Protein–RNA interactions for Protein: Q9H270

VPS11, Vacuolar protein sorting-associated protein 11 homolog, humanhuman

Predictions only

Length 941 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11Q9H270 CLN5-201ENST00000377453 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC21.21■□□□□ 0.99
VPS11Q9H270 ZNF513-202ENST00000407879 2077 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
VPS11Q9H270 TRIR-205ENST00000592273 783 ntTSL 3 BASIC21.21■□□□□ 0.99
VPS11Q9H270 ALX3-201ENST00000369792 1859 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
VPS11Q9H270 SMIM11B-205ENST00000624304 1863 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
VPS11Q9H270 NNT-AS1-206ENST00000606697 1945 ntTSL 2 BASIC21.21■□□□□ 0.99
VPS11Q9H270 KLC2-207ENST00000421552 2721 ntTSL 5 BASIC21.2■□□□□ 0.99
VPS11Q9H270 BCAM-201ENST00000270233 2402 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.99
VPS11Q9H270 NTRK3-206ENST00000540489 2145 ntTSL 5 BASIC21.2■□□□□ 0.98
VPS11Q9H270 C10orf91-202ENST00000392630 1846 ntTSL 2 BASIC21.2■□□□□ 0.98
VPS11Q9H270 HLA-C-201ENST00000376228 1536 ntAPPRIS P2 BASIC21.2■□□□□ 0.98
VPS11Q9H270 RAVER2-201ENST00000294428 4398 ntAPPRIS ALT2 TSL 5 BASIC21.2■□□□□ 0.98
VPS11Q9H270 JPT1-206ENST00000476258 2289 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
VPS11Q9H270 UBE2C-202ENST00000335046 737 ntTSL 2 BASIC21.2■□□□□ 0.98
VPS11Q9H270 CTAG1B-202ENST00000359887 998 ntTSL 2 BASIC21.2■□□□□ 0.98
VPS11Q9H270 SRR-208ENST00000576848 588 ntTSL 4 BASIC21.2■□□□□ 0.98
VPS11Q9H270 DYM-203ENST00000442713 2147 ntTSL 2 BASIC21.2■□□□□ 0.98
VPS11Q9H270 PKMYT1-201ENST00000262300 2171 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
VPS11Q9H270 C7orf26-201ENST00000344417 2182 ntAPPRIS P1 TSL 2 BASIC21.2■□□□□ 0.98
VPS11Q9H270 YTHDF3-214ENST00000621890 2296 ntTSL 5 BASIC21.2■□□□□ 0.98
VPS11Q9H270 BRSK2-208ENST00000528841 3586 ntAPPRIS ALT2 TSL 1 (best) BASIC21.2■□□□□ 0.98
VPS11Q9H270 HGH1-201ENST00000347708 2531 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
VPS11Q9H270 MEIS3-202ENST00000441740 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC21.19■□□□□ 0.98
VPS11Q9H270 CARD19-201ENST00000375464 855 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
VPS11Q9H270 HES6-206ENST00000409574 738 ntTSL 2 BASIC21.19■□□□□ 0.98
VPS11Q9H270 SNAI3-AS1-201ENST00000563261 998 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
VPS11Q9H270 HOXA11-AS1_1.1-201ENST00000613939 98 ntBASIC21.19■□□□□ 0.98
VPS11Q9H270 AC091982.4-201ENST00000623943 726 ntTSL 2 BASIC21.19■□□□□ 0.98
VPS11Q9H270 HAUS7-211ENST00000626181 414 ntAPPRIS ALT2 TSL 5 BASIC21.19■□□□□ 0.98
VPS11Q9H270 STARD3NL-202ENST00000396013 1365 ntAPPRIS P1 TSL 5 BASIC21.19■□□□□ 0.98
VPS11Q9H270 KCNH2-201ENST00000262186 4286 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
VPS11Q9H270 NRXN2-201ENST00000265459 6621 ntAPPRIS P3 TSL 5 BASIC21.19■□□□□ 0.98
VPS11Q9H270 CTNND2-201ENST00000304623 5481 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
