Protein–RNA interactions for Protein: Q9HBG4

ATP6V0A4, V-type proton ATPase 116 kDa subunit a isoform 4, humanhuman

Predictions only

Length 840 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP6V0A4Q9HBG4 SCN1B-203ENST00000595652 814 ntTSL 2 BASIC23.54■■□□□ 1.36
ATP6V0A4Q9HBG4 NARF-202ENST00000345415 1487 ntTSL 1 (best) BASIC23.54■■□□□ 1.36
ATP6V0A4Q9HBG4 TMEM259-202ENST00000356663 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC23.53■■□□□ 1.36
ATP6V0A4Q9HBG4 SEPT5-210ENST00000455784 2070 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
ATP6V0A4Q9HBG4 AL117328.2-201ENST00000624617 1940 ntBASIC23.53■■□□□ 1.36
ATP6V0A4Q9HBG4 SLC41A3-201ENST00000315891 1797 ntTSL 1 (best) BASIC23.53■■□□□ 1.36
ATP6V0A4Q9HBG4 CHODL-201ENST00000299295 2548 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
ATP6V0A4Q9HBG4 SLC22A15-201ENST00000369502 1230 ntTSL 2 BASIC23.53■■□□□ 1.36
ATP6V0A4Q9HBG4 PPP1R14BP3-201ENST00000509033 445 ntBASIC23.53■■□□□ 1.36
ATP6V0A4Q9HBG4 LINC01901-201ENST00000585822 1115 ntTSL 1 (best) BASIC23.53■■□□□ 1.36
ATP6V0A4Q9HBG4 AC011767.1-201ENST00000617410 1153 ntBASIC23.53■■□□□ 1.36
ATP6V0A4Q9HBG4 ASCL2-201ENST00000331289 1852 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
ATP6V0A4Q9HBG4 PACRGL-208ENST00000503585 1582 ntAPPRIS P1 TSL 2 BASIC23.52■■□□□ 1.36
ATP6V0A4Q9HBG4 NAA35-202ENST00000376040 1797 ntTSL 2 BASIC23.52■■□□□ 1.36
ATP6V0A4Q9HBG4 LSR-203ENST00000360798 1963 ntTSL 2 BASIC23.52■■□□□ 1.36
ATP6V0A4Q9HBG4 GCH1-202ENST00000395514 1977 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
ATP6V0A4Q9HBG4 SLC35D3-201ENST00000331858 2359 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
ATP6V0A4Q9HBG4 ZSWIM7-201ENST00000399277 2008 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
ATP6V0A4Q9HBG4 CDKN1C-204ENST00000440480 1811 ntAPPRIS ALT2 TSL 1 (best) BASIC23.52■■□□□ 1.36
ATP6V0A4Q9HBG4 HSD11B1L-201ENST00000301382 1457 ntTSL 1 (best) BASIC23.52■■□□□ 1.36
ATP6V0A4Q9HBG4 C3orf18-205ENST00000441239 1490 ntTSL 1 (best) BASIC23.52■■□□□ 1.36
ATP6V0A4Q9HBG4 AC110285.4-201ENST00000572590 424 ntTSL 3 BASIC23.52■■□□□ 1.36
ATP6V0A4Q9HBG4 AC005410.1-201ENST00000579522 462 ntTSL 3 BASIC23.52■■□□□ 1.36
ATP6V0A4Q9HBG4 YBX1-201ENST00000321358 1514 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
ATP6V0A4Q9HBG4 ALKBH7-201ENST00000245812 1332 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
ATP6V0A4Q9HBG4 RBBP7-202ENST00000380084 2036 ntTSL 2 BASIC23.52■■□□□ 1.36
ATP6V0A4Q9HBG4 RHBDD2-201ENST00000006777 1802 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
ATP6V0A4Q9HBG4 UBE2S-201ENST00000264552 2548 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.35
ATP6V0A4Q9HBG4 NPAS1-202ENST00000449844 2043 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
ATP6V0A4Q9HBG4 MFSD3-201ENST00000301327 1548 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
ATP6V0A4Q9HBG4 EFNA2-201ENST00000215368 949 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
