST00000616132 2270 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
POPDC3Q9HBV1 SLC25A27-202ENST00000411689 2526 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
POPDC3Q9HBV1 VPS13B-204ENST00000441350 1626 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
POPDC3Q9HBV1 KCNH6-203ENST00000580652 1703 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
POPDC3Q9HBV1 MAPK8IP1P2-201ENST00000580257 1472 ntBASIC20.81■□□□□ 0.92
POPDC3Q9HBV1 MXRA7-201ENST00000355797 5661 ntAPPRIS P4 TSL 2 BASIC20.8■□□□□ 0.92
POPDC3Q9HBV1 MPST-204ENST00000404393 1329 ntTSL 5 BASIC20.8■□□□□ 0.92
POPDC3Q9HBV1 NUDT10-201ENST00000356450 1917 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
POPDC3Q9HBV1 CCNYL1-202ENST00000339882 2619 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
POPDC3Q9HBV1 PAQR6-213ENST00000612424 2037 ntTSL 2 BASIC20.8■□□□□ 0.92
POPDC3Q9HBV1 EIPR1-206ENST00000443925 1771 ntTSL 3 BASIC20.8■□□□□ 0.92
POPDC3Q9HBV1 TMEM206-205ENST00000535273 2119 ntTSL 2 BASIC20.8■□□□□ 0.92
POPDC3Q9HBV1 ADRM1-204ENST00000491935 1530 ntAPPRIS P1 TSL 5 BASIC20.8■□□□□ 0.92
POPDC3Q9HBV1 TMEM151B-202ENST00000451188 4895 ntAPPRIS P2 TSL 5 BASIC20.8■□□□□ 0.92
POPDC3Q9HBV1 LAMTOR1-201ENST00000278671 1179 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
POPDC3Q9HBV1 CDC37L1-202ENST00000381858 1244 ntTSL 5 BASIC20.8■□□□□ 0.92
POPDC3Q9HBV1 LINC01574-201ENST00000512115 560 ntTSL 2 BASIC20.8■□□□□ 0.92
POPDC3Q9HBV1 LRRC75A-203ENST00000470794 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
POPDC3Q9HBV1 AC007128.1-201ENST00000424460 1853 ntTSL 5 BASIC20.79■□□□□ 0.92
POPDC3Q9HBV1 CENPU-201ENST00000281453 1998 ntAPPRIS P2 TSL 1 (best) BASIC20.79■□□□□ 0.92
POPDC3Q9HBV1 RNF38-205ENST00000377877 1974 ntTSL 2 BASIC20.79■□□□□ 0.92
POPDC3Q9HBV1 ECHDC2-221ENST00000536120 1446 ntTSL 3 BASIC20.79■□□□□ 0.92
POPDC3Q9HBV1 PML-217ENST00000567543 1404 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
POPDC3Q9HBV1 RSPO1-201ENST00000356545 2621 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
POPDC3Q9HBV1 NEURL4-202ENST00000399464 5200 ntAPPRIS P4 TSL 1 (best) BASIC20.79■□□□□ 0.92
POPDC3Q9HBV1 HTRA3-202ENST00000382512 2023 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
POPDC3Q9HBV1 POLR2H-204ENST00000438240 994 ntTSL 3 BASIC20.79■□□□□ 0.92
POPDC3Q9HBV1 PTGDR-202ENST00000553372 1216 ntTSL 3 BASIC20.79■□□□□ 0.92
POPDC3Q9HBV1 AL139246.5-201ENST00000606645 996 ntBASIC20.79■□□□□ 0.92
POPDC3Q9HBV1 MTX2-201ENST00000249442 1364 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
POPDC3Q9HBV1 LRP5-201ENST00000294304 5159 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
POPDC3Q9HBV1 HMCES-203ENST00000417226 1490 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
POPDC3Q9HBV1 ARSA-205ENST00000453344 1650 ntTSL 2 BASIC20.79■□□□□ 0.92
POPDC3Q9HBV1 PCED1A-202ENST00000360652 2016 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
POPDC3Q9HBV1 C10orf55-202ENST00000412307 2360 ntAPPRIS P1 TSL 5 BASIC20.78■□□□□ 0.92
POPDC3Q9HBV1 TBR1-202ENST00000410035 1454 ntTSL 2 BASIC20.78■□□□□ 0.92
POPDC3Q9HBV1 ZDHHC7-203ENST00000564466 1488 ntTSL 5 BASIC20.78■□□□□ 0.92
POPDC3Q9HBV1 PRDX4-202ENST00000379341 1005 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
POPDC3Q9HBV1 STOML2-202ENST00000452248 1296 ntTSL 2 BASIC20.78■□□□□ 0.92
POPDC3Q9HBV1 TPT1-AS1-211ENST00000520622 604 ntTSL 4 BASIC20.78■□□□□ 0.92
POPDC3Q9HBV1 AC010203.1-202ENST00000550096 695 ntTSL 3 BASIC20.78■□□□□ 0.92
POPDC3Q9HBV1 AC009097.2-201ENST00000562763 465 ntTSL 2 BASIC20.78■□□□□ 0.92
POPDC3Q9HBV1 STOML2-205ENST00000619795 1293 ntTSL 3 BASIC20.78■□□□□ 0.92
POPDC3Q9HBV1 WWTR1-AS1-202ENST00000479752 1700 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
POPDC3Q9HBV1 STRADB-201ENST00000194530 2293 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
POPDC3Q9HBV1 KCNQ1-202ENST00000335475 2159 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
POPDC3Q9HBV1 FNDC10-201ENST00000422725 2085 ntAPPRIS P1 BASIC20.77■□□□□ 0.92
POPDC3Q9HBV1 FAM3A-208ENST00000419205 1763 ntTSL 2 BASIC20.77■□□□□ 0.92