VPS11Q9H270 MAPT-203ENST00000340799 5724 ntAPPRIS ALT2 TSL 1 (best) BASIC21.18■□□□□ 0.98
VPS11Q9H270 BASP1-203ENST00000616743 1711 ntAPPRIS P1 TSL 3 BASIC21.18■□□□□ 0.98
VPS11Q9H270 NDOR1-201ENST00000344894 1794 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
VPS11Q9H270 CDC14A-203ENST00000370124 1883 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
VPS11Q9H270 UBE2H-201ENST00000355621 5151 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
VPS11Q9H270 PCED1A-202ENST00000360652 2016 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
VPS11Q9H270 E4F1-206ENST00000565090 2028 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
VPS11Q9H270 ZNF773-204ENST00000598770 2019 ntAPPRIS ALT2 TSL 2 BASIC21.18■□□□□ 0.98
VPS11Q9H270 MATN4-204ENST00000372756 2077 ntAPPRIS P2 TSL 1 (best) BASIC21.18■□□□□ 0.98
VPS11Q9H270 P2RX2-205ENST00000352418 1200 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
VPS11Q9H270 SURF2-201ENST00000371964 842 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
VPS11Q9H270 SERBP1P1-201ENST00000396021 1160 ntBASIC21.18■□□□□ 0.98
VPS11Q9H270 UBE2E2-203ENST00000425792 1248 ntAPPRIS P1 TSL 2 BASIC21.18■□□□□ 0.98
VPS11Q9H270 SHISA9-205ENST00000639941 1135 ntAPPRIS ALT2 TSL 5 BASIC21.18■□□□□ 0.98
VPS11Q9H270 AKR7A2-201ENST00000235835 1362 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
VPS11Q9H270 HMGA2-205ENST00000425208 1444 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
VPS11Q9H270 HAUS4-201ENST00000206474 1642 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
VPS11Q9H270 SMPD2-201ENST00000258052 1645 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
VPS11Q9H270 SMUG1-215ENST00000508394 1697 ntAPPRIS P1 TSL 2 BASIC21.18■□□□□ 0.98
VPS11Q9H270 RNF38-204ENST00000357058 5254 ntAPPRIS P1 TSL 5 BASIC21.18■□□□□ 0.98
VPS11Q9H270 ERLEC1-203ENST00000405123 1756 ntTSL 5 BASIC21.18■□□□□ 0.98
VPS11Q9H270 FOXD4L3-201ENST00000342833 2039 ntAPPRIS P1 BASIC21.17■□□□□ 0.98
VPS11Q9H270 ANKLE1-204ENST00000594072 2294 ntTSL 5 BASIC21.17■□□□□ 0.98
VPS11Q9H270 NEU4-202ENST00000391969 2526 ntAPPRIS P1 TSL 2 BASIC21.17■□□□□ 0.98
VPS11Q9H270 USP36-203ENST00000542802 6063 ntAPPRIS P2 TSL 1 (best) BASIC21.17■□□□□ 0.98
VPS11Q9H270 TNFRSF25-201ENST00000348333 1119 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
VPS11Q9H270 TNFRSF25-202ENST00000351748 705 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
VPS11Q9H270 TSKS-202ENST00000358830 1367 ntAPPRIS ALT2 TSL 1 (best) BASIC21.17■□□□□ 0.98
VPS11Q9H270 CENPS-CORT-201ENST00000400900 1469 ntTSL 2 BASIC21.17■□□□□ 0.98
VPS11Q9H270 SYT6-210ENST00000641643 1587 ntBASIC21.17■□□□□ 0.98
VPS11Q9H270 TPM1-204ENST00000334895 1637 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
VPS11Q9H270 WTAP-201ENST00000337387 1622 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
VPS11Q9H270 NDUFAF6-203ENST00000396124 1798 ntAPPRIS P1 TSL 2 BASIC21.17■□□□□ 0.98
VPS11Q9H270 AL049796.1-201ENST00000565336 1766 ntBASIC21.17■□□□□ 0.98