ATP6V0A4Q9HBG4 XBP1-202ENST00000344347 1131 ntTSL 5 BASIC23.51■■□□□ 1.35
ATP6V0A4Q9HBG4 EFCAB6-202ENST00000356087 1129 ntTSL 5 BASIC23.51■■□□□ 1.35
ATP6V0A4Q9HBG4 MLLT10-204ENST00000377091 905 ntTSL 1 (best) BASIC23.51■■□□□ 1.35
ATP6V0A4Q9HBG4 CDKN3-204ENST00000442975 727 ntTSL 1 (best) BASIC23.51■■□□□ 1.35
ATP6V0A4Q9HBG4 AC006970.2-201ENST00000450065 779 ntBASIC23.51■■□□□ 1.35
ATP6V0A4Q9HBG4 ZNF717-203ENST00000477374 1169 ntTSL 2 BASIC23.51■■□□□ 1.35
ATP6V0A4Q9HBG4 RNF146-206ENST00000480444 843 ntTSL 2 BASIC23.51■■□□□ 1.35
ATP6V0A4Q9HBG4 AL731577.2-201ENST00000508096 555 ntTSL 2 BASIC23.51■■□□□ 1.35
ATP6V0A4Q9HBG4 AC092143.4-201ENST00000570217 559 ntTSL 4 BASIC23.51■■□□□ 1.35
ATP6V0A4Q9HBG4 AC012313.6-201ENST00000599889 790 ntTSL 3 BASIC23.51■■□□□ 1.35
ATP6V0A4Q9HBG4 MRPL37-206ENST00000605337 1582 ntTSL 5 BASIC23.51■■□□□ 1.35
ATP6V0A4Q9HBG4 NRSN1-204ENST00000378491 2354 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
ATP6V0A4Q9HBG4 SLC30A2-201ENST00000374276 2494 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
ATP6V0A4Q9HBG4 AC010542.4-201ENST00000563151 1910 ntBASIC23.51■■□□□ 1.35
ATP6V0A4Q9HBG4 C16orf59-201ENST00000361837 1662 ntAPPRIS P2 TSL 1 (best) BASIC23.51■■□□□ 1.35
ATP6V0A4Q9HBG4 FAHD1-202ENST00000382668 1845 ntTSL 1 (best) BASIC23.5■■□□□ 1.35
ATP6V0A4Q9HBG4 HRASLS5-201ENST00000301790 1166 ntAPPRIS P3 TSL 1 (best) BASIC23.5■■□□□ 1.35
ATP6V0A4Q9HBG4 MRPL37-201ENST00000336230 1179 ntTSL 1 (best) BASIC23.5■■□□□ 1.35
ATP6V0A4Q9HBG4 TSPAN11-202ENST00000535215 988 ntTSL 2 BASIC23.5■■□□□ 1.35
ATP6V0A4Q9HBG4 SLC25A29-212ENST00000555927 960 ntTSL 2 BASIC23.5■■□□□ 1.35
ATP6V0A4Q9HBG4 AC106820.5-201ENST00000566085 789 ntTSL 3 BASIC23.5■■□□□ 1.35
ATP6V0A4Q9HBG4 SPN-202ENST00000395389 1935 ntAPPRIS P2 TSL 1 (best) BASIC23.5■■□□□ 1.35
ATP6V0A4Q9HBG4 RNF39-202ENST00000376751 1970 ntTSL 1 (best) BASIC23.5■■□□□ 1.35
ATP6V0A4Q9HBG4 CNIH2-201ENST00000311445 1356 ntAPPRIS P2 TSL 1 (best) BASIC23.5■■□□□ 1.35
ATP6V0A4Q9HBG4 PHACTR2-208ENST00000440869 2569 ntAPPRIS ALT2 TSL 2 BASIC23.49■■□□□ 1.35
ATP6V0A4Q9HBG4 GCH1-206ENST00000543643 1897 ntTSL 1 (best) BASIC23.49■■□□□ 1.35
ATP6V0A4Q9HBG4 LY6K-201ENST00000292430 2671 ntAPPRIS P3 TSL 1 (best) BASIC23.49■■□□□ 1.35
ATP6V0A4Q9HBG4 ADGRB1-202ENST00000517894 6241 ntAPPRIS P1 TSL 5 BASIC23.49■■□□□ 1.35
ATP6V0A4Q9HBG4 DCXR-201ENST00000306869 887 ntAPPRIS P1 TSL 1 (best) BASIC23.49■■□□□ 1.35
ATP6V0A4Q9HBG4 TMEM179B-205ENST00000533861 797 ntTSL 5 BASIC23.49■■□□□ 1.35
ATP6V0A4Q9HBG4 C19orf84-201ENST00000570516 788 ntAPPRIS ALT2 TSL 1 (best) BASIC23.49■■□□□ 1.35
ATP6V0A4Q9HBG4 FP565260.3-201ENST00000612610 1162 ntAPPRIS P5 TSL 1 (best) BASIC23.49■■□□□ 1.35
ATP6V0A4Q9HBG4 G6PD-202ENST00000393562 2631 ntAPPRIS P3 TSL 1 (best) BASIC23.49■■□□□ 1.35
ATP6V0A4Q9HBG4 G6PD-211ENST00000621232 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC23.49■■□□□ 1.35
ATP6V0A4Q9HBG4 ACAA1-202ENST00000333167 1785 ntAPPRIS P1 TSL 1 (best) BASIC23.49■■□□□ 1.35