POPDC3Q9HBV1 KBTBD13-201ENST00000432196 1377 ntAPPRIS P1 BASIC20.77■□□□□ 0.92
POPDC3Q9HBV1 C16orf95-201ENST00000253461 953 ntAPPRIS P3 TSL 1 (best) BASIC20.77■□□□□ 0.92
POPDC3Q9HBV1 VGLL4-208ENST00000424529 1025 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
POPDC3Q9HBV1 TMEM179B-205ENST00000533861 797 ntTSL 5 BASIC20.77■□□□□ 0.92
POPDC3Q9HBV1 AL354811.1-201ENST00000610286 706 ntBASIC20.77■□□□□ 0.92
POPDC3Q9HBV1 TRIM3-214ENST00000536344 2704 ntTSL 2 BASIC20.77■□□□□ 0.92
POPDC3Q9HBV1 ANKLE2-201ENST00000357997 4646 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
POPDC3Q9HBV1 BCL11B-203ENST00000443726 2599 ntAPPRIS ALT2 TSL 5 BASIC20.77■□□□□ 0.91
POPDC3Q9HBV1 DHRS2-202ENST00000344777 1678 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.91
POPDC3Q9HBV1 E4F1-206ENST00000565090 2028 ntTSL 1 (best) BASIC20.77■□□□□ 0.91
POPDC3Q9HBV1 ANKRD28-201ENST00000399451 6564 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
POPDC3Q9HBV1 HAND1-201ENST00000231121 1738 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
POPDC3Q9HBV1 TM7SF2-201ENST00000279263 1722 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
POPDC3Q9HBV1 HHIPL1-202ENST00000357223 2241 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
POPDC3Q9HBV1 DCTN3-202ENST00000341694 899 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
POPDC3Q9HBV1 DCTN3-205ENST00000378916 773 ntTSL 2 BASIC20.76■□□□□ 0.91
POPDC3Q9HBV1 AC127029.2-201ENST00000577329 502 ntTSL 3 BASIC20.76■□□□□ 0.91
POPDC3Q9HBV1 EPN1-201ENST00000085079 2355 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
POPDC3Q9HBV1 YBX1-201ENST00000321358 1514 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
POPDC3Q9HBV1 HNRNPLL-204ENST00000409328 1908 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
POPDC3Q9HBV1 FNDC11-204ENST00000615526 2954 ntAPPRIS P1 BASIC20.76■□□□□ 0.91
POPDC3Q9HBV1 ZNF331-202ENST00000411977 2248 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
POPDC3Q9HBV1 AL606970.3-201ENST00000446811 2246 ntTSL 2 BASIC20.76■□□□□ 0.91
POPDC3Q9HBV1 D2HGDH-201ENST00000321264 2617 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
POPDC3Q9HBV1 ASCL2-201ENST00000331289 1852 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
POPDC3Q9HBV1 JPT1-206ENST00000476258 2289 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
POPDC3Q9HBV1 RAB24-202ENST00000303270 1385 ntTSL 2 BASIC20.75■□□□□ 0.91
POPDC3Q9HBV1 BID-215ENST00000622694 2199 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
POPDC3Q9HBV1 CERS1-205ENST00000623927 2558 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
POPDC3Q9HBV1 SGTA-201ENST00000221566 2330 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
POPDC3Q9HBV1 UNC93B1-201ENST00000227471 2316 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
POPDC3Q9HBV1 RAP2C-202ENST00000370874 2333 ntAPPRIS P1 TSL 2 BASIC20.75■□□□□ 0.91
POPDC3Q9HBV1 C1QL1-201ENST00000253407 1295 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
POPDC3Q9HBV1 FXYD7-201ENST00000270310 712 ntAPPRIS P2 TSL 1 (best) BASIC20.75■□□□□ 0.91
POPDC3Q9HBV1 AL355877.1-204ENST00000451482 1078 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
POPDC3Q9HBV1 RNF146-206ENST00000480444 843 ntTSL 2 BASIC20.75■□□□□ 0.91
POPDC3Q9HBV1 DNAAF4-201ENST00000321149 1993 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
POPDC3Q9HBV1 HFE2-202ENST00000357836 2123 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
POPDC3Q9HBV1 MEIS2-207ENST00000557796 2666 ntTSL 5 BASIC20.75■□□□□ 0.91
POPDC3Q9HBV1 UBE2I-205ENST00000402301 1708 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
POPDC3Q9HBV1 RAB1A-202ENST00000409751 1333 ntTSL 5 BASIC20.75■□□□□ 0.91
POPDC3Q9HBV1 CCDC107-205ENST00000421582 1324 ntAPPRIS ALT2 TSL 2 BASIC20.75■□□□□ 0.91
POPDC3Q9HBV1 LINC00454-202ENST00000430978 1327 ntTSL 5 BASIC20.75■□□□□ 0.91
POPDC3Q9HBV1 LINC00682-201ENST00000498940 1625 ntTSL 3 BASIC20.75■□□□□ 0.91
POPDC3Q9HBV1 DBX2-201ENST00000332700 2806 ntAPPRIS P1 TSL 2 BASIC20.74■□□□□ 0.91
Retrieved 100 of 98,524 protein–RNA pairs in 49.9 ms