VPS11Q9H270 RLBP1-201ENST00000268125 1810 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
VPS11Q9H270 TXNRD3-204ENST00000640433 1932 ntAPPRIS P4 TSL 1 (best) BASIC21.17■□□□□ 0.98
VPS11Q9H270 TAF6L-201ENST00000294168 2116 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
VPS11Q9H270 MGAT4B-201ENST00000292591 2446 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
VPS11Q9H270 SLC17A7-201ENST00000221485 2973 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
VPS11Q9H270 NAE1-203ENST00000379463 1909 ntTSL 2 BASIC21.16■□□□□ 0.98
VPS11Q9H270 QPCT-201ENST00000338415 1739 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
VPS11Q9H270 AP004607.7-201ENST00000527152 1677 ntBASIC21.16■□□□□ 0.98
VPS11Q9H270 C4orf36-201ENST00000295898 881 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
VPS11Q9H270 C9orf47-202ENST00000375850 859 ntAPPRIS ALT2 TSL 3 BASIC21.16■□□□□ 0.98
VPS11Q9H270 YJEFN3-201ENST00000436027 878 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
VPS11Q9H270 AC007009.1-201ENST00000458624 429 ntTSL 2 BASIC21.16■□□□□ 0.98
VPS11Q9H270 SSR2-210ENST00000480567 895 ntAPPRIS P1 TSL 2 BASIC21.16■□□□□ 0.98
VPS11Q9H270 KCNS3-201ENST00000304101 2333 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
VPS11Q9H270 ARHGAP11A-205ENST00000563864 2279 ntTSL 5 BASIC21.16■□□□□ 0.98
VPS11Q9H270 FBLN5-202ENST00000342058 2123 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
VPS11Q9H270 TRABD2A-203ENST00000409520 1975 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
VPS11Q9H270 CXCR3-201ENST00000373691 1861 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
VPS11Q9H270 FARSA-201ENST00000314606 1814 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
VPS11Q9H270 CREB3-201ENST00000353704 1832 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
VPS11Q9H270 HMBS-201ENST00000278715 1501 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
VPS11Q9H270 SMIM19-203ENST00000417410 1466 ntAPPRIS P1 TSL 2 BASIC21.15■□□□□ 0.98
VPS11Q9H270 SNCB-206ENST00000614675 1407 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
VPS11Q9H270 POLR3GL-201ENST00000369313 818 ntTSL 2 BASIC21.15■□□□□ 0.98
VPS11Q9H270 AL034346.1-201ENST00000568244 1277 ntBASIC21.15■□□□□ 0.98
VPS11Q9H270 AC007448.3-201ENST00000585193 689 ntTSL 2 BASIC21.15■□□□□ 0.98
VPS11Q9H270 FAM228B-208ENST00000613899 1238 ntAPPRIS ALT2 TSL 1 (best) BASIC21.15■□□□□ 0.98
VPS11Q9H270 ADAMTS2-202ENST00000274609 2044 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
VPS11Q9H270 GRINA-201ENST00000313269 1968 ntAPPRIS P1 TSL 5 BASIC21.15■□□□□ 0.98
VPS11Q9H270 EYA2-202ENST00000327619 2702 ntAPPRIS P1 TSL 2 BASIC21.15■□□□□ 0.98
VPS11Q9H270 NR6A1-202ENST00000373584 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC21.15■□□□□ 0.98
VPS11Q9H270 POMGNT2-202ENST00000441964 2531 ntAPPRIS P1 TSL 4 BASIC21.15■□□□□ 0.98
VPS11Q9H270 DET1-201ENST00000268148 2267 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Retrieved 100 of 98,524 protein–RNA pairs in 23.3 ms