ATP6V0A4Q9HBG4 TTYH1-203ENST00000376531 1763 ntTSL 1 (best) BASIC23.49■■□□□ 1.35
ATP6V0A4Q9HBG4 CTU2-202ENST00000453996 1751 ntAPPRIS ALT2 TSL 1 (best) BASIC23.49■■□□□ 1.35
ATP6V0A4Q9HBG4 AMER2-202ENST00000515384 3197 ntAPPRIS P1 BASIC23.49■■□□□ 1.35
ATP6V0A4Q9HBG4 C19orf67-203ENST00000548523 1427 ntAPPRIS P2 TSL 5 BASIC23.49■■□□□ 1.35
ATP6V0A4Q9HBG4 C10orf95-201ENST00000625129 1469 ntAPPRIS P1 TSL 1 (best) BASIC23.49■■□□□ 1.35
ATP6V0A4Q9HBG4 AL024507.2-201ENST00000606070 2574 ntBASIC23.48■■□□□ 1.35
ATP6V0A4Q9HBG4 SLC25A42-201ENST00000318596 3120 ntAPPRIS P1 TSL 1 (best) BASIC23.48■■□□□ 1.35
ATP6V0A4Q9HBG4 FIZ1-201ENST00000221665 2660 ntAPPRIS P1 TSL 1 (best) BASIC23.48■■□□□ 1.35
ATP6V0A4Q9HBG4 PFKFB3-216ENST00000625260 1752 ntAPPRIS ALT1 TSL 5 BASIC23.48■■□□□ 1.35
ATP6V0A4Q9HBG4 MGAT4D-208ENST00000515354 1806 ntTSL 3 BASIC23.48■■□□□ 1.35
ATP6V0A4Q9HBG4 CROCCP5-201ENST00000436658 830 ntBASIC23.48■■□□□ 1.35
ATP6V0A4Q9HBG4 TRAPPC3-208ENST00000616074 1114 ntTSL 5 BASIC23.48■■□□□ 1.35
ATP6V0A4Q9HBG4 LAMP5-AS1-201ENST00000443469 1928 ntTSL 2 BASIC23.48■■□□□ 1.35
ATP6V0A4Q9HBG4 EPS8L1-202ENST00000245618 2198 ntTSL 1 (best) BASIC23.48■■□□□ 1.35
ATP6V0A4Q9HBG4 CXCL16-203ENST00000574412 1668 ntAPPRIS P2 TSL 1 (best) BASIC23.48■■□□□ 1.35
ATP6V0A4Q9HBG4 C16orf58-209ENST00000567994 1845 ntTSL 5 BASIC23.47■■□□□ 1.35
ATP6V0A4Q9HBG4 AFDN-AS1-201ENST00000359760 2238 ntTSL 1 (best) BASIC23.47■■□□□ 1.35
ATP6V0A4Q9HBG4 NT5C-201ENST00000245552 954 ntAPPRIS P1 TSL 1 (best) BASIC23.47■■□□□ 1.35
ATP6V0A4Q9HBG4 DTYMK-201ENST00000305784 1232 ntAPPRIS P1 TSL 1 (best) BASIC23.47■■□□□ 1.35
ATP6V0A4Q9HBG4 MAP2K4P1-201ENST00000438453 1195 ntBASIC23.47■■□□□ 1.35
ATP6V0A4Q9HBG4 LOXL1-AS1-208ENST00000565756 885 ntTSL 2 BASIC23.47■■□□□ 1.35
ATP6V0A4Q9HBG4 SNAP23-214ENST00000567094 834 ntTSL 3 BASIC23.47■■□□□ 1.35
ATP6V0A4Q9HBG4 UBE2DNL-204ENST00000602536 740 ntBASIC23.47■■□□□ 1.35
ATP6V0A4Q9HBG4 MDK-213ENST00000617138 635 ntTSL 2 BASIC23.47■■□□□ 1.35
ATP6V0A4Q9HBG4 CDR2-201ENST00000268383 2702 ntAPPRIS P1 TSL 1 (best) BASIC23.47■■□□□ 1.35
ATP6V0A4Q9HBG4 USP45-202ENST00000329966 1444 ntTSL 1 (best) BASIC23.47■■□□□ 1.35
ATP6V0A4Q9HBG4 COMMD5-207ENST00000543949 1571 ntAPPRIS P1 TSL 3 BASIC23.47■■□□□ 1.35
ATP6V0A4Q9HBG4 CCDC106-207ENST00000591578 1592 ntAPPRIS P1 TSL 1 (best) BASIC23.47■■□□□ 1.35
ATP6V0A4Q9HBG4 MRAS-202ENST00000423968 1803 ntAPPRIS P1 TSL 1 (best) BASIC23.47■■□□□ 1.35
ATP6V0A4Q9HBG4 TRIM3-201ENST00000345851 2879 ntAPPRIS P1 TSL 1 (best) BASIC23.46■■□□□ 1.35
ATP6V0A4Q9HBG4 NKX2-4-201ENST00000351817 2238 ntAPPRIS P1 TSL 5 BASIC23.46■■□□□ 1.35
ATP6V0A4Q9HBG4 LIMS2-202ENST00000355119 2045 ntAPPRIS ALT1 TSL 1 (best) BASIC23.46■■□□□ 1.35
ATP6V0A4Q9HBG4 SLC4A3-203ENST00000358055 4454 ntAPPRIS P1 TSL 1 (best) BASIC23.46■■□□□ 1.35
ATP6V0A4Q9HBG4 LINC01816-201ENST00000414141 662 ntTSL 1 (best) BASIC23.46■■□□□ 1.35
Retrieved 100 of 98,524 protein–RNA pairs in 28.9 ms